LOCUS       sequence-131050-        5247 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  Cloned region contains Acetobacter aceti 1023 hypothetical protein 
            AZ09_02685, purE(H59D), and purK genes.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 5247)
  AUTHORS   Constantine CZ, Starks CM, Mill CP, Ransome AE, Karpowicz SJ, 
            Francois JA, Goodman RA, Kappock TJ
  TITLE     Biochemical and structural studies of N5-carboxyaminoimidazole 
            ribonucleotide mutase from the acidophilic bacterium Acetobacter 
            aceti.
  JOURNAL   Biochemistry. 2006 Jul 11;45(27):8193-208.
  PUBMED    16819818
REFERENCE   2  (bases 1 to 5247)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: 
            "Biochemistry."; date: "2006-07-11"; volume: "45(27)"; pages: 
            "8193-208"
COMMENT     Sequence Label: pJK347
FEATURES             Location/Qualifiers
     source          1..5247
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     complement(11..28)
                     /label=L4440
                     /note="L4440 vector, forward primer"
     rep_origin      complement(182..770)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     complement(262..281)
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     CDS             complement(join(941..1732,1733..1801))
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     1564..1583
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     promoter        complement(1802..1906)
                     /gene="bla"
                     /label=AmpR promoter
     primer_bind     1974..1992
                     /label=pBRforEco
                     /note="pBR322 vectors, upsteam of EcoRI site, forward 
                     primer"
     primer_bind     complement(2030..2052)
                     /label=pGEX 3'
                     /note="pGEX vectors, reverse primer"
     primer_bind     2152..2171
                     /label=pRS-marker
                     /note="pRS vectors, use to sequence yeast selectable 
                     marker"
     rep_origin      complement(2188..2643)
                     /direction=LEFT
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow 
                     indicates direction of (+) strand synthesis"
     primer_bind     complement(2325..2346)
                     /label=F1ori-F
                     /note="F1 origin, forward primer"
     primer_bind     2537..2556
                     /label=F1ori-R
                     /note="F1 origin, reverse primer"
     primer_bind     2841..2863
                     /label=M13/pUC Forward
                     /note="In lacZ gene"
     primer_bind     2855..2872
                     /label=M13 Forward
                     /note="In lacZ gene. Also called M13-F20 or M13 (-21) 
                     Forward"
     primer_bind     2856..2872
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     RBS             4093..4101
                     /label=Shine-Dalgarno sequence
                     /note="full consensus sequence for ribosome-binding sites 
                     upstream of start codons in E. coli; complementary to a 
                     region in the 3' end of the 16S rRNA (Chen et al., 1994)"
     primer_bind     complement(5027..5043)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     primer_bind     complement(5027..5043)
                     /label=M13 Reverse
                     /note="In lacZ gene. Also called M13-rev"
     primer_bind     complement(5040..5062)
                     /label=M13/pUC Reverse
                     /note="In lacZ gene"
     protein_bind    5051..5067
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(join(5075..5081,5082..5099,5100..5105))
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    5120..5141
                     /label=CAP binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding activates transcription in the presence 
                     of cAMP."
ORIGIN
        1 cttccgcttc ctcgctcact gactcgctgc gctcggtcgt tcggctgcgg cgagcggtat
       61 cagctcactc aaaggcggta atacggttat ccacagaatc aggggataac gcaggaaaga
      121 acatgtgagc aaaaggccag caaaaggcca ggaaccgtaa aaaggccgcg ttgctggcgt
      181 ttttccatag gctccgcccc cctgacgagc atcacaaaaa tcgacgctca agtcagaggt
      241 ggcgaaaccc gacaggacta taaagatacc aggcgtttcc ccctggaagc tccctcgtgc
      301 gctctcctgt tccgaccctg ccgcttaccg gatacctgtc cgcctttctc ccttcgggaa
      361 gcgtggcgct ttctcatagc tcacgctgta ggtatctcag ttcggtgtag gtcgttcgct
      421 ccaagctggg ctgtgtgcac gaaccccccg ttcagcccga ccgctgcgcc ttatccggta
      481 actatcgtct tgagtccaac ccggtaagac acgacttatc gccactggca gcagccactg
      541 gtaacaggat tagcagagcg aggtatgtag gcggtgctac agagttcttg aagtggtggc
      601 ctaactacgg ctacactaga aggacagtat ttggtatctg cgctctgctg aagccagtta
      661 ccttcggaaa aagagttggt agctcttgat ccggcaaaca aaccaccgct ggtagcggtg
      721 gtttttttgt ttgcaagcag cagattacgc gcagaaaaaa aggatctcaa gaagatcctt
      781 tgatcttttc tacggggtct gacgctcagt ggaacgaaaa ctcacgttaa gggattttgg
      841 tcatgagatt atcaaaaagg atcttcacct agatcctttt aaattaaaaa tgaagtttta
      901 aatcaatcta aagtatatat gagtaaactt ggtctgacag ttaccaatgc ttaatcagtg
      961 aggcacctat ctcagcgatc tgtctatttc gttcatccat agttgcctga ctccccgtcg
     1021 tgtagataac tacgatacgg gagggcttac catctggccc cagtgctgca atgataccgc
     1081 gagacccacg ctcaccggct ccagatttat cagcaataaa ccagccagcc ggaagggccg
     1141 agcgcagaag tggtcctgca actttatccg cctccatcca gtctattaat tgttgccggg
     1201 aagctagagt aagtagttcg ccagttaata gtttgcgcaa cgttgttgcc attgctacag
     1261 gcatcgtggt gtcacgctcg tcgtttggta tggcttcatt cagctccggt tcccaacgat
     1321 caaggcgagt tacatgatcc cccatgttgt gcaaaaaagc ggttagctcc ttcggtcctc
     1381 cgatcgttgt cagaagtaag ttggccgcag tgttatcact catggttatg gcagcactgc
     1441 ataattctct tactgtcatg ccatccgtaa gatgcttttc tgtgactggt gagtactcaa
     1501 ccaagtcatt ctgagaatag tgtatgcggc gaccgagttg ctcttgcccg gcgtcaatac
     1561 gggataatac cgcgccacat agcagaactt taaaagtgct catcattgga aaacgttctt
     1621 cggggcgaaa actctcaagg atcttaccgc tgttgagatc cagttcgatg taacccactc
     1681 gtgcacccaa ctgatcttca gcatctttta ctttcaccag cgtttctggg tgagcaaaaa
     1741 caggaaggca aaatgccgca aaaaagggaa taagggcgac acggaaatgt tgaatactca
     1801 tactcttcct ttttcaatat tattgaagca tttatcaggg ttattgtctc atgagcggat
     1861 acatatttga atgtatttag aaaaataaac aaataggggt tccgcgcaca tttccccgaa
     1921 aagtgccacc tgacgtctaa gaaaccatta ttatcatgac attaacctat aaaaataggc
     1981 gtatcacgag gccctttcgt ctcgcgcgtt tcggtgatga cggtgaaaac ctctgacaca
     2041 tgcagctccc ggagacggtc acagcttgtc tgtaagcgga tgccgggagc agacaagccc
     2101 gtcagggcgc gtcagcgggt gttggcgggt gtcggggctg gcttaactat gcggcatcag
     2161 agcagattgt actgagagtg caccataaaa ttgtaaacgt taatattttg ttaaaattcg
     2221 cgttaaattt ttgttaaatc agctcatttt ttaaccaata ggccgaaatc ggcaaaatcc
     2281 cttataaatc aaaagaatag cccgagatag ggttgagtgt tgttccagtt tggaacaaga
     2341 gtccactatt aaagaacgtg gactccaacg tcaaagggcg aaaaaccgtc tatcagggcg
     2401 atggcccact acgtgaacca tcacccaaat caagtttttt ggggtcgagg tgccgtaaag
     2461 cactaaatcg gaaccctaaa gggagccccc gatttagagc ttgacgggga aagccggcga
     2521 acgtggcgag aaaggaaggg aagaaagcga aaggagcggg cgctagggcg ctggcaagtg
     2581 tagcggtcac gctgcgcgta accaccacac ccgccgcgct taatgcgccg ctacagggcg
     2641 cgtactatgg ttgctttgac gtatgcggtg tgaaataccg cacagatgcg taaggagaaa
     2701 ataccgcatc aggcgccatt cgccattcag gctgcgcaac tgttgggaag ggcgatcggt
     2761 gcgggcctct tcgctattac gccagctggc gaaaggggga tgtgctgcaa ggcgattaag
     2821 ttgggtaacg ccagggtttt cccagtcacg acgttgtaaa acgacggcca gtgccaagct
     2881 tgcatgcgtg aagcagggtt tttgtaagta tctgcttcac gcagtgcctt aactggcaga
     2941 ttcttcatct tccacagcgg ccgttttggt ggccaatggg cccaaggcat cctgaatacc
     3001 caaattgcct ggcagcgcac cgtaggggaa cagaatattt acatgcccca ttttacggcc
     3061 cactctggct tctgccttgc catatagatg cggaataaag ccctgcgtgg ccataatctg
     3121 cggcagcagc gccatatctt ccggcccgac cagatttttc atgattgcat cagaatggcg
     3181 cacagcgtgc ggcaaaggca gccccgcaac tgcacggata tgcatgtcaa attggtcctg
     3241 cgggcaggca ttcatggtcc aatggccaga attatggggg cgcggggcca tttcattcac
     3301 cagcaggttg ccggtgcaat caacaaacat ttcaacgccc agaataccaa ccagctccag
     3361 cttttctgca atggtggtgg ctagttttat ggcctgcgtg gcaatatctg ggtcaatggg
     3421 ggcgggggct aatgttagat ccagaatacc gttccagtgc cggttcagcg ccgggtcaaa
     3481 gcaccttacc gtgccatctg caccacgcgc caccataaca ctaatctcgc aagcaaaatc
     3541 caccatacct tctgcaacca gaggatgtgg tgccagagcg ttgaaagcct cttccagatc
     3601 atggatgtga tgcacacggc gctggccttt gccatcatat ccattgcgag tggttttgag
     3661 aatcagcggc aaacccactt tttctgcggc ttcgtgtagc gttttgacat cggtaacagg
     3721 atgccatggc gcgagtggaa tacccgcaga agcaaaaaaa gttttttctg ccaatcggtc
     3781 ctgactgatg cgcagaatat gccccgaagg atgaacaggg cagtgtttgg ctaggcggtc
     3841 cagtgcatct gcgctgatgt tttcaaattc aaaggtaaca acatcaacag cgcgggcaaa
     3901 ggcatccagt gctgtcggat catcatactt gccgcatgtt acggcgtgag agacctgagc
     3961 cgccgggccg ttggcctctg gcgtaagaat atgcgtgcga aaaccaaggc gcgcggcagc
     4021 aacagcagac atgcggccaa gctggccacc ccccacaatg ccaataacgg cattgggctt
     4081 aagcggagaa tgtaaggagg tcatttatct tcggtaatgg gagagttggg gacagaggcc
     4141 gtctgcaatg cgcgccatgt ttcaaggcgt gcggcaaggg ccgggttata cagtgcaaga
     4201 atggaggcgg ccagcaaggc ggcatttttg gcgccggatg ccccaatagc caaagtgccc
     4261 acaggcacgc cgccgggcat ctgcacaatg gaaagcaggc tgtccatgcc tttaagagcg
     4321 cgagattcta ctggaacacc cagcacgggc aggcgtgtcc atgccgcaca catacccggc
     4381 agatgtgcag ctccaccggc cccagcaata atcacattca ggccgcgttc ggctgccgta
     4441 cgcgcataat ccgccaaccg gtctggcgta cgatctgcag aaacaatgag ggtttcatgc
     4501 ggaatttcca gctctgtcag caatgcgtct gcatggcgca tggtttccca gtctgactgg
     4561 ctgcccatga taatgcccac aacgggggca gaggctgctt tatcttctaa agcactggaa
     4621 gcagagggca ggggggcggt ttcgctcacg gtgggtatct atccggtttt ttaaagtctg
     4681 taacggagag gttcaggcaa tgtcatcagg gatcagaagg ctttcaacct tggtaatctg
     4741 atcttttagc agaagtttac gttttttcag ccgctggaga tagagttggt caataaaagt
     4801 agtttcatgc gccatgcggt tgataaccgt atccagatct ctgtgttcac tccggagttc
     4861 atgcagttgg gcaagcagta aatcgcgatc tcgcagcatg atgtcctgtc tccttcacca
     4921 ttggtgcgga atcgtgcgcc gggtgtggcg gcccgcaaag tgaatagcat gcctgcaggt
     4981 cgactctaga ggatccccgg gtaccgagct cgaattcgta atcatggtca tagctgtttc
     5041 ctgtgtgaaa ttgttatccg ctcacaattc cacacaacat acgagccgga agcataaagt
     5101 gtaaagcctg gggtgcctaa tgagtgagct aactcacatt aattgcgttg cgctcactgc
     5161 ccgctttcca gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg
     5221 ggagaggcgg tttgcgtatt gggcgct
//
