LOCUS       sequence-234762-        6906 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  Expression of recombinant S. mansoni protein.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 6906)
  AUTHORS   Cecile Crosnier, Anna V. Protasio, Gabriel Rinaldi, Shona Wilson, 
            Matthew Berriman, Gavin J. Wright
  TITLE     A library of cell-surface and secreted proteins from Schistosoma 
            mansoni identifies early serological markers of infection
  JOURNAL   bioRXiv
REFERENCE   2  (bases 1 to 6906)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "bioRXiv"
COMMENT     Sequence Label: Smp_194860-Cd4-bio-His
FEATURES             Location/Qualifiers
     source          1..6906
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     enhancer        1..380
                     /label=CMV enhancer
                     /note="human cytomegalovirus immediate early enhancer"
     promoter        381..584
                     /label=CMV promoter
                     /note="human cytomegalovirus (CMV) immediate early 
                     promoter"
     primer_bind     535..555
                     /label=CMV-F
                     /note="Human CMV immediate early promoter, forward primer"
     primer_bind     581..605
                     /label=LNCX
                     /note="Human CMV promoter, forward primer"
     primer_bind     1086..1105
                     /label=pMT2-F
                     /note="Synthetic intron, forward primer"
     regulatory      1128..1137
                     /label=Kozak sequence
                     /note="vertebrate consensus sequence for strong initiation 
                     of translation (Kozak, 1987)"
                     /regulatory_class="other"
     CDS             2064..2081
                     /codon_start=1
                     /product="6xHis affinity tag"
                     /label=6xHis
                     /translation="HHHHHH"
     polyA_signal    2133..2188
                     /label=beta-globin poly(A) signal
                     /note="rabbit beta-globin polyadenylation signal (Gil and 
                     Proudfoot, 1987)"
     primer_bind     complement(2187..2206)
                     /label=rbglobpA-R
                     /note="Rabbit beta-globin polyA, reverse primer. Also 
                     called rb-glob-pA-term-R"
     primer_bind     complement(4424..4442)
                     /label=pBRforEco
                     /note="pBR322 vectors, upsteam of EcoRI site, forward 
                     primer"
     promoter        4510..4614
                     /gene="bla"
                     /label=AmpR promoter
     CDS             join(4615..4683,4684..5475)
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     complement(4833..4852)
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     rep_origin      5646..6234
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     6135..6154
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     primer_bind     6388..6405
                     /label=L4440
                     /note="L4440 vector, forward primer"
     protein_bind    6522..6543
                     /label=CAP binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding activates transcription in the presence 
                     of cAMP."
     promoter        join(6558..6563,6564..6581,6582..6588)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    6596..6612
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     6601..6623
                     /label=M13/pUC Reverse
                     /note="In lacZ gene"
     primer_bind     6620..6636
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     primer_bind     6620..6636
                     /label=M13 Reverse
                     /note="In lacZ gene. Also called M13-rev"
ORIGIN
        1 gacattgatt attgactagt tattaatagt aatcaattac ggggtcatta gttcatagcc
       61 catatatgga gttccgcgtt acataactta cggtaaatgg cccgcctggc tgaccgccca
      121 acgacccccg cccattgacg tcaataatga cgtatgttcc catagtaacg ccaataggga
      181 ctttccattg acgtcaatgg gtggagtatt tacggtaaac tgcccacttg gcagtacatc
      241 aagtgtatca tatgccaagt ccgcccccta ttgacgtcaa tgacggtaaa tggcccgcct
      301 ggcattatgc ccagtacatg accttacggg actttcctac ttggcagtac atctacgtat
      361 tagtcatcgc tattaccatg gtgatgcggt tttggcagta caccaatggg cgtggatagc
      421 ggtttgactc acggggattt ccaagtctcc accccattga cgtcaatggg agtttgtttt
      481 ggcaccaaaa tcaacgggac tttccaaaat gtcgtaataa ccccgccccg ttgacgcaaa
      541 tgggcggtag gcgtgtacgg tgggaggtct atataagcag agctcgttta gtgaaccgtc
      601 agatcctcac tctcttccgc atcgctgtct gcgagggcca gctgttgggc tcgcggttga
      661 ggacaaactc ttcgcggtct ttccagtact cttggatcgg aaacccgtcg gcctccgaac
      721 ggtactccgc caccgaggga cctgagcgag tccgcatcga ccggatcgga aaacctctcg
      781 agaaaggcgt ctaaccagtc acagtcgcaa ggtaggctga gcaccgtggc gggcggcagc
      841 gggtggcggt cggggttgtt tctggcggag gtgctgctga tgatgtaatt aaagtaggcg
      901 gtcttgagac ggcggatggt cgaggtgagg tgtggcaggc ttgagatcca gctgttgggg
      961 tgagtactcc ctctcaaaag cgggcattac ttctgcgcta agattgtcag tttccaaaaa
     1021 cgaggaggat ttgatattca cctggcccga tctggccata cacttgagtg acaatgacat
     1081 ccactttgcc tttctctcca caggtgtcca ctcccaggtc caagtttgcc accatggagt
     1141 ttcagaccca ggtactcatg tccctgctgc tctgcatgtc tggtgcggcc gccgaaagcc
     1201 aggccagcca gaaagagctg ttcaccgaga gcgtgaagct gtggaagtcc atcaccgagc
     1261 tgtggaaaag attcgagcac aactgcagag tgaagatccg gaagtacctg gaagaggaca
     1321 acctgggcga gaagctggcc gccgtggtgt ccatctacgt gaagcggctg aacaagcggc
     1381 tggacatgag actgagcgag gaccgggccg aaggcgcgcc gtcgacctcc atcacggcct
     1441 ataagagtga gggggagtca gcggagttct ccttcccact caaccttgga gaggaaagcc
     1501 tgcagggaga gttgagatgg aaggcagaga aggctccttc ttcccagtcc tggatcacct
     1561 tctccctaaa gaaccaaaag gtgtctgtgc agaagtctac tagcaacccc aagttccagc
     1621 tgtccgaaac gctcccactc acccttcaga taccccaggt ctcccttcag tttgctggtt
     1681 ctggcaacct gaccctgact ctggacagag ggatactgta tcaggaagtg aacctggtgg
     1741 tgatgaaagt gactcagccc gacagcaaca ctttgacctg tgaggtgatg ggacccacct
     1801 cacccaagat gagactgatc ttgaagcagg agaatcagga ggccagggtc tccaggcagg
     1861 agaaagtgat tcaagtgcag gcccctgaag caggggtgtg gcaatgtcta ctgagtgaag
     1921 gtgaagaggt caagatggac tccaagatcc aggttttatc caaagggttg aattccggca
     1981 gcctgcacca catcctggac gcccagaaga tgctgtggaa ccacagggac aggaacctgc
     2041 ctcctctggc ccctctgggc ccccaccacc atcaccacca ttgagtctag acacgtgatt
     2101 aattaaggat cccccgacct cgacctctgg ctaataaagg aaatttattt tcattgcaat
     2161 agtgtgttgg aattttttgt gtctctcact cggaaggaca tatgggaggg caaatcattt
     2221 ggtcgagatc cctcggagat ctctagctag aggatcgatc cccgccccgg acgaactaaa
     2281 cctgactacg acatctctgc cccttcttcg cggggcagtg catgtaatcc cttcagttgg
     2341 ttggtacaac ttgccaactg ggccctgttc cacatgtgac acgggggggg accaaacaca
     2401 aaggggttct ctgactgtag ttgacatcct tataaatgga tgtgcacatt tgccaacact
     2461 gagtggcttt catcctggag cagactttgc agtctgtgga ctgcaacaca acattgcctt
     2521 tatgtgtaac tcttggctga agctcttaca ccaatgctgg gggacatgta cctcccaggg
     2581 gcccaggaag actacgggag gctacaccaa cgtcaatcag aggggcctgt gtagctaccg
     2641 ataagcggac cctcaagagg gcattagcaa tagtgtttat aaggccccct tgttaaccct
     2701 aaacgggtag catatgcttc ccgggtagta gtatatacta tccagactaa ccctaattca
     2761 atagcatatg ttacccaacg ggaagcatat gctatcgaat tagggttagt aaaagggtcc
     2821 taaggaacag cgatatctcc caccccatga gctgtcacgg ttttatttac atggggtcag
     2881 gattccacga gggtagtgaa ccattttagt cacaagggca gtggctgaag atcaaggagc
     2941 gggcagtgaa ctctcctgaa tcttcgcctg cttcttcatt ctccttcgtt tagctaatag
     3001 aataactgct gagttgtgaa cagtaaggtg tatgtgaggt gctcgaaaac aaggtttcag
     3061 gtgacgcccc cagaataaaa tttggacggg gggttcagtg gtggcattgt gctatgacac
     3121 caatataacc ctcacaaacc ccttgggcaa taaatactag tgtaggaatg aaacattctg
     3181 aatatcttta acaatagaaa tccatggggt ggggacaagc cgtaaagact ggatgtccat
     3241 ctcacacgaa tttatggcta tgggcaacac ataatcctag tgcaatatga tactggggtt
     3301 attaagatgt gtcccaggca gggaccaaga caggtgaacc atgttgttac actctatttg
     3361 taacaagggg aaagagagtg gacgccgaca gcagcggact ccactggttg tctctaacac
     3421 ccccgaaaat taaacggggc tccacgccaa tggggcccat aaacaaagac aagtggccac
     3481 tctttttttt gaaattgtgg agtgggggca cgcgtcagcc cccacacgcc gccctgcggt
     3541 tttggactgt aaaataaggg tgtaataact tggctgattg taaccccgct aaccactgcg
     3601 gtcaaaccac ttgcccacaa aaccactaat ggcaccccgg ggaatacctg cataagtagg
     3661 tgggcgggcc aagatagggg cgcgattgct gcgatctgga ggacaaatta cacacacttg
     3721 cgcctgagcg ccaagcacag ggttgttggt cctcatattc acgaggtcgc tgagagcacg
     3781 gtgggctaat gttgccatgg gtagcatata ctacccaaat atctggatag catatgctat
     3841 cctaatctat atctgggtag cataggctat cctaatctat atctgggtag catatgctat
     3901 cctaatctat atctgggtag tatatgctat cctaatttat atctgggtag cataggctat
     3961 cctaatctat atctgggtag catatgctat cctaatctat atctgggtag tatatgctat
     4021 cctaatctgt atccgggtag catatgctat cctaatagag attagggtag tatatgctat
     4081 cctaatttat atctgggtag catatactac ccaaatatct ggatagcata tgctatccta
     4141 atctatatct gggtagcata tgctatccta atctatatct gggtagcata ggctatccta
     4201 atctatatct gggtagcata tgctatccta atctatatct gggtagtata tgctatccta
     4261 atttatatct gggtagcata ggctatccta atctatatct gggtagcata tgctatccta
     4321 atctatatct gggtagtata tgctatccta atctgtatcc gggtagcata tgctatcctc
     4381 atgataagct gtcaaacatg agaattttct tgaagacgaa agggcctcgt gatacgccta
     4441 tttttatagg ttaatgtcat gataataatg gtttcttaga cgtcaggtgg cacttttcgg
     4501 ggaaatgtgc gcggaacccc tatttgttta tttttctaaa tacattcaaa tatgtatccg
     4561 ctcatgagac aataaccctg ataaatgctt caataatatt gaaaaaggaa gagtatgagt
     4621 attcaacatt tccgtgtcgc ccttattccc ttttttgcgg cattttgcct tcctgttttt
     4681 gctcacccag aaacgctggt gaaagtaaaa gatgctgaag atcagttggg tgcacgagtg
     4741 ggttacatcg aactggatct caacagcggt aagatccttg agagttttcg ccccgaagaa
     4801 cgttttccaa tgatgagcac ttttaaagtt ctgctatgtg gcgcggtatt atcccgtgtt
     4861 gacgccgggc aagagcaact cggtcgccgc atacactatt ctcagaatga cttggttgag
     4921 tactcaccag tcacagaaaa gcatcttacg gatggcatga cagtaagaga attatgcagt
     4981 gctgccataa ccatgagtga taacactgcg gccaacttac ttctgacaac gatcggagga
     5041 ccgaaggagc taaccgcttt tttgcacaac atgggggatc atgtaactcg ccttgatcgt
     5101 tgggaaccgg agctgaatga agccatacca aacgacgagc gtgacaccac gatgcctgca
     5161 gcaatggcaa caacgttgcg caaactatta actggcgaac tacttactct agcttcccgg
     5221 caacaattaa tagactggat ggaggcggat aaagttgcag gaccacttct gcgctcggcc
     5281 cttccggctg gctggtttat tgctgataaa tctggagccg gtgagcgtgg gtctcgcggt
     5341 atcattgcag cactggggcc agatggtaag ccctcccgta tcgtagttat ctacacgacg
     5401 gggagtcagg caactatgga tgaacgaaat agacagatcg ctgagatagg tgcctcactg
     5461 attaagcatt ggtaactgtc agaccaagtt tactcatata tactttagat tgatttaaaa
     5521 cttcattttt aatttaaaag gatctaggtg aagatccttt ttgataatct catgaccaaa
     5581 atcccttaac gtgagttttc gttccactga gcgtcagacc ccgtagaaaa gatcaaagga
     5641 tcttcttgag atcctttttt tctgcgcgta atctgctgct tgcaaacaaa aaaaccaccg
     5701 ctaccagcgg tggtttgttt gccggatcaa gagctaccaa ctctttttcc gaaggtaact
     5761 ggcttcagca gagcgcagat accaaatact gttcttctag tgtagccgta gttaggccac
     5821 cacttcaaga actctgtagc accgcctaca tacctcgctc tgctaatcct gttaccagtg
     5881 gctgctgcca gtggcgataa gtcgtgtctt accgggttgg actcaagacg atagttaccg
     5941 gataaggcgc agcggtcggg ctgaacgggg ggttcgtgca cacagcccag cttggagcga
     6001 acgacctaca ccgaactgag atacctacag cgtgagctat gagaaagcgc cacgcttccc
     6061 gaagggagaa aggcggacag gtatccggta agcggcaggg tcggaacagg agagcgcacg
     6121 agggagcttc cagggggaaa cgcctggtat ctttatagtc ctgtcgggtt tcgccacctc
     6181 tgacttgagc gtcgattttt gtgatgctcg tcaggggggc ggagcctatg gaaaaacgcc
     6241 agcaacgcgg cctttttacg gttcctggcc ttttgctggc cttttgctca catgttcttt
     6301 cctgcgttat cccctgattc tgtggataac cgtattaccg cctttgagtg agctgatacc
     6361 gctcgccgca gccgaacgac cgagcgcagc gagtcagtga gcgaggaagc ggaagagcgc
     6421 ccaatacgca aaccgcctct ccccgcgcgt tggccgattc attaatgcag ctggcacgac
     6481 aggtttcccg actggaaagc gggcagtgag cgcaacgcaa ttaatgtgag ttagctcact
     6541 cattaggcac cccaggcttt acactttatg cttccggctc gtatgttgtg tggaattgtg
     6601 agcggataac aatttcacac aggaaacagc tatgaccatg attacgccaa gctctagcta
     6661 gaggtcgacc aattctcatg tttgacagct tatcatcgca gatccgggca acgttgttgc
     6721 cattgctgca ggcgcagaac tggtaggtat ggaagatcta tacattgaat caatattggc
     6781 aattagccat attagtcatt ggttatatag cataaatcaa tattggctat tggccattgc
     6841 atacgttgta tctatatcat aatatgtaca tttatattgg ctcatgtcca atatgaccgc
     6901 catgtt
//
