LOCUS       sequence-258088-        2559 bp    DNA     linear   UNA 15-DEC-2025
DEFINITION  Env gene from HIV patient plasma in pcDNA3.1 expression vector.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      natural DNA sequence
  ORGANISM  unspecified
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Joshi A, Sedano M, Beauchamp B, Punke EB, Mulla ZD, Meza A, Alozie 
            OK, Mukherjee D, Garg H
  TITLE     HIV-1 Env Glycoprotein Phenotype along with Immune Activation 
            Determines CD4 T Cell Loss in HIV Patients.
  JOURNAL   J Immunol. 2016 Feb 15;196(4):1768-79. doi: 
            10.4049/jimmunol.1501588. Epub 2016 Jan 13.
  PUBMED    26764036
REFERENCE   2  (bases 1 to 2559)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; doi: 
            "10.4049/jimmunol.1501588"; journalName: "J Immunol"; date: 
            "2016-02-15- 15"; volume: "196"; issue: "4"; pages: "1768-79"
COMMENT     Sequence Label: pHP038Env
FEATURES             Location/Qualifiers
     source          1..2559
                     /mol_type="genomic DNA"
                     /organism="unspecified"
     misc_feature    1533..1766
                     /label=RRE
                     /note="The Rev response element (RRE) of HIV-1 allows for 
                     Rev-dependent mRNA export from the nucleus to the 
                     cytoplasm."
     CDS             2289..2315
                     /codon_start=1
                     /product="nuclear export signal from the HIV Rev protein 
                     (Fischer et al., 1995)"
                     /label=NES
                     /translation="LPPLERLTL"
ORIGIN
        1 atgagagtga tggggatcag gaagaactat cagcactggg gatggggcgc cttgctcctt
       61 gggatgttaa tgatgatgtg tagtgctgat caattgtggg tcacagtcta ttatggggta
      121 cctgtatgga aagaagcaac caccactcta ttttgtgcat cagatgctaa agcatatgat
      181 acagaggcac ataatgtttg ggccacacat gcctgtgtac ccacagaccc caacccacaa
      241 gagatacaat tagggaatgt aacagaaaat tttaacatgt ggaaaaatga catggtagaa
      301 caaatgcatg aggatataat cagtttatgg gatgagagcc taaagccatg tgtaaaatta
      361 accccactct gtgttatttt aaattgcact gatgtgaata ctactgatac cactactact
      421 agtgctgcta ataccactac tagtaagttg gacatagaga agggagaaat aaaaaactgc
      481 tctttcaaca tcaccacaag cataaatgat agggtggggg gttttgcata tttttataaa
      541 cttgatttag taccaataaa taatgatact agaagttata gattgctaaa ttgtaacacc
      601 tcagttatta aacaagcttg tccaaaagta tcctttgaac caattcccat acatttttgt
      661 gccccggctg gatttgcgat tataaagtgt aacaataaga cattcaatgg aaaaggacca
      721 tgtacaaatg ttagcacagt acaatgtaca catggaatta agccagtagt atcaactcaa
      781 ctgctgttaa atggcagtct agcagaagaa gaggtagtaa ttagatctga aaatatctca
      841 gacaatgcta aaaccataat agtacagttg aacgtatctg tagaaattaa ttgtacaaga
      901 cccaacaaca atacaagaaa aagtgtacac atgggaccag gaggtgcact ttataccaca
      961 gacataatag gagatataag aaaagcatat tgtaacctta gtaaaacaag ttgggaggac
     1021 accttagaaa aggtagttgg caaattaagg gagcaaattg gagataaaac aataatcttt
     1081 aatcaatcct caggagggga cccagaaatt gtaatgcaca gtgttaattg tggaggggag
     1141 tttttctact gtaacacagc gagactgttt aatagtactt ggggggttaa tagcacggga
     1201 aaatcaaata acaatgaaac acatatcata ctcccatgca gaataaaaca aattataaac
     1261 atgtggcaaa gagtaggaaa agcaatgtat aaccctccca tcagtggacc aattagttgt
     1321 acatcaaata ttacaggaat aatattaaca agagatggtg gacagaccaa tgacagtagc
     1381 actgagatct tcagacctgg aggaggagac atgagggata attggagaag tgaattatac
     1441 aaatataaag tagtaaaaat tgaaccatta ggagtagcac caaccaaggc aaggagaaga
     1501 gtggtgcaga gagaaaaaag agcaatagga ctaggagctc tgttccttgg gttcttggga
     1561 gcagcaggaa gcactatggg cgcagcgtca ttgacgctga cggtacaggc cagacaatta
     1621 ttgtctggta tagtgcaaca gcagaacaat ttgctgagag ctattgaggc gcaacagcat
     1681 ctgttgcaac tcacagtctg gggcattaag cagctccagg caagagtcct ggctgtggaa
     1741 agatatctaa aggatcaaca gctcctgggg atttggggtt gctctggaaa actcatctgc
     1801 accactactg tgccttggaa tgcttcttgg agtaacaaaa atctaactca gatttggaat
     1861 aacatgacct ggatacagtg ggaaaaagaa attggcaatg tcacagaggt aatataccaa
     1921 ttaattacag actcgcaaat ccagcaagaa aagaatgaaa aagacttatt ggagttagat
     1981 aaatgggcaa gtttgtggaa ttggtttgac ataacaaatt ggctgtggta tataaaaata
     2041 ttcataatga tagtaggagg cttaataggt ttaagaatag tttttactgt gctttctata
     2101 gtgaatagag ttaggcaggg atactcacca ttgtcgttcc agacccacca cccaactcca
     2161 gagggacccg gcaggcccga aggaatcgaa ggagaaggtg gagagagaga cagaggcaca
     2221 tccaggccat tagtggatgg attcttagca atcatctggg tcgacctacg gagcctgttc
     2281 ctcttcagct accaccgctt gagagactta ctcttgattg taacgaggat tgtggaactt
     2341 ctgggacgca gggggtggga agccctcaaa tattggtgga atctcctgca gtattggatt
     2401 caggaactaa agagtagtgc tgttagcttg tttaatgcca tagccatagc agtagctgag
     2461 gggacagata ggattataga aatagtgcaa agagctttta gagctattct ccatatacct
     2521 agaagaataa gacagggttt ggaaagggct ctgcaataa
//
