LOCUS       sequence-219717-        3171 bp    DNA     linear   UNA 15-DEC-2025
DEFINITION  Lentiviral expression of TRIM33__RET fusion.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      natural DNA sequence
  ORGANISM  unspecified
REFERENCE   1  (bases 1 to 3171)
  AUTHORS   Ng PK, Li J, Jeong KJ, Shao S, Chen H, Tsang YH, Sengupta S, Wang Z,
            Bhavana VH, Tran R, Soewito S, Minussi DC, Moreno D, Kong K, 
            Dogruluk T, Lu H, Gao J, Tokheim C, Zhou DC, Johnson AM, Zeng J, Ip 
            CKM, Ju Z, Wester M, Yu S, Li Y, Vellano CP, Schultz N, Karchin R, 
            Ding L, Lu Y, Cheung LWT, Chen K, Shaw KR, Meric-Bernstam F, Scott 
            KL, Yi S, Sahni N, Liang H, Mills GB
  TITLE     Systematic Functional Annotation of Somatic Mutations in Cancer.
  JOURNAL   Cancer Cell. 2018 Mar 12;33(3):450-462.e10. doi: 
            10.1016/j.ccell.2018.01.021.
  PUBMED    29533785
REFERENCE   2  (bases 1 to 3171)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; doi: 
            "10.1016/j.ccell.2018.01"; journalName: "Cancer Cell"; date: 
            "2018-03-12- 12"; volume: "33"; issue: "3"; pages: "450-462.e10"
COMMENT     Sequence Label: pHAGE-TRIM33__RET
FEATURES             Location/Qualifiers
     source          1..3171
                     /mol_type="genomic DNA"
                     /organism="unspecified"
     CDS             complement(1817..1828)
                     /codon_start=1
                     /product="Factor Xa recognition and cleavage site"
                     /label=Factor Xa site
                     /translation="IEGR"
     protein_bind    complement(2062..2086)
                     /gene="mutant version of attB"
                     /label=attB2
                     /bound_moiety="BP Clonase(TM)"
                     /note="recombination site for the Gateway(R) BP reaction"
ORIGIN
        1 atggcggaaa acaaaggcgg cggcgaggct gagagcggcg gcgggggcag cggcagcgcg
       61 ccggtaactg ccggggccgc cgggcccgcc gcgcaggagg cggagccgcc tctcaccgcg
      121 gtgctggtgg aggaggagga ggaggaaggc ggcagggccg gcgctgaggg cggcgcggcc
      181 gggcccgacg acgggggggt ggccgcggcc tcctcgggct cggcccaggc tgcttcatct
      241 cctgcggcct cagtgggcac tggagttgcc gggggcgcag tatcgacgcc ggctccagct
      301 ccagcctcgg ctcccgctcc gggtccctcg gcagggccgc ctcctggacc gccagcctcg
      361 ctcctggaca cctgcgccgt gtgtcagcag agcttgcaga gccggcgtga ggcggagccc
      421 aagctgctgc cctgtcttca ctccttctgc ctgcgctgcc tgcccgagcc ggagcgccag
      481 ctcagcgtgc ccatcccggg gggcagcaac ggcgacatcc agcaagttgg tgtaatacgg
      541 tgcccagtat gccgccaaga atgcagacag atagaccttg tggataatta ttttgtgaaa
      601 gacacatctg aagctcctag cagttctgat gaaaaatcag aacaggtatg tactagttgt
      661 gaagacaatg caagtgcagt tggcttttgt gtagaatgtg gagagtggct atgtaagaca
      721 tgtatcgaag cacatcaaag agtaaaattt actaaagatc acttgatcag gaagaaagaa
      781 gatgtctcag agtctgttgg agcatctggt caacgccctg ttttctgccc tgtacacaaa
      841 caagaacagt tgaaactttt ctgtgaaaca tgtgatagat tgacatgtag agactgtcag
      901 ctattggaac acaaagaaca taggtatcag tttttggaag aagcttttca aaatcagaag
      961 ggtgcaattg agaatctact ggcgaaactt cttgagaaga agaattatgt tcattttgca
     1021 gctactcagg tgcagaatag gataaaagaa gtaaatgaga ctaacaaacg agtagaacag
     1081 gaaattaaag tggccatttt cacccttatc aatgaaatta ataagaaagg aaaatctctc
     1141 ttacaacagc tagagaatgt tacaaaggaa agacagatga agttactaca gcagcagaat
     1201 gacatcacag gcctttcccg gcaggtgaag catgttatga acttcacaaa ttgggcaatt
     1261 gcaagtggca gcagcacagc actactatac agcaagcgac tgattacttt ccagttgcgt
     1321 catattttga aagcacggtg tgatcctgtc cctgctgcta atggagcaat acgtttccat
     1381 tgtgatccca ccttctgggc aaagaatgta gtcaatttag gtaatctagt aatagagagt
     1441 aaaccagctc ctggttatac tcctaatgtt gtagttgggc aagttcctcc agggacaaac
     1501 cacattagta aaacccctgg acagattaac ttagcacagc ttcgactcca gcacatgcaa
     1561 caacaagtat atgcacagaa acatcagcag ttgcaacaga tgaggatgca gcaaccacca
     1621 gcacctgtac caactacaac aacaacaaca caacagcatc ctagacaagc agcccctcag
     1681 atgttacaac aacagcctcc tcgattgatc agtgtgcaaa caatgcaaag aggcaacatg
     1741 aactgtggag cttttcaagc ccatcagatg agactggctc agaatgctgc cagaatacca
     1801 gggataccca ggcacagcgg ccctcaatat tccatgatgc agccacacct ccaaagacaa
     1861 cactcaaacc cagggcatgc tggacccttt cccgtagtat cggtacacaa caccacaatc
     1921 aacccaacga gccctactac agcaactatg gcaaatgcaa accgaggtcc caccagccca
     1981 tctgttacag caatagagct aatcccctca gttaccaatc cagaaaacct tccatcgctg
     2041 ccagatattc cacccataca gtcccagctt tcttgtacaa agtggttcga ggatccaaag
     2101 tgggaattcc ctcggaagaa cttggttctt ggaaaaactc taggagaagg cgaatttgga
     2161 aaagtggtca aggcaacggc cttccatctg aaaggcagag cagggtacac cacggtggcc
     2221 gtgaagatgc tgaaagagaa cgcctccccg agtgagcttc gagacctgct gtcagagttc
     2281 aacgtcctga agcaggtcaa ccacccacat gtcatcaaat tgtatggggc ctgcagccag
     2341 gatggcccgc tcctcctcat cgtggagtac gccaaatacg gctccctgcg gggcttcctc
     2401 cgcgagagcc gcaaagtggg gcctggctac ctgggcagtg gaggcagccg caactccagc
     2461 tccctggacc acccggatga gcgggccctc accatgggcg acctcatctc atttgcctgg
     2521 cagatctcac aggggatgca gtatctggcc gagatgaagc tcgttcatcg ggacttggca
     2581 gccagaaaca tcctggtagc tgaggggcgg aagatgaaga tttcggattt cggcttgtcc
     2641 cgagatgttt atgaagagga ttcgtacgtg aagaggagcc agggtcggat tccagttaaa
     2701 tggatggcaa ttgaatccct ttttgatcat atctacacca cgcaaagtga tgtatggtct
     2761 tttggtgtcc tgctgtggga gatcgtgacc ctagggggaa acccctatcc tgggattcct
     2821 cctgagcggc tcttcaacct tctgaagacc ggccaccgga tggagaggcc agacaactgc
     2881 agcgaggaga tgtactgcct gatgctgcaa tgctggaagc aggagccgga caaaaggccg
     2941 gtgtttgcgg acatcagcaa agacctggag aagatgatgg ttaagaggag agactacttg
     3001 gaccttgcgg cgtccactcc atctgactcc ctgatttatg acgacggcct ctcagaggag
     3061 gagacaccgc tggtggactg taataatgcc cccctccctc gagccctccc ttccacatgg
     3121 attgaaaaca aactctatgg tagaatttcc catgcattta ctagattcta g
//
