Karel Svoboda Lab Plasmids


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Title Authors Publication
Long-Range Neuronal Circuits Underlying the Interaction between Sensory and Motor Cortex. Mao T, Kusefoglu D, Hooks BM, Huber D, Petreanu L, Svoboda K Neuron. 2011 Oct 6;72(1):111-23.
The subcellular organization of neocortical excitatory connections. Leopoldo Petreanu, Tianyi Mao, Scott M. Sternson & Karel Svoboda Nature. 2009 Jan 18.
A genetically encoded fluorescent sensor of ERK activity Harvey CD, Ehrhardt AG, Cellurale C, Zhong H, Yasuda R, Davis RJ, Svoboda K. PNAS 2008 Dec 9;105(49):19264-9
Characterization and subcellular targeting of GCaMP-type genetically-encoded calcium indicators. Mao T, O'Connor DH, Scheuss V, Nakai J, Svoboda K PLoS ONE. 2008 . 3(3):e1796.
Channelrhodopsin-2-assisted circuit mapping of long-range callosal projections. Petreanu L, Huber D, Sobczyk A, Svoboda K Nat Neurosci. 2007 May . 10(5):663-8.
Supersensitive Ras activation in dendrites and spines revealed by two-photon fluorescence lifetime imaging. Yasuda R, Harvey CD, Zhong H, Sobczyk A, van Aelst L, Svoboda K Nat Neurosci. 2006 Feb . 9(2):283-91.
hSyn1-FLEX-hChR2-tdtomato (unpublished)
Spatial spread of Ras activity (unpublished)
ID Plasmid Gene/Insert Vector Type Publication Hidden Extra Search Info  
15753 pCAGGS-ChR2-Venus Channelrhodopsin2-Venus Mammalian Expression Petreanu et al Nat Neurosci. 2007 May . 10(5):663-8. pCAGGS
18662 mEGFP-HRas H-Ras (Homo sapiens) Mammalian Expression Yasuda et al Nat Neurosci. 2006 Feb . 9(2):283-91. pCI HRAS C-BAS/HAS, C-H-RAS, C-HA-RAS1, CTLO, H-RASIDX, HAMSV, HRAS1, RASH1, p21ras
18664 mRFP-RBD(R59A)-mRFP Ras binding domain of Raf Mammalian Expression Yasuda et al Nat Neurosci. 2006 Feb . 9(2):283-91. pCI
18665 mEGFP-HRas S17N H-Ras (Homo sapiens) Mammalian Expression Yasuda et al Nat Neurosci. 2006 Feb . 9(2):283-91. pCI HRAS C-BAS/HAS, C-H-RAS, C-HA-RAS1, CTLO, H-RASIDX, HAMSV, HRAS1, RASH1, p21ras
18666 mEGFP-HRas G12V H-Ras (Homo sapiens) Mammalian Expression Yasuda et al Nat Neurosci. 2006 Feb . 9(2):283-91. pCI HRAS C-BAS/HAS, C-H-RAS, C-HA-RAS1, CTLO, H-RASIDX, HAMSV, HRAS1, RASH1, p21ras
18679 cytoplasmic EKAR (Cerulean-Venus) ERK Activity Reporter Mammalian Expression Harvey et al PNAS 2008 Dec 9;105(49):19264-9 pRK5
18680 cytoplasmic EKAR (EGFP-mRFP) ERK Activity Reporter Mammalian Expression Harvey et al PNAS 2008 Dec 9;105(49):19264-9 pCI
18681 nuclear EKAR (Cerulean-Venus) ERK Activity Reporter Mammalian Expression Harvey et al PNAS 2008 Dec 9;105(49):19264-9 pRK5
18682 nuclear EKAR (EGFP-mRFP) ERK Activity Reporter Mammalian Expression Harvey et al PNAS 2008 Dec 9;105(49):19264-9 pCI
18693 paGFP-HRas H-Ras (Homo sapiens) Mammalian Expression Spatial spread of Ras activity (unpublished) pCI HRAS C-BAS/HAS, C-H-RAS, C-HA-RAS1, CTLO, H-RASIDX, HAMSV, HRAS1, RASH1, p21ras
18694 paGFP-HRas G12V H-Ras G12V (Homo sapiens) Mammalian Expression Spatial spread of Ras activity (unpublished) pCI HRAS C-BAS/HAS, C-H-RAS, C-HA-RAS1, CTLO, H-RASIDX, HAMSV, HRAS1, RASH1, p21ras
18695 MARCKS(1-40)-paGFP MARCKS(1-40) (Homo sapiens) Mammalian Expression Spatial spread of Ras activity (unpublished) pRK5
18696 mEGFP monomeric EGFP Mammalian Expression Spatial spread of Ras activity (unpublished) pRK5
18697 paGFP photoactivatable GFP Mammalian Expression Spatial spread of Ras activity (unpublished) pRK5
18926 pCAGGS-GCaMP2 GCaMP2 Mammalian Expression Mao et al PLoS ONE. 2008 . 3(3):e1796. pCAGGS
18927 CMV-GCaMP2 GCaMP2 Mammalian Expression Mao et al PLoS ONE. 2008 . 3(3):e1796. pCMV
18928 pCAGGS-GCaMP2-actin GCaMP2-Actin (Gallus gallus) Mammalian Expression Mao et al PLoS ONE. 2008 . 3(3):e1796. pCAGGS ACTB RCJMB04_4h19, Bact
18931 pCAGGS-PSD95-GCaMP2 PSD95-GCaMP2 (Rattus norvegicus) Mammalian Expression Mao et al PLoS ONE. 2008 . 3(3):e1796. pCAGGS Dlg4 Dlgh4, PSD95, Sap90
18932 pCAGGS-hCD4-GCaMP2 hCD4-GCaMP2 (Homo sapiens) Mammalian Expression Mao et al PLoS ONE. 2008 . 3(3):e1796. pCAGGS CD4 CD4mut
20071 pACAGW-ChR2-Venus-AAV Channelrhodopsin-2 Mammalian Expression ; AAV Leopoldo et al Nature. 2009 Jan 18. N/A COP4 CHLREDRAFT_182032
28014 AAV-CAG-GFP eGFP adeno associate viral Mao et al Neuron. 2011 Oct 6;72(1):111-23. AAV2/1
28015 AAV-CAG-hChR2_tdTomato humanized ChR2-tdTomato adeno associate viral Mao et al Neuron. 2011 Oct 6;72(1):111-23. AAV2/1
28017 AAV-CAG-hChR2-H134R-tdTomato humanized ChR2-H134R-tdTomato adeno associate viral Mao et al Neuron. 2011 Oct 6;72(1):111-23. AAV2/1
41015 hSyn1-FLEX-hChR2-tdtomato Channelrhodopsin-2 Mammalian Expression, Adenoviral hSyn1-FLEX-hChR2-tdtomato (unpublished) pAAV (Adeno-associated Virus)