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Browse > Patrick Aebischer > Szulc et al > pLVPT-tTR-KRAB
Plasmid 11642: pLVPT-tTR-KRAB
Gene/insert name: mPGK, GFP, tTR-KRAB, Tet-on
Insert size (bp): Unknown
Vector backbone: None
(Search Vector Database)
Type of vector: Mammalian expression,Lentiviral
Backbone size (bp): 11640
5' Sequencing primer: See map  (List of Sequencing Primers)
Bacteria resistance: Ampicillin
High or low copy: High Copy
Grow in standard E. coli @ 37C: No
Please specify bacterial strain for growth and growth condition: Use Stbl3 or HB101 to reduce chance of recombination. Grow at 37C
Sequence:View sequence
Author's Map:View map
Plasmid Provided In:Stbl3
Principal Investigator:Patrick Aebischer
Terms and Licenses:MTA, Tet Systems LULL

Comments: Transgenes can be expressed from any RNA Pol II promoter as part of bicistronic unit comprising the KRAB-based repressor; tetO sequences are inserted into the vector LTR. Tet-on and Tet-off versions rely on repressors that bind in the absence or the presence of doxycycline, respectively. Addition of Pol III promoter-small hairpin RNA cassette allows for drug-controllable RNA interference (Tet-on shRNA).

Cloning shRNA into pLVET, pLVCT, and pLVPT vectors: first clone shRNA into pLVTHM downstream of the tetO-H1 region. Then cut pLVTHM containing your shRNA with MscI-FspI and clone the insert containing the 3'LTR to target plasmid opened with MscI-FspI. FspI cuts into AmpR. This means for inverted clones AmpR will not be restored; after selection you will be left with clones with the shRNA cassette and functional AmpR.

pLVTHM and packaging plasmid for this system are also available at Addgene (http://www.addgene.org/rnaitools). Please visit Trono lab website (http://tronolab.epfl.ch) to see frequently asked questions on cloning strategies and packaging. You may also visit LentiWeb (http://www.lentiweb.com) for discussion on cloning strategies and protocols.

Addgene has sequenced a portion of this plasmid for verification. Click here for the sequencing result.

Click on map to enlarge

Selected features
HIV-1_5_LTR 466 - 646
truncHIV-1_3_LTR 466 - 646
HIV-1_psi_pack 757 - 801
RRE 1311 - 1544
ORF frame 3 1650 - 2312
cPPT 2043 - 2058
MSCV_rev_primer 2253 - 2230
mPGK_F_primer 2627 - 2646
EGFP_N_primer 2817 - 2796
EGFP 2751 - 3467
ORF frame 3 2751 - 3500
EGFP_C_primer 3404 - 3425
IRES 3551 - 4054
TetR 4132 - 4731
ORF frame 1 4117 - 5124
pBluescriptKS_primer 5211 - 5195
WPRE 5233 - 5820
cPPT 5891 - 5906
U3PPT 5891 - 5912
TRE 5943 - 6230
HIV-1_5_LTR 6266 - 6446
truncHIV-1_3_LTR 6266 - 6446
Sp6_primer 6489 - 6472
pBRrevBam_primer 6798 - 6779
tet(564-300) 6990 - 6727
pGEX_3_primer 7131 - 7153
AmpR_promoter 7312 - 7340
ORF frame 2 7382 - 8242
Ampicillin 7382 - 8242
pBR322_origin 8397 - 9016
pBABE_3_primer 9262 - 9242
SV40_enhancer 9463 - 9248
SV40_promoter 9260 - 9528
SV40_origin 9427 - 9504
SV40_promoter 9380 - 9582
SV40pro_F_primer 9489 - 9508
SV40_int 10709 - 10724
SV40_3_splice 10730 - 10777
SV40_PA_terminator 11353 - 11484
EBV_rev_primer 11441 - 11460
Unique restriction sites

NotI 1156
EagI 1156
BamHI 2705
SmaI 3531
PstI 3539
SacII 5734
MscI 5833
XhoI 5943
XbaI 6450
FspI 7946

Article: A versatile tool for conditional gene expression and knockdown. Szulc J et al. (Nat Methods. 2006 Feb . 3(2):109-16. Pubmed)

Please acknowledge the principal investigator and cite this article if you use this plasmid in a publication.

Also, please include the text "Addgene plasmid 11642" in your Materials and Methods section. This information allows Addgene to create a link from the plasmid page to your publication.

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