| Selected features |
| SV40pro_F_primer | | 59 - 40 |  | SV40pro_F_primer |  | tatttatgcagaggccgagg
|
|
| CAG_enhancer | | 241 - 528 |  | CAG_enhancer |  | acataacttacggtaaatggcccgcctggctgaccgcccaacgacccccgcccattgacg tcaataatgacgtatgttcccatagtaacgccaatagggactttccattgacgtcaatgg gtggagtatttacggtaaactgcccacttggcagtacatcaagtgtatcatatgccaagt acgccccctattgacgtcaatgacggtaaatggcccgcctggcattatgcccagtacatg accttatgggactttcctacttggcagtacatctacgtattagtcatc
|
|
| CMV_immearly_promoter | | 162 - 738 |  | CMV_immearly_promoter |  | acattgattattgactagttattaatagtaatcaattacggggtcattagttcatagccc atatatggagttccgcgttacataacttacggtaaatggcccgcctggctgaccgcccaa cgacccccgcccattgacgtcaataatgacgtatgttcccatagtaacgccaatagggac tttccattgacgtcaatgggtggagtatttacggtaaactgcccacttggcagtacatca agtgtatcatatgccaagtacgccccctattgacgtcaatgacggtaaatggcccgcctg gcattatgcccagtacatgaccttatgggactttcctacttggcagtacatctacgtatt agtcatcgctattaccatggtgatgcggttttggcagtacatcaatgggcgtggatagcg gtttgactcacggggatttccaagtctccaccccattgacgtcaatgggagtttgttttg gcaccaaaatcaacgggactttccaaaatgtcgtaacaactccgccccattgacgcaaat gggcggtaggcgtgtacggtgggaggtctatataagc
|
|
| CMV_fwd_primer | | 695 - 715 |  | CMV_fwd_primer |  | cgcaaatgggcggtaggcgtg
|
|
| CMV_promoter | | 696 - 765 |  | CMV_promoter |  | gcaaatgggcggtaggcgtgtacggtgggaggtctatataagcagagctcgtttagtgaa ccgtcagatc
|
|
| pCEP_fwd_primer | | 739 - 758 |  | pCEP_fwd_primer |  | agagctcgtttagtgaaccg
|
|
| LNCX_primer | | 741 - 765 |  | LNCX_primer |  | agctcgtttagtgaaccgtcagatc
|
|
| CMV2_promoter | | 708 - 827 |  | CMV2_promoter |  | taggcgtgtacggtgggaggtctatataagcagagctcgtttagtgaaccgtcagatcgc ctggagacgccatccacgctgttttgacctccatagaagacaccgggaccgatccagcct
|
|
| bGlob_int | | 1015 - 1398 |  | bGlob_int |  | ctttcttcttttaatatacttttttgtttatcttatttctaatactttccctaatctctt tctttcagggcaataatgatacaatgtatcatgcctctttgcaccattctaaagaataac agtgataatttctgggttaaggcaatagcaatatttctgcatataaatatttctgcatat aaattgtaactgatgtaagaggtttcatattgctaatagcagctacaatccagctaccat tctgcttttattttatggttgggataaggctggattattctgagtccaagctaggccctt ttgctaatcatgttcatacctcttatcttcctcccacagctcctgggcaacgtgctggtc tgtgtgctggcccatcactttggc
|
|
| ORF frame 3 | | 1437 - 2945 |  | ORF frame 3 |  | atgggtgcgagagcgtcagtattaagcgggggagaattagatcgatgggaaaaaattcgg ttaaggccagggggaaagaaaaaatataaattaaaacatatagtatgggcaagcagggag ctagaacgattcgcagttaatcctggcctgttagaaacatcagaaggctgtagacaaata ctgggacagctacaaccatcccttcagacaggatcagaagaacttagatcattatataat acagtagcaaccctctattgtgtgcatcaaaggatagagataaaagacaccaaggaagct ttagacaagatagaggaagagcaaaacaaaagtaagaaaaaagcacagcaagcagcagct gacacaggacacagcaatcaggtcagccaaaattaccctatagtgcagaacatccagggg caaatggtacatcaggccatatcacctagaactttaaatgcatgggtaaaagtagtagaa gagaaggctttcagcccagaagtgatacccatgttttcagcattatcagaaggagccacc ccacaagatttaaacaccatgctaaacacagtggggggacatcaagcagccatgcaaatg ttaaaagagaccatcaatgaggaagctgcagaatgggatagagtgcatccagtgcatgca gggcctattgcaccaggccagatgagagaaccaaggggaagtgacatagcaggaactact agtactagtacccttcaggaacaaataggatggatgacacataatccacctatcccagta ggagaaatctataaaagatggataatcctgggattaaataaaatagtaagaatgtatagc cctaccagcattctggacataagacaaggaccaaaggaaccctttagagactatgtagac cgattctataaaactctaagagccgagcaagcttcacaagaggtaaaaaattggatgaca gaaaccttgttggtccaaaatgcgaacccagattgtaagactattttaaaagcattggga ccaggagcgacactagaagaaatgatgacagcatgtcagggagtggggggacccggccat aaagcaagagttttggctgaagcaatgagccaagtaacaaatccagctaccataatgata cagaaaggcaattttaggaaccaaagaaagactgttaagtgtttcaattgtggcaaagaa gggcacatagccaaaaattgcagggcccctaggaaaaagggctgttggaaatgtggaaag gaaggacaccaaatgaaagattgtactgagagacaggctaattttttagggaagatctgg ccttcccacaagggaaggccagggaattttcttcagagcagaccagagccaacagcccca ccagaagagagcttcaggtttggggaagagacaacaactccctctcagaagcaggagccg atagacaaggaactgtatcctttagcttccctcagatcactctttggcagcgacccctcg tcacaataa
|
|
| Gag_HIV(variant) | | 1437 - 2945 |  | Gag_HIV(variant) |  | atgggtgcgagagcgtcagtattaagcgggggagaattagatcgatgggaaaaaattcgg ttaaggccagggggaaagaaaaaatataaattaaaacatatagtatgggcaagcagggag ctagaacgattcgcagttaatcctggcctgttagaaacatcagaaggctgtagacaaata ctgggacagctacaaccatcccttcagacaggatcagaagaacttagatcattatataat acagtagcaaccctctattgtgtgcatcaaaggatagagataaaagacaccaaggaagct ttagacaagatagaggaagagcaaaacaaaagtaagaaaaaagcacagcaagcagcagct gacacaggacacagcaatcaggtcagccaaaattaccctatagtgcagaacatccagggg caaatggtacatcaggccatatcacctagaactttaaatgcatgggtaaaagtagtagaa gagaaggctttcagcccagaagtgatacccatgttttcagcattatcagaaggagccacc ccacaagatttaaacaccatgctaaacacagtggggggacatcaagcagccatgcaaatg ttaaaagagaccatcaatgaggaagctgcagaatgggatagagtgcatccagtgcatgca gggcctattgcaccaggccagatgagagaaccaaggggaagtgacatagcaggaactact agtactagtacccttcaggaacaaataggatggatgacacataatccacctatcccagta ggagaaatctataaaagatggataatcctgggattaaataaaatagtaagaatgtatagc cctaccagcattctggacataagacaaggaccaaaggaaccctttagagactatgtagac cgattctataaaactctaagagccgagcaagcttcacaagaggtaaaaaattggatgaca gaaaccttgttggtccaaaatgcgaacccagattgtaagactattttaaaagcattggga ccaggagcgacactagaagaaatgatgacagcatgtcagggagtggggggacccggccat aaagcaagagttttggctgaagcaatgagccaagtaacaaatccagctaccataatgata cagaaaggcaattttaggaaccaaagaaagactgttaagtgtttcaattgtggcaaagaa gggcacatagccaaaaattgcagggcccctaggaaaaagggctgttggaaatgtggaaag gaaggacaccaaatgaaagattgtactgagagacaggctaattttttagggaagatctgg ccttcccacaagggaaggccagggaattttcttcagagcagaccagagccaacagcccca ccagaagagagcttcaggtttggggaagagacaacaactccctctcagaagcaggagccg atagacaaggaactgtatcctttagcttccctcagatcactctttggcagcgacccctcg tcacaataa
|
|
| ORF frame 2 | | 3011 - 5749 |  | ORF frame 2 |  | atgaatttgccaggaagatggaaaccaaaaatgatagggggaattggaggttttatcaaa gtaggacagtatgatcagatactcatagaaatctgcggacataaagctataggtacagta ttagtaggacctacacctgtcaacataattggaagaaatctgttgactcagattggctgc actttaaattttcccattagtcctattgagactgtaccagtaaaattaaagccaggaatg gatggcccaaaagttaaacaatggccattgacagaagaaaaaataaaagcattagtagaa atttgtacagaaatggaaaaggaaggaaaaatttcaaaaattgggcctgaaaatccatac aatactccagtatttgccataaagaaaaaagacagtactaaatggagaaaattagtagat ttcagagaacttaataagagaactcaagatttctgggaagttcaattaggaataccacat cctgcagggttaaaacagaaaaaatcagtaacagtactggatgtgggcgatgcatatttt tcagttcccttagataaagacttcaggaagtatactgcatttaccatacctagtataaac aatgagacaccagggattagatatcagtacaatgtgcttccacagggatggaaaggatca ccagcaatattccagtgtagcatgacaaaaatcttagagccttttagaaaacaaaatcca gacatagtcatctatcaatacatggatgatttgtatgtaggatctgacttagaaataggg cagcatagaacaaaaatagaggaactgagacaacatctgttgaggtggggatttaccaca ccagacaaaaaacatcagaaagaacctccattcctttggatgggttatgaactccatcct gataaatggacagtacagcctatagtgctgccagaaaaggacagctggactgtcaatgac atacagaaattagtgggaaaattgaattgggcaagtcagatttatgcagggattaaagta aggcaattatgtaaacttcttaggggaaccaaagcactaacagaagtagtaccactaaca gaagaagcagagctagaactggcagaaaacagggagattctaaaagaaccggtacatgga gtgtattatgacccatcaaaagacttaatagcagaaatacagaagcaggggcaaggccaa tggacatatcaaatttatcaagagccatttaaaaatctgaaaacaggaaaatatgcaaga atgaagggtgcccacactaatgatgtgaaacaattaacagaggcagtacaaaaaatagcc acagaaagcatagtaatatggggaaagactcctaaatttaaattacccatacaaaaggaa acatgggaagcatggtggacagagtattggcaagccacctggattcctgagtgggagttt gtcaatacccctcccttagtgaagttatggtaccagttagagaaagaacccataatagga gcagaaactttctatgtagatggggcagccaatagggaaactaaattaggaaaagcagga tatgtaactgacagaggaagacaaaaagttgtccccctaacggacacaacaaatcagaag actgagttacaagcaattcatctagctttgcaggattcgggattagaagtaaacatagtg acagactcacaatatgcattgggaatcattcaagcacaaccagataagagtgaatcagag ttagtcagtcaaataatagagcagttaataaaaaaggaaaaagtctacctggcatgggta ccagcacacaaaggaattggaggaaatgaacaagtagatgggttggtcagtgctggaatc aggaaagtactatttttagatggaatagataaggcccaagaagaacatgagaaatatcac agtaattggagagcaatggctagtgattttaacctaccacctgtagtagcaaaagaaata gtagccagctgtgataaatgtcagctaaaaggggaagccatgcatggacaagtagactgt agcccaggaatatggcagctagattgtacacatttagaaggaaaagttatcttggtagca gttcatgtagccagtggatatatagaagcagaagtaattccagcagagacagggcaagaa acagcatacttcctcttaaaattagcaggaagatggccagtaaaaacagtacatacagac aatggcagcaatttcaccagtactacagttaaggccgcctgttggtgggcggggatcaag caggaatttggcattccctacaatccccaaagtcaaggagtaatagaatctatgaataaa gaattaaagaaaattataggacaggtaagagatcaggctgaacatcttaagacagcagta caaatggcagtattcatccacaattttaaaagaaaaggggggattggggggtacagtgca ggggaaagaatagtagacataatagcaacagacatacaaactaaagaattacaaaaacaa attacaaaaattcaaaattttcgggtttattacagggacagcagagatccagtttggaaa ggaccagcaaagctcctctggaaaggtgaaggggcagtagtaatacaagataatagtgac ataaaagtagtgccaagaagaaaagcaaagatcatcagggattatggaaaacagatggca ggtgatgattgtgtggcaagtagacaggatgaggattaa
|
|
| cPPT | | 5438 - 5453 |  | cPPT |  | aaaagaaaagggggga
|
|
| RRE | | 5774 - 6007 |  | RRE |  | aggagctttgttccttgggttcttgggagcagcaggaagcactatgggcgcagcctcaat gacgctgacggtacaggccagacaattattgtctggtatagtgcagcagcagaacaattt gctgagggctattgaggcgcaacagcatctgttgcaactcacagtctggggcatcaagca gctccaggcaagaatcctggctgtggaaagatacctaaaggatcaacagctcct
|
|
| pBR322_origin | | 7745 - 7126 |  | pBR322_origin |  | agatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaa aaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttc cgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgt agttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcc tgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagac gatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagccca gcttggagcgaacgacctacaccgaactgagatacctacagcgtgagcattgagaaagcg ccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacag gagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggt ttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctat ggaaaaacgccagcaacgcg
|
|
| ORF frame 1 | | 8760 - 7900 |  | ORF frame 1 |  | atgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcct gtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgca cgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgcccc gaagaacgttttccaatgatgagcacttttaaagttctgctatgtggcgcggtattatcc cgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttg gttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaatta tgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatc ggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgcctt gatcgttgggaaccggagctgaatgaagccataccaaacgacgagcgtgacaccacgatg cctgtagcaatggcaacaacgttgcgcaaactattaactggcgaactacttactctagct tcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgc tcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtct cgcggtatcattgcagcactggggccagatggtaagccctcccgtatcgtagttatctac acgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcc tcactgattaagcattggtaa
|
|
| Ampicillin | | 8760 - 7900 |  | Ampicillin |  | atgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcct gtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgca cgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgcccc gaagaacgttttccaatgatgagcacttttaaagttctgctatgtggcgcggtattatcc cgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttg gttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaatta tgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatc ggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgcctt gatcgttgggaaccggagctgaatgaagccataccaaacgacgagcgtgacaccacgatg cctgtagcaatggcaacaacgttgcgcaaactattaactggcgaactacttactctagct tcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgc tcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtct cgcggtatcattgcagcactggggccagatggtaagccctcccgtatcgtagttatctac acgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcc tcactgattaagcattggtaa
|
|
| AmpR_promoter | | 8830 - 8802 |  | AmpR_promoter |  | ttcaaatatgtatccgctcatgagacaat
|
|