LOCUS       sequence-210668-        4239 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  Reporter gene expression in S. rosetta.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4239)
  AUTHORS   Booth DS, Szmidt-Middleton H, King N
  TITLE     Transfection of choanoflagellates illuminates their cell biology and
            the ancestry of animal septins.
  JOURNAL   Mol Biol Cell. 2018 Dec 1;29(25):3026-3038. doi: 
            10.1091/mbc.E18-08-0514. Epub 2018 Oct 3.
  PUBMED    30281390
REFERENCE   2  (bases 1 to 4239)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; doi: 
            "10.1091/mbc.E18-08-0514"; journalName: "Mol Biol Cell"; date: 
            "2018-12-1- 1"; volume: "29"; issue: "25"; pages: "3026-3038"
COMMENT     Sequence Label: NK611
FEATURES             Location/Qualifiers
     source          1..4239
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     complement(11..29)
                     /label=pBRforEco
                     /note="pBR322 vectors, upsteam of EcoRI site, forward 
                     primer"
     promoter        97..201
                     /gene="bla"
                     /label=AmpR promoter
     CDS             join(202..270,271..1062)
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     complement(420..439)
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     rep_origin      1233..1821
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     1722..1741
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     primer_bind     1975..1992
                     /label=L4440
                     /note="L4440 vector, forward primer"
     protein_bind    2109..2130
                     /label=CAP binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding activates transcription in the presence 
                     of cAMP."
     promoter        join(2145..2150,2151..2168,2169..2175)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    2183..2199
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     2188..2210
                     /label=M13/pUC Reverse
                     /note="In lacZ gene"
     primer_bind     2207..2223
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     primer_bind     2207..2223
                     /label=M13 Reverse
                     /note="In lacZ gene. Also called M13-rev"
     primer_bind     complement(3846..3863)
                     /label=M13 Forward
                     /note="In lacZ gene. Also called M13-F20 or M13 (-21) 
                     Forward"
     primer_bind     complement(3846..3862)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     primer_bind     complement(3855..3877)
                     /label=M13/pUC Forward
                     /note="In lacZ gene"
     primer_bind     complement(4071..4090)
                     /label=pRS-marker
                     /note="pRS vectors, use to sequence yeast selectable 
                     marker"
     primer_bind     4190..4212
                     /label=pGEX 3'
                     /note="pGEX vectors, reverse primer"
ORIGIN
        1 agacgaaagg gcctcgtgat acgcctattt ttataggtta atgtcatgat aataatggtt
       61 tcttagacgt caggtggcac ttttcgggga aatgtgcgcg gaacccctat ttgtttattt
      121 ttctaaatac attcaaatat gtatccgctc atgagacaat aaccctgata aatgcttcaa
      181 taatattgaa aaaggaagag tatgagtatt caacatttcc gtgtcgccct tattcccttt
      241 tttgcggcat tttgccttcc tgtttttgct cacccagaaa cgctggtgaa agtaaaagat
      301 gctgaagatc agttgggtgc acgagtgggt tacatcgaac tggatctcaa cagcggtaag
      361 atccttgaga gttttcgccc cgaagaacgt tttccaatga tgagcacttt taaagttctg
      421 ctatgtggcg cggtattatc ccgtattgac gccgggcaag agcaactcgg tcgccgcata
      481 cactattctc agaatgactt ggttgagtac tcaccagtca cagaaaagca tcttacggat
      541 ggcatgacag taagagaatt atgcagtgct gccataacca tgagtgataa cactgcggcc
      601 aacttacttc tgacaacgat cggaggaccg aaggagctaa ccgctttttt gcacaacatg
      661 ggggatcatg taactcgcct tgatcgttgg gaaccggagc tgaatgaagc cataccaaac
      721 gacgagcgtg acaccacgat gcctgtagca atggcaacaa cgttgcgcaa actattaact
      781 ggcgaactac ttactctagc ttcccggcaa caattaatag actggatgga ggcggataaa
      841 gttgcaggac cacttctgcg ctcggccctt ccggctggct ggtttattgc tgataaatct
      901 ggagccggtg agcgtgggtc tcgcggtatc attgcagcac tggggccaga tggtaagccc
      961 tcccgtatcg tagttatcta cacgacgggg agtcaggcaa ctatggatga acgaaataga
     1021 cagatcgctg agataggtgc ctcactgatt aagcattggt aactgtcaga ccaagtttac
     1081 tcatatatac tttagattga tttaaaactt catttttaat ttaaaaggat ctaggtgaag
     1141 atcctttttg ataatctcat gaccaaaatc ccttaacgtg agttttcgtt ccactgagcg
     1201 tcagaccccg tagaaaagat caaaggatct tcttgagatc ctttttttct gcgcgtaatc
     1261 tgctgcttgc aaacaaaaaa accaccgcta ccagcggtgg tttgtttgcc ggatcaagag
     1321 ctaccaactc tttttccgaa ggtaactggc ttcagcagag cgcagatacc aaatactgtt
     1381 cttctagtgt agccgtagtt aggccaccac ttcaagaact ctgtagcacc gcctacatac
     1441 ctcgctctgc taatcctgtt accagtggct gctgccagtg gcgataagtc gtgtcttacc
     1501 gggttggact caagacgata gttaccggat aaggcgcagc ggtcgggctg aacggggggt
     1561 tcgtgcacac agcccagctt ggagcgaacg acctacaccg aactgagata cctacagcgt
     1621 gagctatgag aaagcgccac gcttcccgaa gggagaaagg cggacaggta tccggtaagc
     1681 ggcagggtcg gaacaggaga gcgcacgagg gagcttccag ggggaaacgc ctggtatctt
     1741 tatagtcctg tcgggtttcg ccacctctga cttgagcgtc gatttttgtg atgctcgtca
     1801 ggggggcgga gcctatggaa aaacgccagc aacgcggcct ttttacggtt cctggccttt
     1861 tgctggcctt ttgctcacat gttctttcct gcgttatccc ctgattctgt ggataaccgt
     1921 attaccgcct ttgagtgagc tgataccgct cgccgcagcc gaacgaccga gcgcagcgag
     1981 tcagtgagcg aggaagcgga agagcgccca atacgcaaac cgcctctccc cgcgcgttgg
     2041 ccgattcatt aatgcagctg gcacgacagg tttcccgact ggaaagcggg cagtgagcgc
     2101 aacgcaatta atgtgagtta gctcactcat taggcacccc aggctttaca ctttatgctt
     2161 ccggctcgta tgttgtgtgg aattgtgagc ggataacaat ttcacacagg aaacagctat
     2221 gaccatgatt acgccaagct tgtaacaaac tgccctgcac ctcgtctgcc acctcggttg
     2281 ccaccttgtc ctcgttcccc accaccttgt cctcgtccgc tgccagcatc gcgatcagcg
     2341 tgcttgcgct tggcgctgct gctgccggac ttcccgttat cggccatact ttttgtggtg
     2401 tttccaggcg agatgcgctg ttggcaaagc aaaatggcaa aacggccttt gccacacgcc
     2461 atcctcgcct cacctcgacg tgcggctttc ctaaacagga aacctgacga aacgaattga
     2521 gcgcattggc acacgtgtgc tgtgcgcttt gtgtcgctgc atgctatcca ccacgcacca
     2581 cccaatcagt ccaactgtga cgtgtcacgc ctaggcgaaa aagcggcgag agcgccaaag
     2641 caaacgccaa acaaaaacca aagaagagca aacgcagcga actgatgtga gacaaggggg
     2701 cggtgcaatg cgtcactgaa cgtgcaaaag ccaaaaacaa ccaagaagca gctgcacaac
     2761 acaacaacaa caacaacaac aacaacacct tgttgtcgca gctctacgtt tggcattttc
     2821 ctgttgttct ctcttgcgat cagtccgtgt ctcttttctc ccccttttcc cagaccacaa
     2881 ccacaaaaca accagccatg gtctccaagg gcgaggagga caacatggct atcatcaagg
     2941 agttcatgcg cttcaaggtc cacatggagg gctccgtcaa cggccacgag ttcgagatcg
     3001 agggcgaggg cgagggccgc ccctacgagg gcacccagac cgccaagctc aaggtgacga
     3061 agggcggccc cctccccttc gcctgggaca tcctctcccc ccagttcatg tacggctcca
     3121 aggcttacgt caagcacccc gccgacatcc ccgactacct caagctctcc ttccccgagg
     3181 gcttcaagtg ggagcgcgtc atgaacttcg aggacggcgg cgtcgtcacc gtcacccagg
     3241 actcctctct tcaggacggc gagttcatct acaaggtcaa gctgcgcggc accaacttcc
     3301 cctccgacgg ccccgtcatg cagaagaaga cgatgggttg ggaggcttcc tccgagcgca
     3361 tgtaccccga ggacggcgcc ctcaagggcg agatcaagca gcgcctcaag ctcaaggacg
     3421 gcggccacta cgacgccgag gtcaagacca cctacaaggc caagaagccc gtccagctcc
     3481 ccggcgccta caacgtcaac atcaagctcg acatcacctc ccacaacgag gactacacca
     3541 tcgtcgagca gtacgagcgt gccgagggcc gccacagcac gggcggtatg gacgagcttt
     3601 acaagtctta agcgcctcgt tggtcattgc caccttgttg cctcttttgc tgttgtcctc
     3661 gtgtcgacgc gtgccacgtg cgcttgttgt gagttgattc tgcttcttgt gcacgtcatg
     3721 ccgagccctt gggccccgca ataaacccac tatgccagtg taactatcct tccccccaat
     3781 gtataactgt gacgatcaat gagcggtgcc cgtctagagg atccccgggt accgagctcg
     3841 aattcactgg ccgtcgtttt acaacgtcgt gactgggaaa accctggcgt tacccaactt
     3901 aatcgccttg cagcacatcc ccctttcgcc agctggcgta atagcgaaga ggcccgcacc
     3961 gatcgccctt cccaacagtt gcgcagcctg aatggcgaat ggcgcctgat gcggtatttt
     4021 ctccttacgc atctgtgcgg tatttcacac cgcatatggt gcactctcag tacaatctgc
     4081 tctgatgccg catagttaag ccagccccga cacccgccaa cacccgctga cgcgccctga
     4141 cgggcttgtc tgctcccggc atccgcttac agacaagctg tgaccgtctc cgggagctgc
     4201 atgtgtcaga ggttttcacc gtcatcaccg aaacgcgcg
//
