LOCUS       sequence-303059-        8386 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  Mammalian expression of secreted protein fused to 
            Fc(DAPA)-Avi-6xHis..
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 8386)
  AUTHORS   Wojtowicz WM, Vielmetter J, Fernandes RA, Siepe DH, Eastman CL, 
            Chisholm GB, Cox S, Klock H, Anderson PW, Rue SM, Miller JJ, Glaser 
            SM, Bragstad ML, Vance J, Lam AW, Lesley SA, Zinn K, Garcia KC
  TITLE     A Human IgSF Cell-Surface Interactome Reveals a Complex Network of 
            Protein-Protein Interactions.
  JOURNAL   Cell. 2020 Aug 20;182(4):1027-1043.e17. doi: 
            10.1016/j.cell.2020.07.025.
  PUBMED    32822567
REFERENCE   2  (bases 1 to 8386)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; doi: 
            "10.1016/j.cell.2020.07"; journalName: "Cell"; date: "2020-08-20- 
            20"; volume: "182"; issue: "4"; pages: "1027-1043.e17"
COMMENT     Sequence Label: pD649-HAsp-SEMA3G-Fc(DAPA)-AviTag-6xHis
FEATURES             Location/Qualifiers
     source          1..8386
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     124..143
                     /label=Kan-R
                     /note="Kanamycin resistance gene, reverse primer"
     primer_bind     149..168
                     /label=pENTR-R
                     /note="pENTR vectors, reverse primer"
     rep_origin      254..842
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     743..762
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     primer_bind     996..1013
                     /label=L4440
                     /note="L4440 vector, forward primer"
     primer_bind     1111..1128
                     /label=M13 Forward
                     /note="In lacZ gene. Also called M13-F20 or M13 (-21) 
                     Forward"
     primer_bind     1112..1128
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    1584..1600
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     enhancer        1767..2146
                     /label=CMV enhancer
                     /note="human cytomegalovirus immediate early enhancer"
     promoter        2147..2350
                     /label=CMV promoter
                     /note="human cytomegalovirus (CMV) immediate early 
                     promoter"
     primer_bind     2301..2321
                     /label=CMV-F
                     /note="Human CMV immediate early promoter, forward primer"
     primer_bind     2347..2371
                     /label=LNCX
                     /note="Human CMV promoter, forward primer"
     promoter        2581..2599
                     /label=SP6 promoter
                     /note="promoter for bacteriophage SP6 RNA polymerase"
     primer_bind     2581..2598
                     /label=SP6
                     /note="SP6 promoter, forward primer"
     primer_bind     2612..2631
                     /label=pMT2-F
                     /note="Synthetic intron, forward primer"
     CDS             5728..5772
                     /codon_start=1
                     /product="peptide tag that allows for enzymatic 
                     biotinylation"
                     /label=AviTag(TM)
                     /translation="GLNDIFEAQKIEWHE"
     CDS             5773..5790
                     /codon_start=1
                     /product="6xHis affinity tag"
                     /label=6xHis
                     /translation="HHHHHH"
     primer_bind     complement(5930..5947)
                     /label=BGH-rev
                     /note="Bovine growth hormone terminator, reverse primer. 
                     Also called BGH reverse"
     polyA_signal    5936..6047
                     /label=bGH poly(A) signal
                     /note="bovine growth hormone polyadenylation signal"
     primer_bind     complement(6165..6185)
                     /label=pBABE 3'
                     /note="SV40 enhancer, reverse primer for pBABE vectors"
     promoter        6170..6499
                     /label=SV40 promoter
                     /note="SV40 enhancer and early promoter"
     rep_origin      6350..6485
                     /label=SV40 ori
                     /note="SV40 origin of replication"
     primer_bind     6412..6431
                     /label=SV40pro-F
                     /note="SV40 promoter/origin, forward primer"
     promoter        6547..6594
                     /label=EM7 promoter
                     /note="synthetic bacterial promoter "
     CDS             6613..7212
                     /codon_start=1
                     /gene="pac from Streptomyces alboniger"
                     /product="puromycin N-acetyltransferase"
                     /label=PuroR
                     /note="confers resistance to puromycin"
                     /translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
                     VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
                     AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
                     APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
     primer_bind     complement(6613..6632)
                     /label=Puro-R
                     /note="Puromycin resistance gene, reverse primer. Also 
                     called puro-variant-R"
     primer_bind     7109..7129
                     /label=Puro-F
                     /note="Puromycin resistance gene, forward primer"
     polyA_signal    7342..7463
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     primer_bind     complement(7379..7398)
                     /label=SV40pA-R
                     /note="SV40 polyA, reverse primer"
     primer_bind     7433..7452
                     /label=EBV-rev
                     /note="SV40 polyA terminator, reverse primer"
     CDS             complement(join(7516..8307,8308..8376))
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     8139..8158
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     promoter        complement(join(8377..8386,1..82))
                     /gene="bla"
                     /label=AmpR promoter
ORIGIN
        1 tttcaatatt attgaagcat ttatcagggt tattgtctca tgagcggata catatttgaa
       61 tgtatttaga aaaataaaca aataggggtc agtgttacaa ccaattaacc aattctgaac
      121 attatcgcga gcccatttat acctgaatat ggctcataac accccttgct catgaccaaa
      181 atcccttaac gtgagttacg cgcgcgtcgt tccactgagc gtcagacccc gtagaaaaga
      241 tcaaaggatc ttcttgagat cctttttttc tgcgcgtaat ctgctgcttg caaacaaaaa
      301 aaccaccgct accagcggtg gtttgtttgc cggatcaaga gctaccaact ctttttccga
      361 aggtaactgg cttcagcaga gcgcagatac caaatactgt tcttctagtg tagccgtagt
      421 tagcccacca cttcaagaac tctgtagcac cgcctacata cctcgctctg ctaatcctgt
      481 taccagtggc tgctgccagt ggcgataagt cgtgtcttac cgggttggac tcaagacgat
      541 agttaccgga taaggcgcag cggtcgggct gaacgggggg ttcgtgcaca cagcccagct
      601 tggagcgaac gacctacacc gaactgagat acctacagcg tgagctatga gaaagcgcca
      661 cgcttcccga agggagaaag gcggacaggt atccggtaag cggcagggtc ggaacaggag
      721 agcgcacgag ggagcttcca gggggaaacg cctggtatct ttatagtcct gtcgggtttc
      781 gccacctctg acttgagcgt cgatttttgt gatgctcgtc aggggggcgg agcctatgga
      841 aaaacgccag caacgcggcc tttttacggt tcctggcctt ttgctggcct tttgctcaca
      901 tgttctttcc tgcgttatcc cctgattctg tggataaccg tattaccgcc tttgagtgag
      961 ctgataccgc tcgccgcagc cgaacgaccg agcgcagcga gtcagtgagc gaggaagcgg
     1021 aaggcgagag tagggaactg ccaggcatca aactaagcag aaggcccctg acggatggcc
     1081 tttttgcgtt tctacaaact ctttctgtgt tgtaaaacga cggccagtct taagctcggg
     1141 ccccctgggc ggttctgata acgagtaatc gttaatccgc aaataacgta aaaacccgct
     1201 tcggcgggtt tttttatggg gggagtttag ggaaagagca tttgtcagaa tatttaaggg
     1261 cgcctgtcac tttgcttgat atatgagaat tatttaacct tataaatgag aaaaaagcaa
     1321 cgcactttaa ataagatacg ttgctttttc gattgatgaa cacctataat taaactattc
     1381 atctattatt tatgattttt tgtatataca atatttctag tttgttaaag agaattaaga
     1441 aaataaatct cgaaaataat aaagggaaaa tcagtttttg atatcaaaat tatacatgtc
     1501 aacgataata caaaatataa tacaaactat aagatgttat cagtatttat tatcatttag
     1561 aataaatttt gtgtcgccct taattgtgag cggataacaa ttacgagctt catgcacagt
     1621 ggcgttgact caatattggc cattagccat attattcatt ggttatatag cataaatcaa
     1681 tattggctat tggccattgc atacgttgta tctatatcat aatatgtaca tttatattgg
     1741 ctcatgtcca atatgaccgc catgttggca ttgattattg actagttatt aatagtaatc
     1801 aattacgggg tcattagttc atagcccata tatggagttc cgcgttacat aacttacggt
     1861 aaatggcccg cctggctgac cgcccaacga cccccgccca ttgacgtcaa taatgacgta
     1921 tgttcccata gtaacgccaa tagggacttt ccattgacgt caatgggtgg agtatttacg
     1981 gtaaactgcc cacttggcag tacatcaagt gtatcatatg ccaagtacgc cccctattga
     2041 cgtcaatgac ggtaaatggc ccgcctggca ttatgcccag tacatgacct tatgggactt
     2101 tcctacttgg cagtacatct acgtattagt catcgctatt accatggtga tgcggttttg
     2161 gcagtacatc aatgggcgtg gatagcggtt tgactcacgg ggatttccaa gtctccaccc
     2221 cattgacgtc aatgggagtt tgttttggca ccaaaatcaa cgggactttc caaaatgtcg
     2281 taacaactcc gccccattga cgcaaatggg cggtaggcgt gtacggtggg aggtctatat
     2341 aagcagagct cgtttagtga accgtcagat cgcctggaga cgccatccac gctgttttga
     2401 cctccataga agacaccggg accgatccag cctccgcggc cgggaacggt gcattggaac
     2461 gcggattccc cgtgccaaga gtgacgtaag taccgcctat agagtctata ggcccacccc
     2521 cttggcttcg ttagaacgcg gctacaatta atacataacc ttatgtatca tacacatacg
     2581 atttaggtga cactatagaa taacatccac tttgcctttc tctccacagg tgtccactcc
     2641 caggtccaac tgcacctcgg ttctatcgaa aacgcgcctg ctagcgccac catgaagacc
     2701 atcattgccc tgagctacat cttctgcctg gtgttcgctg cggccgccgg accttctcct
     2761 ggaccttctg ttcctagact gcggctgagc tacagggatc tgctgagcgc caatcggagc
     2821 gccatctttc ttggccctca aggcagcctg aacctgcagg ccatgtacct ggacgagtac
     2881 cgggacagac tgtttctcgg aggactggac gccctgtaca gcctgagact ggatcaggct
     2941 tggcccgatc ctagagaagt gctgtggcct cctcaacctg gccagaggga agagtgtgtc
     3001 cggaagggaa gagatcccct gaccgagtgc gccaattttg tgcgagtgct gcagccccac
     3061 aacagaaccc atctgctggc ttgtggcacc ggcgcctttc agcctacatg tgccctgatc
     3121 acagtgggcc acagaggcga acatgtgctg cacctggaac ctggctctgt ggaatctggc
     3181 agaggcagat gtccccacga gcctagcaga cctttcgcca gcaccttcat cgacggcgag
     3241 ctgtacacag gcctgaccgc cgattttctg ggcagagaag ccatgatctt cagaagcggc
     3301 ggacccagac ctgctctgag aagcgatagc gatcagagcc tgctgcacga ccccagattt
     3361 gtgatggccg ccagaattcc cgagaacagc gaccaggaca acgacaaggt gtacttcttc
     3421 ttctccgaaa ccgtgccttc tccagacggc ggctctaatc acgtgaccgt gtccagagtg
     3481 ggcagagtgt gcgttaacga tgccggcgga cagagggtgc tcgtgaacaa gtggtccacc
     3541 ttcctgaagg ccagactcgt gtgtagcgtg ccaggacctg gcggagccga gacacatttt
     3601 gaccagctgg aagatgtgtt cctgctctgg cctaaggccg gcaagagcct ggaagtgtac
     3661 gccctgttta gcaccgtgtc cgccgtgttt cagggcttcg ccgtgtgtgt gtaccacatg
     3721 gccgacatct gggaagtgtt caacggcccc ttcgctcaca gagatggacc tcagcatcag
     3781 tggggccctt atggcggcaa ggtgcccttt cctagacctg gcgtgtgccc cagcaagatg
     3841 acagctcaac ccggcagacc attcggctcc accaaggact atcctgacga ggtgctgcag
     3901 ttcgccagag cacaccctct gatgttctgg cctgtgcggc ctagacatgg cagacctgtg
     3961 ctggtcaaga cccatctggc tcagcagctg caccagatcg tggtggatag agtggaagcc
     4021 gaggacggaa cctacgacgt gatcttcctg ggcacagata gcggcagcgt gctgaaagtg
     4081 attgccctgc aagctggcgg aagcgccgaa cctgaagaag tggtgctgga agaactccag
     4141 gtgttcaagg tgccaacacc tatcaccgag atggaaatca gcgtgaagcg gcagatgctg
     4201 tacgtgggca gcagactggg agttgcccag ctgagactgc accagtgtga aacctacgga
     4261 accgcctgcg ccgagtgttg ccttgccaga gatccttact gtgcctggga tggcgccagc
     4321 tgtacccact atagacctag cctgggcaaa agacggttcc ggcggcagga tatcagacac
     4381 ggcaatcccg ctctgcagtg tctgggccag tctcaagaag aagaggccgt tggactggtg
     4441 gccgccacaa tggtgtatgg caccgagcac aacagcacct ttctggaatg cctgcctaag
     4501 agccctcagg ccgctgttag atggctgctg caaagaccag gcgacgaggg ccccgatcaa
     4561 gtgaaaaccg atgaacgggt gctgcacacc gagagaggcc tgctgtttcg cagactgagc
     4621 agatttgacg ccggcaccta cacctgtacc acactggaac acggcttcag ccagacagtc
     4681 gttaggctgg ccctggtggt tatcgtggct tcccagctgg acaatctgtt cccacctgag
     4741 cctaagcctg aggaacctcc tgctagaggc ggactggctt ctacacctcc taaggcctgg
     4801 tataaggaca tcctgcagct gatcggcttc gccaacctgc ctagagtgga tgagtactgc
     4861 gagcgcgtgt ggtgtagagg caccacagag tgcagcggct gcttcagatc cagaagcaga
     4921 ggcaagcagg ccaggggcaa atcttgggct ggactggaac tgggcaagaa aatgaagtcc
     4981 cgggtgcacg ccgaacacaa caggacacct agagaggtgg aagccacagg cgcgccgggc
     5041 ggcgacaaga cccacacctg ccccccctgc ccagctccag aactgctggg agggccttcc
     5101 gtgttcctgt tcccccccaa gcccaaggac accctgatga tcagcaggac ccccgaggtg
     5161 acctgcgtgg tggtggccgt gtcccacgag gacccagagg tgaagttcaa ctggtacgtg
     5221 gacggcgtgg aggtgcacaa cgccaagacc aagcccagag aggagcagta caacagcacc
     5281 tacagggtgg tgtccgtgct gaccgtgctg caccaggact ggctgaacgg caaagaatac
     5341 aagtgcaaag tctccaacaa ggccctggct gccccaatcg aaaagacaat cagcaaggcc
     5401 aagggccagc cacgggagcc ccaggtgtac accctgcccc ccagccggga ggagatgacc
     5461 aagaaccagg tgtccctgac ctgtctggtg aagggcttct accccagcga tatcgccgtg
     5521 gagtgggaga gcaacggcca gcccgagaac aactacaaga ccaccccccc agtgctggac
     5581 agcgacggca gcttcttcct gtacagcaag ctgaccgtgg acaagtccag gtggcagcag
     5641 ggcaacgtgt tcagctgcag cgtgatgcac gaggccctgc acaaccacta cacccagaag
     5701 tccctgagcc tgagccccgg cggcagcggt cttaatgata ttttcgaggc tcagaagatt
     5761 gagtggcatg aacaccacca ccatcaccac taaggccggc ctgtagtcac tggcacaacg
     5821 cgttacccgg taagccaatc gggtatacac ggtcgtcata ctgcagacag ggttcttcta
     5881 ctttgcaaga tagtcttgag tagtaaaata aatagataga gaaaatcagc ctcgactgtg
     5941 ccttctagtt gccagccatc tgttgtttgc ccctcccccg tgccttcctt gaccctggaa
     6001 ggtgccactc ccactgtcct ttcctaataa aatgaggaaa ttgcatcaca acactcaacc
     6061 ctatctcggt ctattctttt gatttataag ggattttgcc gatttcggcc tattggttaa
     6121 aaaatgagct gatttaacaa aaatttaacg cgaattaatt ctgtggaatg tgtgtcagtt
     6181 agggtgtgga aagtccccag gctccccagc aggcagaagt atgcaaagca tgcatctcaa
     6241 ttagtcagca accaggtgtg gaaagtcccc aggctcccca gcaggcagaa gtatgcaaag
     6301 catgcatctc aattagtcag caaccatagt cccgccccta actccgccca tcccgcccct
     6361 aactccgccc agttccgccc attctccgcc ccatggctga ctaatttttt ttatttatgc
     6421 agaggccgag gccgcctctg cctctgagct attccagaag tagtgaggag gcttttttgg
     6481 aggcctaggc ttttgcaaaa agctcccggg agcttgtata tccattttcg gatctgatca
     6541 gcacgtgttg acaattaatc atcggcatag tatatcggca tagtataata cgacaaggtg
     6601 aggaactaaa ccatgaccga gtacaagccc acggtgcgcc tcgccacccg cgacgacgtc
     6661 cccagggccg tacgcaccct cgccgccgcg ttcgccgact accccgccac gcgccacacc
     6721 gtcgatccgg accgccacat cgagcgggtc accgagctgc aagaactctt cctcacgcgc
     6781 gtcgggctcg acatcggcaa ggtgtgggtc gcggacgacg gcgccgcggt ggcggtctgg
     6841 accacgccgg agagcgtcga agcgggggcg gtgttcgccg agatcggccc gcgcatggcc
     6901 gagttgagcg gttcccggct ggccgcgcag caacagatgg aaggcctcct ggcgccgcac
     6961 cggcccaagg agcccgcgtg gttcctggcc accgtcggcg tctcgcccga ccaccagggc
     7021 aagggtctgg gcagcgccgt cgtgctcccc ggagtggagg cggccgagcg cgccggggtg
     7081 cccgccttcc tggagacatc cgcgccccgc aacctcccct tctacgagcg gctcggcttc
     7141 accgtcaccg ccgacgtcga ggtgcccgaa ggaccgcgca cctggtgcat gacccgcaag
     7201 cccggtgcct gacacgtgct acgagatttc gattccaccg ccgccttcta tgaaaggttg
     7261 ggcttcggaa tcgttttccg ggacgccggc tggatgatcc tccagcgcgg ggatctcatg
     7321 ctggagttct tcgcccaccc caacttgttt attgcagctt ataatggtta caaataaagc
     7381 aatagcatca caaatttcac aaataaagca tttttttcac tgcattctag ttgtggtttg
     7441 tccaaactca tcaatgtatc ttatcatgtc tgtataccgt cgacctctag ctagagcttg
     7501 gcgtaatcat ggtcattacc aatgcttaat cagtgaggca cctatctcag cgatctgtct
     7561 atttcgttca tccatagttg cctgactccc cgtcgtgtag ataactacga tacgggaggg
     7621 cttaccatct ggccccagcg ctgcgatgat accgcgagaa ccacgctcac cggctccgga
     7681 tttatcagca ataaaccagc cagccggaag ggccgagcgc agaagtggtc ctgcaacttt
     7741 atccgcctcc atccagtcta ttaattgttg ccgggaagct agagtaagta gttcgccagt
     7801 taatagtttg cgcaacgttg ttgccatcgc tacaggcatc gtggtgtcac gctcgtcgtt
     7861 tggtatggct tcattcagct ccggttccca acgatcaagg cgagttacat gatcccccat
     7921 gttgtgcaaa aaagcggtta gctccttcgg tcctccgatc gttgtcagaa gtaagttggc
     7981 cgcagtgtta tcactcatgg ttatggcagc actgcataat tctcttactg tcatgccatc
     8041 cgtaagatgc ttttctgtga ctggtgagta ctcaaccaag tcattctgag aatagtgtat
     8101 gcggcgaccg agttgctctt gcccggcgtc aatacgggat aataccgcgc cacatagcag
     8161 aactttaaaa gtgctcatca ttggaaaacg ttcttcgggg cgaaaactct caaggatctt
     8221 accgctgttg agatccagtt cgatgtaacc cactcgtgca cccaactgat cttcagcatc
     8281 ttttactttc accagcgttt ctgggtgagc aaaaacagga aggcaaaatg ccgcaaaaaa
     8341 gggaataagg gcgacacgga aatgttgaat actcatattc ttcctt
//
