LOCUS       sequence-173211-        6922 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  Murine homologues of human Trim5.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 6922)
  AUTHORS   Lascano J, Uchil PD, Mothes W, Luban J
  TITLE     TRIM5 Retroviral Restriction Activity Correlates with the Ability To
            Induce Innate Immune Signaling.
  JOURNAL   J Virol. 2015 Oct 14;90(1):308-16. doi: 10.1128/JVI.02496-15.
  PUBMED    26468522
REFERENCE   2  (bases 1 to 6922)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; doi: "10.1128/JVI"; 
            journalName: "J Virol"; date: "2015-10-14- 14"; volume: "90"; issue:
            "1"; pages: "308-16"
COMMENT     Sequence Label: pcDNA 3.1(-) TRIM30A
FEATURES             Location/Qualifiers
     source          1..6922
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     complement(35..55)
                     /label=pBABE 3'
                     /note="SV40 enhancer, reverse primer for pBABE vectors"
     promoter        40..369
                     /label=SV40 promoter
                     /note="SV40 enhancer and early promoter"
     rep_origin      220..355
                     /label=SV40 ori
                     /note="SV40 origin of replication"
     primer_bind     282..301
                     /label=SV40pro-F
                     /note="SV40 promoter/origin, forward primer"
     CDS             436..1230
                     /codon_start=1
                     /gene="aph(3')-II (or nptII)"
                     /product="aminoglycoside phosphotransferase from Tn5"
                     /label=NeoR/KanR
                     /note="confers resistance to neomycin, kanamycin, and G418 
                     (Geneticin(R))"
                     /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
                     VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
                     SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
                     GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
                     LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
     primer_bind     complement(490..509)
                     /label=Neo-R
                     /note="Neomycin resistance gene, reverse primer"
     primer_bind     1100..1119
                     /label=Neo-F
                     /note="Neomycin resistance gene, forward primer"
     polyA_signal    1404..1525
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     primer_bind     complement(1441..1460)
                     /label=SV40pA-R
                     /note="SV40 polyA, reverse primer"
     primer_bind     1495..1514
                     /label=EBV-rev
                     /note="SV40 polyA terminator, reverse primer"
     primer_bind     complement(1574..1590)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     primer_bind     complement(1574..1590)
                     /label=M13 Reverse
                     /note="In lacZ gene. Also called M13-rev"
     primer_bind     complement(1587..1609)
                     /label=M13/pUC Reverse
                     /note="In lacZ gene"
     protein_bind    1598..1614
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(join(1622..1628,1629..1646,1647..1652))
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    1667..1688
                     /label=CAP binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding activates transcription in the presence 
                     of cAMP."
     primer_bind     complement(1805..1822)
                     /label=L4440
                     /note="L4440 vector, forward primer"
     rep_origin      complement(1976..2564)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     complement(2056..2075)
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     CDS             complement(join(2735..3526,3527..3595))
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     3358..3377
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     promoter        complement(3596..3700)
                     /gene="bla"
                     /label=AmpR promoter
     primer_bind     complement(3775..3794)
                     /label=pRS-marker
                     /note="pRS vectors, use to sequence yeast selectable 
                     marker"
     enhancer        3966..4345
                     /label=CMV enhancer
                     /note="human cytomegalovirus immediate early enhancer"
     promoter        4346..4549
                     /label=CMV promoter
                     /note="human cytomegalovirus (CMV) immediate early 
                     promoter"
     primer_bind     4500..4520
                     /label=CMV-F
                     /note="Human CMV immediate early promoter, forward primer"
     primer_bind     4594..4613
                     /label=T7
                     /note="T7 promoter, forward primer"
     promoter        4594..4612
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     regulatory      4652..4661
                     /label=Kozak sequence
                     /note="vertebrate consensus sequence for strong initiation 
                     of translation (Kozak, 1987)"
                     /regulatory_class="other"
     primer_bind     complement(6244..6261)
                     /label=BGH-rev
                     /note="Bovine growth hormone terminator, reverse primer. 
                     Also called BGH reverse"
     polyA_signal    6250..6474
                     /label=bGH poly(A) signal
                     /note="bovine growth hormone polyadenylation signal"
     rep_origin      join(6520..6922,1..26)
                     /direction=RIGHT
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow 
                     indicates direction of (+) strand synthesis"
     primer_bind     complement(6607..6626)
                     /label=F1ori-R
                     /note="F1 origin, reverse primer"
     primer_bind     6817..6838
                     /label=F1ori-F
                     /note="F1 origin, forward primer"
ORIGIN
        1 gatttaacaa aaatttaacg cgaattaatt ctgtggaatg tgtgtcagtt agggtgtgga
       61 aagtccccag gctccccagc aggcagaagt atgcaaagca tgcatctcaa ttagtcagca
      121 accaggtgtg gaaagtcccc aggctcccca gcaggcagaa gtatgcaaag catgcatctc
      181 aattagtcag caaccatagt cccgccccta actccgccca tcccgcccct aactccgccc
      241 agttccgccc attctccgcc ccatggctga ctaatttttt ttatttatgc agaggccgag
      301 gccgcctctg cctctgagct attccagaag tagtgaggag gcttttttgg aggcctaggc
      361 ttttgcaaaa agctcccggg agcttgtata tccattttcg gatctgatca agagacagga
      421 tgaggatcgt ttcgcatgat tgaacaagat ggattgcacg caggttctcc ggccgcttgg
      481 gtggagaggc tattcggcta tgactgggca caacagacaa tcggctgctc tgatgccgcc
      541 gtgttccggc tgtcagcgca ggggcgcccg gttctttttg tcaagaccga cctgtccggt
      601 gccctgaatg aactgcagga cgaggcagcg cggctatcgt ggctggccac gacgggcgtt
      661 ccttgcgcag ctgtgctcga cgttgtcact gaagcgggaa gggactggct gctattgggc
      721 gaagtgccgg ggcaggatct cctgtcatct caccttgctc ctgccgagaa agtatccatc
      781 atggctgatg caatgcggcg gctgcatacg cttgatccgg ctacctgccc attcgaccac
      841 caagcgaaac atcgcatcga gcgagcacgt actcggatgg aagccggtct tgtcgatcag
      901 gatgatctgg acgaagagca tcaggggctc gcgccagccg aactgttcgc caggctcaag
      961 gcgcgcatgc ccgacggcga ggatctcgtc gtgacccatg gcgatgcctg cttgccgaat
     1021 atcatggtgg aaaatggccg cttttctgga ttcatcgact gtggccggct gggtgtggcg
     1081 gaccgctatc aggacatagc gttggctacc cgtgatattg ctgaagagct tggcggcgaa
     1141 tgggctgacc gcttcctcgt gctttacggt atcgccgctc ccgattcgca gcgcatcgcc
     1201 ttctatcgcc ttcttgacga gttcttctga gcgggactct ggggttcgaa atgaccgacc
     1261 aagcgacgcc caacctgcca tcacgagatt tcgattccac cgccgccttc tatgaaaggt
     1321 tgggcttcgg aatcgttttc cgggacgccg gctggatgat cctccagcgc ggggatctca
     1381 tgctggagtt cttcgcccac cccaacttgt ttattgcagc ttataatggt tacaaataaa
     1441 gcaatagcat cacaaatttc acaaataaag catttttttc actgcattct agttgtggtt
     1501 tgtccaaact catcaatgta tcttatcatg tctgtatacc gtcgacctct agctagagct
     1561 tggcgtaatc atggtcatag ctgtttcctg tgtgaaattg ttatccgctc acaattccac
     1621 acaacatacg agccggaagc ataaagtgta aagcctgggg tgcctaatga gtgagctaac
     1681 tcacattaat tgcgttgcgc tcactgcccg ctttccagtc gggaaacctg tcgtgccagc
     1741 tgcattaatg aatcggccaa cgcgcgggga gaggcggttt gcgtattggg cgctcttccg
     1801 cttcctcgct cactgactcg ctgcgctcgg tcgttcggct gcggcgagcg gtatcagctc
     1861 actcaaaggc ggtaatacgg ttatccacag aatcagggga taacgcagga aagaacatgt
     1921 gagcaaaagg ccagcaaaag gccaggaacc gtaaaaaggc cgcgttgctg gcgtttttcc
     1981 ataggctccg cccccctgac gagcatcaca aaaatcgacg ctcaagtcag aggtggcgaa
     2041 acccgacagg actataaaga taccaggcgt ttccccctgg aagctccctc gtgcgctctc
     2101 ctgttccgac cctgccgctt accggatacc tgtccgcctt tctcccttcg ggaagcgtgg
     2161 cgctttctca tagctcacgc tgtaggtatc tcagttcggt gtaggtcgtt cgctccaagc
     2221 tgggctgtgt gcacgaaccc cccgttcagc ccgaccgctg cgccttatcc ggtaactatc
     2281 gtcttgagtc caacccggta agacacgact tatcgccact ggcagcagcc actggtaaca
     2341 ggattagcag agcgaggtat gtaggcggtg ctacagagtt cttgaagtgg tggcctaact
     2401 acggctacac tagaagaaca gtatttggta tctgcgctct gctgaagcca gttaccttcg
     2461 gaaaaagagt tggtagctct tgatccggca aacaaaccac cgctggtagc ggtggttttt
     2521 ttgtttgcaa gcagcagatt acgcgcagaa aaaaaggatc tcaagaagat cctttgatct
     2581 tttctacggg gtctgacgct cagtggaacg aaaactcacg ttaagggatt ttggtcatga
     2641 gattatcaaa aaggatcttc acctagatcc ttttaaatta aaaatgaagt tttaaatcaa
     2701 tctaaagtat atatgagtaa acttggtctg acagttacca atgcttaatc agtgaggcac
     2761 ctatctcagc gatctgtcta tttcgttcat ccatagttgc ctgactcccc gtcgtgtaga
     2821 taactacgat acgggagggc ttaccatctg gccccagtgc tgcaatgata ccgcgagacc
     2881 cacgctcacc ggctccagat ttatcagcaa taaaccagcc agccggaagg gccgagcgca
     2941 gaagtggtcc tgcaacttta tccgcctcca tccagtctat taattgttgc cgggaagcta
     3001 gagtaagtag ttcgccagtt aatagtttgc gcaacgttgt tgccattgct acaggcatcg
     3061 tggtgtcacg ctcgtcgttt ggtatggctt cattcagctc cggttcccaa cgatcaaggc
     3121 gagttacatg atcccccatg ttgtgcaaaa aagcggttag ctccttcggt cctccgatcg
     3181 ttgtcagaag taagttggcc gcagtgttat cactcatggt tatggcagca ctgcataatt
     3241 ctcttactgt catgccatcc gtaagatgct tttctgtgac tggtgagtac tcaaccaagt
     3301 cattctgaga atagtgtatg cggcgaccga gttgctcttg cccggcgtca atacgggata
     3361 ataccgcgcc acatagcaga actttaaaag tgctcatcat tggaaaacgt tcttcggggc
     3421 gaaaactctc aaggatctta ccgctgttga gatccagttc gatgtaaccc actcgtgcac
     3481 ccaactgatc ttcagcatct tttactttca ccagcgtttc tgggtgagca aaaacaggaa
     3541 ggcaaaatgc cgcaaaaaag ggaataaggg cgacacggaa atgttgaata ctcatactct
     3601 tcctttttca atattattga agcatttatc agggttattg tctcatgagc ggatacatat
     3661 ttgaatgtat ttagaaaaat aaacaaatag gggttccgcg cacatttccc cgaaaagtgc
     3721 cacctgacgt cgacggatcg ggagatctcc cgatccccta tggtgcactc tcagtacaat
     3781 ctgctctgat gccgcatagt taagccagta tctgctccct gcttgtgtgt tggaggtcgc
     3841 tgagtagtgc gcgagcaaaa tttaagctac aacaaggcaa ggcttgaccg acaattgcat
     3901 gaagaatctg cttagggtta ggcgttttgc gctgcttcgc gatgtacggg ccagatatac
     3961 gcgttgacat tgattattga ctagttatta atagtaatca attacggggt cattagttca
     4021 tagcccatat atggagttcc gcgttacata acttacggta aatggcccgc ctggctgacc
     4081 gcccaacgac ccccgcccat tgacgtcaat aatgacgtat gttcccatag taacgccaat
     4141 agggactttc cattgacgtc aatgggtgga gtatttacgg taaactgccc acttggcagt
     4201 acatcaagtg tatcatatgc caagtacgcc ccctattgac gtcaatgacg gtaaatggcc
     4261 cgcctggcat tatgcccagt acatgacctt atgggacttt cctacttggc agtacatcta
     4321 cgtattagtc atcgctatta ccatggtgat gcggttttgg cagtacatca atgggcgtgg
     4381 atagcggttt gactcacggg gatttccaag tctccacccc attgacgtca atgggagttt
     4441 gttttggcac caaaatcaac gggactttcc aaaatgtcgt aacaactccg ccccattgac
     4501 gcaaatgggc ggtaggcgtg tacggtggga ggtctatata agcagagctc tctggctaac
     4561 tagagaaccc actgcttact ggcttatcga aattaatacg actcactata gggagaccca
     4621 agctggctag cgtttaaacg ggccctctag cgccaccatg gcctcatcag tcctggagat
     4681 gataaaggag gaagtaacct gtcctatctg tttggagctc ctgaaggaac ctgtgagtgc
     4741 tgattgtaac cacagcttct gcagagcctg catcacactg aattatgagt ccaacagaaa
     4801 cacagacggg aagggcaact gccctgtatg ccgagttcct tacccatttg ggaatctgag
     4861 gcctaatcta catgtggcca acatagtaga gaggctcaag ggattcaagt ccattccaga
     4921 ggaggagcag aaggtgaata tctgtgcaca acatggagag aaactccggc tcttctgtag
     4981 gaaggacatg atggtcatct gctggctttg tgagcgatct caggagcacc gtggtcacca
     5041 aacagctctc attgaagagg ttgaccaaga atacaaggag aagctgcagg gagctctgtg
     5101 gaagctgatg aaaaaggcaa aaatatgtga tgaatggcag gatgaccttc aactgcagag
     5161 agttgactgg gagaaccaaa tacagatcaa tgtagaaaat gttcagagac agtttaaagg
     5221 actaagagac ctcctggact ccaaggagaa tgaggagctg cagaagctga agaaagagaa
     5281 gaaagaggtt atggaaaagc tggaagagtc tgaaaatgag ctggaggatc agacagagtt
     5341 ggtgagagac ctcatctcag atgtggaaca tcatttggag ctctcaacct tagaaatgct
     5401 gcagggtgca aattgtgtcc tgagaaggag tcagtcctta agcctgcaac agccccaaac
     5461 tgtcccccaa aagagaaaaa gaacattcca agctccagat ctgaaaggca tgctgcaagt
     5521 gtatcaagga ctcatggata tccagcaata ctgggttcat atgactctac atgcaaggaa
     5581 caatgcagtc attgccatta acaaagaaaa aagacaaata cagtatagaa gttacaatac
     5641 ggttccagtt tctgagatct accatttggg tgtcctggga tatccagctc tttcctcagg
     5701 gaagcattac tgggaagtag acatatctag aagtgatgcc tggctcctcg gattaaatga
     5761 cggaaagtgt gctcaacccc aacttcactc aaaggaagaa atgggcatca aaaaaaacct
     5821 tcattctcag atcaaacaaa atgtattgtt tcagcctaaa tgtggctact gggttatagg
     5881 gatgaagaat ccgtctgtat acaaggcctt tgatgagtgt tctatcaccc acaattccag
     5941 tatcctggtc atctctctgc ctgatcgtcc cagtcgtgtc ggagttttcc tggatcggaa
     6001 agctggcact ctctcatttt atgatgtttc taactgcggt gctctcatct ataggttcta
     6061 tgaccctgcc ttccctgttg aagtctatcc atattttaat cctatgaaat gttcagagcc
     6121 aatgactata tgcgggccac cctcctaagc ggccgccact gtgctggata tctgcagaat
     6181 tccaccacac tggactagtg gatccgagct cggtaccaag cttaagttta aaccgctgat
     6241 cagcctcgac tgtgccttct agttgccagc catctgttgt ttgcccctcc cccgtgcctt
     6301 ccttgaccct ggaaggtgcc actcccactg tcctttccta ataaaatgag gaaattgcat
     6361 cgcattgtct gagtaggtgt cattctattc tggggggtgg ggtggggcag gacagcaagg
     6421 gggaggattg ggaagacaat agcaggcatg ctggggatgc ggtgggctct atggcttctg
     6481 aggcggaaag aaccagctgg ggctctaggg ggtatcccca cgcgccctgt agcggcgcat
     6541 taagcgcggc gggtgtggtg gttacgcgca gcgtgaccgc tacacttgcc agcgccctag
     6601 cgcccgctcc tttcgctttc ttcccttcct ttctcgccac gttcgccggc tttccccgtc
     6661 aagctctaaa tcgggggctc cctttagggt tccgatttag tgctttacgg cacctcgacc
     6721 ccaaaaaact tgattagggt gatggttcac gtagtgggcc atcgccctga tagacggttt
     6781 ttcgcccttt gacgttggag tccacgttct ttaatagtgg actcttgttc caaactggaa
     6841 caacactcaa ccctatctcg gtctattctt ttgatttata agggattttg ccgatttcgg
     6901 cctattggtt aaaaaatgag ct
//
