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pC-SUR-YR
(Plasmid #61768)

Ordering

Item Catalog # Description Quantity Price (USD)
Plasmid 61768 Standard format: Plasmid sent in bacteria as agar stab 1 $85

This material is available to academics and nonprofits only.

Backbone

  • Vector backbone
    pCAMBIA-0380
  • Backbone manufacturer
    CAMBIA
  • Backbone size w/o insert (bp) 6812
  • Total vector size (bp) 12187
  • Modifications to backbone
    The hygromycin gene in ternary vector pC-HYG-YR (Addgene plasmid# 61765) was replaced with the sulfonylurea (chlorimuron ethyl) resistant gene ILV2SUR (GenBank AF013601), which is a mutated allele of the Magnaporthe oryzae ILV2 gene, to construct pC-SUR-YR.
  • Vector type
    Ternary vector for Agrobacterium mediated transformation of fungi
  • Selectable markers
    Sulfonylurea resistance

Growth in Bacteria

  • Bacterial Resistance(s)
    Kanamycin, 50 μg/mL
  • Growth Temperature
    37°C
  • Growth Strain(s)
    DH5alpha
  • Copy number
    High Copy

Gene/Insert 1

  • Gene/Insert name
    Sur gene
  • Alt name
    sulfonylurea resistance gene
  • Alt name
    chlorimuron ethyl resistance gene
  • Species
    Magnaporthe oryzae
  • Insert Size (bp)
    2474
  • GenBank ID
    AF013601.1
  • Promoter Magnaporthe oryzae ILV promoter

Cloning Information for Gene/Insert 1

  • Cloning method Restriction Enzyme
  • 5′ cloning site EcoRI (not destroyed)
  • 3′ cloning site HindIII (not destroyed)
  • 5′ sequencing primer LB-F1 (5'-gtggtgtaaacaaattgacgc-3')
  • 3′ sequencing primer RB-F1 (5'-ggataaaccttttcacgccc-3')
  • (Common Sequencing Primers)

Gene/Insert 2

  • Gene/Insert name
    2 micron origin or replication and URA3 gene for S. cerevisiae
  • Species
    S. cerevisiae (budding yeast)
  • Insert Size (bp)
    2487
  • GenBank ID
    KC562906.1

Cloning Information for Gene/Insert 2

  • Cloning method Restriction Enzyme
  • 5′ cloning site SacII (not destroyed)
  • 3′ cloning site SacII (not destroyed)
  • 5′ sequencing primer ccgcggTTAGTTTTGCTGGCCGCATC
  • 3′ sequencing primer ccgcggCGCTTCCACAAACATTGCTC
  • (Common Sequencing Primers)

Resource Information

  • Supplemental Documents
  • A portion of this plasmid was derived from a plasmid made by
    SUR gene was cloned from pCB1532 (Sweigard et al., 1997)

Terms and Licenses

  • Academic/Nonprofit Terms
  • Industry Terms
    • Not Available to Industry
Trademarks:
  • Zeocin® is an InvivoGen trademark.

Depositor Comments

SUR gene and its promoter was amplified from cloning vector pCB1532 (Sweigard et al., 1997. Fungal Genetics Newsletter 44: 52-53 http://www.fgsc.net/fgn44/sweig.html) and recombined into pC-HYG-YR (Addgene plasmid# 61765) through yeast recombineering to replace hygromycin gene and create pC-SUR-YR.

Restriction sites EcoRI and HindIII can be used to linearise the vector inside left (LB) and right (RB) borders of the TDNA. Note that the promoter and SUR sequences are present within the EcoRI and HindII cloning sites.

See Supplementary Fig. S1. of associated publication for schematic of single step assembly of gene deletion ternary vectors using yeast recombinational cloning.

How to cite this plasmid ( Back to top)

These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.

  • For your Materials & Methods section:

    pC-SUR-YR was a gift from Ken Haynes (Addgene plasmid # 61768 ; http://n2t.net/addgene:61768 ; RRID:Addgene_61768)
  • For your References section:

    Exploitation of sulfonylurea resistance marker and non-homologous end joining mutants for functional analysis in Zymoseptoria tritici. Sidhu YS, Cairns TC, Chaudhari YK, Usher J, Talbot NJ, Studholme DJ, Csukai M, Haynes K. Fungal Genet Biol. 2015 Jun;79:102-9. doi: 10.1016/j.fgb.2015.04.015. 10.1016/j.fgb.2015.04.015 PubMed 26092796