LOCUS       sequence-304099-        9031 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  Mammalian expression of cell-surface protein extracellular domain 
            fused to COMP5AP-AviTag-9xHis. Protein is secreted from cells..
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 9031)
  AUTHORS   Wojtowicz WM, Vielmetter J, Fernandes RA, Siepe DH, Eastman CL, 
            Chisholm GB, Cox S, Klock H, Anderson PW, Rue SM, Miller JJ, Glaser 
            SM, Bragstad ML, Vance J, Lam AW, Lesley SA, Zinn K, Garcia KC
  TITLE     A Human IgSF Cell-Surface Interactome Reveals a Complex Network of 
            Protein-Protein Interactions.
  JOURNAL   Cell. 2020 Aug 20;182(4):1027-1043.e17. doi: 
            10.1016/j.cell.2020.07.025.
  PUBMED    32822567
REFERENCE   2  (bases 1 to 9031)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; doi: 
            "10.1016/j.cell.2020.07"; journalName: "Cell"; date: "2020-08-20- 
            20"; volume: "182"; issue: "4"; pages: "1027-1043.e17"
COMMENT     Sequence Label: pD649-HAsp-ERBB4-COMP5AP-AviTag-9xHis
FEATURES             Location/Qualifiers
     source          1..9031
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     124..143
                     /label=Kan-R
                     /note="Kanamycin resistance gene, reverse primer"
     primer_bind     149..168
                     /label=pENTR-R
                     /note="pENTR vectors, reverse primer"
     rep_origin      254..842
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     743..762
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     primer_bind     996..1013
                     /label=L4440
                     /note="L4440 vector, forward primer"
     primer_bind     1111..1128
                     /label=M13 Forward
                     /note="In lacZ gene. Also called M13-F20 or M13 (-21) 
                     Forward"
     primer_bind     1112..1128
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    1584..1600
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     enhancer        1767..2146
                     /label=CMV enhancer
                     /note="human cytomegalovirus immediate early enhancer"
     promoter        2147..2350
                     /label=CMV promoter
                     /note="human cytomegalovirus (CMV) immediate early 
                     promoter"
     primer_bind     2301..2321
                     /label=CMV-F
                     /note="Human CMV immediate early promoter, forward primer"
     primer_bind     2347..2371
                     /label=LNCX
                     /note="Human CMV promoter, forward primer"
     promoter        2581..2599
                     /label=SP6 promoter
                     /note="promoter for bacteriophage SP6 RNA polymerase"
     primer_bind     2581..2598
                     /label=SP6
                     /note="SP6 promoter, forward primer"
     primer_bind     2612..2631
                     /label=pMT2-F
                     /note="Synthetic intron, forward primer"
     CDS             4636..4671
                     /codon_start=1
                     /product="epitope tag derived from human Protein C (Stearns
                     et al., 1988)"
                     /label=Protein C tag
                     /translation="EDQVDPRLIDGK"
     CDS             4681..4704
                     /codon_start=1
                     /product="recognition and cleavage site for human 
                     rhinovirus 3C and PreScission proteases"
                     /label=HRV 3C site
                     /translation="LEVLFQGP"
     CDS             6364..6408
                     /codon_start=1
                     /product="peptide tag that allows for enzymatic 
                     biotinylation"
                     /label=AviTag(TM)
                     /translation="GLNDIFEAQKIEWHE"
     CDS             6409..6435
                     /codon_start=1
                     /product="9xHis affinity tag"
                     /label=9xHis
                     /translation="HHHHHHHHH"
     primer_bind     complement(6575..6592)
                     /label=BGH-rev
                     /note="Bovine growth hormone terminator, reverse primer. 
                     Also called BGH reverse"
     polyA_signal    6581..6692
                     /label=bGH poly(A) signal
                     /note="bovine growth hormone polyadenylation signal"
     primer_bind     complement(6810..6830)
                     /label=pBABE 3'
                     /note="SV40 enhancer, reverse primer for pBABE vectors"
     promoter        6815..7144
                     /label=SV40 promoter
                     /note="SV40 enhancer and early promoter"
     rep_origin      6995..7130
                     /label=SV40 ori
                     /note="SV40 origin of replication"
     primer_bind     7057..7076
                     /label=SV40pro-F
                     /note="SV40 promoter/origin, forward primer"
     promoter        7192..7239
                     /label=EM7 promoter
                     /note="synthetic bacterial promoter "
     CDS             7258..7857
                     /codon_start=1
                     /gene="pac from Streptomyces alboniger"
                     /product="puromycin N-acetyltransferase"
                     /label=PuroR
                     /note="confers resistance to puromycin"
                     /translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
                     VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
                     AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
                     APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
     primer_bind     complement(7258..7277)
                     /label=Puro-R
                     /note="Puromycin resistance gene, reverse primer. Also 
                     called puro-variant-R"
     primer_bind     7754..7774
                     /label=Puro-F
                     /note="Puromycin resistance gene, forward primer"
     polyA_signal    7987..8108
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     primer_bind     complement(8024..8043)
                     /label=SV40pA-R
                     /note="SV40 polyA, reverse primer"
     primer_bind     8078..8097
                     /label=EBV-rev
                     /note="SV40 polyA terminator, reverse primer"
     CDS             complement(join(8161..8952,8953..9021))
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     8784..8803
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     promoter        complement(join(9022..9031,1..82))
                     /gene="bla"
                     /label=AmpR promoter
ORIGIN
        1 tttcaatatt attgaagcat ttatcagggt tattgtctca tgagcggata catatttgaa
       61 tgtatttaga aaaataaaca aataggggtc agtgttacaa ccaattaacc aattctgaac
      121 attatcgcga gcccatttat acctgaatat ggctcataac accccttgct catgaccaaa
      181 atcccttaac gtgagttacg cgcgcgtcgt tccactgagc gtcagacccc gtagaaaaga
      241 tcaaaggatc ttcttgagat cctttttttc tgcgcgtaat ctgctgcttg caaacaaaaa
      301 aaccaccgct accagcggtg gtttgtttgc cggatcaaga gctaccaact ctttttccga
      361 aggtaactgg cttcagcaga gcgcagatac caaatactgt tcttctagtg tagccgtagt
      421 tagcccacca cttcaagaac tctgtagcac cgcctacata cctcgctctg ctaatcctgt
      481 taccagtggc tgctgccagt ggcgataagt cgtgtcttac cgggttggac tcaagacgat
      541 agttaccgga taaggcgcag cggtcgggct gaacgggggg ttcgtgcaca cagcccagct
      601 tggagcgaac gacctacacc gaactgagat acctacagcg tgagctatga gaaagcgcca
      661 cgcttcccga agggagaaag gcggacaggt atccggtaag cggcagggtc ggaacaggag
      721 agcgcacgag ggagcttcca gggggaaacg cctggtatct ttatagtcct gtcgggtttc
      781 gccacctctg acttgagcgt cgatttttgt gatgctcgtc aggggggcgg agcctatgga
      841 aaaacgccag caacgcggcc tttttacggt tcctggcctt ttgctggcct tttgctcaca
      901 tgttctttcc tgcgttatcc cctgattctg tggataaccg tattaccgcc tttgagtgag
      961 ctgataccgc tcgccgcagc cgaacgaccg agcgcagcga gtcagtgagc gaggaagcgg
     1021 aaggcgagag tagggaactg ccaggcatca aactaagcag aaggcccctg acggatggcc
     1081 tttttgcgtt tctacaaact ctttctgtgt tgtaaaacga cggccagtct taagctcggg
     1141 ccccctgggc ggttctgata acgagtaatc gttaatccgc aaataacgta aaaacccgct
     1201 tcggcgggtt tttttatggg gggagtttag ggaaagagca tttgtcagaa tatttaaggg
     1261 cgcctgtcac tttgcttgat atatgagaat tatttaacct tataaatgag aaaaaagcaa
     1321 cgcactttaa ataagatacg ttgctttttc gattgatgaa cacctataat taaactattc
     1381 atctattatt tatgattttt tgtatataca atatttctag tttgttaaag agaattaaga
     1441 aaataaatct cgaaaataat aaagggaaaa tcagtttttg atatcaaaat tatacatgtc
     1501 aacgataata caaaatataa tacaaactat aagatgttat cagtatttat tatcatttag
     1561 aataaatttt gtgtcgccct taattgtgag cggataacaa ttacgagctt catgcacagt
     1621 ggcgttgact caatattggc cattagccat attattcatt ggttatatag cataaatcaa
     1681 tattggctat tggccattgc atacgttgta tctatatcat aatatgtaca tttatattgg
     1741 ctcatgtcca atatgaccgc catgttggca ttgattattg actagttatt aatagtaatc
     1801 aattacgggg tcattagttc atagcccata tatggagttc cgcgttacat aacttacggt
     1861 aaatggcccg cctggctgac cgcccaacga cccccgccca ttgacgtcaa taatgacgta
     1921 tgttcccata gtaacgccaa tagggacttt ccattgacgt caatgggtgg agtatttacg
     1981 gtaaactgcc cacttggcag tacatcaagt gtatcatatg ccaagtacgc cccctattga
     2041 cgtcaatgac ggtaaatggc ccgcctggca ttatgcccag tacatgacct tatgggactt
     2101 tcctacttgg cagtacatct acgtattagt catcgctatt accatggtga tgcggttttg
     2161 gcagtacatc aatgggcgtg gatagcggtt tgactcacgg ggatttccaa gtctccaccc
     2221 cattgacgtc aatgggagtt tgttttggca ccaaaatcaa cgggactttc caaaatgtcg
     2281 taacaactcc gccccattga cgcaaatggg cggtaggcgt gtacggtggg aggtctatat
     2341 aagcagagct cgtttagtga accgtcagat cgcctggaga cgccatccac gctgttttga
     2401 cctccataga agacaccggg accgatccag cctccgcggc cgggaacggt gcattggaac
     2461 gcggattccc cgtgccaaga gtgacgtaag taccgcctat agagtctata ggcccacccc
     2521 cttggcttcg ttagaacgcg gctacaatta atacataacc ttatgtatca tacacatacg
     2581 atttaggtga cactatagaa taacatccac tttgcctttc tctccacagg tgtccactcc
     2641 caggtccaac tgcacctcgg ttctatcgaa aacgcgcctg ctagcgccac catgaagacc
     2701 atcattgccc tgagctacat cttctgcctg gtgttcgctg cggccgccca atctgtttgt
     2761 gccggaaccg agaacaagct gagcagcctg agcgacctgg aacagcagta cagagccctg
     2821 cggaagtact acgagaactg cgaggtggtc atgggcaacc tggaaatcac cagcatcgag
     2881 cacaaccggg acctgagctt cctgagatct gtgcgggaag tgaccggcta tgtgctggtg
     2941 gccctgaacc agttcagata cctgcctctg gaaaacctgc ggatcatccg gggcaccaag
     3001 ctgtacgagg atagatacgc cctggccatc ttcctgaact accggaagga cggcaacttc
     3061 ggcctgcaag agctgggcct gaagaacctg accgagatcc tgaatggcgg cgtgtacgtg
     3121 gaccagaaca agttcctgtg ctacgccgac accatccact ggcaggacat cgtgcgaaac
     3181 ccctggccta gcaatctgac cctggtgtcc acaaatggca gcagcggctg tggcagatgc
     3241 cacaagtctt gcaccggcag atgttggggc cctaccgaga atcactgcca gacactgacc
     3301 agaaccgtgt gcgccgagca gtgcgacgga agatgttatg gcccctacgt gtccgactgc
     3361 tgccacagag aatgtgccgg cggatgtagc ggccccaagg atacagattg cttcgcctgc
     3421 atgaacttca acgacagcgg cgcctgcgtg acccagtgtc ctcagacctt cgtgtacaac
     3481 cccaccacct ttcagctgga acacaacttc aatgccaagt atacctacgg cgccttctgc
     3541 gtgaagaagt gccctcacaa cttcgtggtg gacagcagct cttgtgtgcg ggcctgtcct
     3601 agcagcaaga tggaagtgga agagaacggc atcaagatgt gcaagccctg caccgacatc
     3661 tgccctaagg cctgtgatgg catcggaacc ggcagcctga tgtctgccca gacagtggac
     3721 agctccaaca tcgacaagtt catcaactgc accaagatca acggcaacct gatcttcctc
     3781 gtgaccggca tccacggcga cccctataat gccatcgagg ccatcgatcc cgagaagctg
     3841 aacgtgttca ggaccgtgcg cgagatcacc ggctttctga acatccagag ctggcctcca
     3901 aacatgaccg acttcagcgt gttcagcaac ctggtcacca tcggcggcag agtgctgtac
     3961 tctggactga gcctgctgat cctgaagcag cagggcatca ccagcctgca gttccagagc
     4021 ctgaaagaga tcagcgccgg caacatctac atcaccgaca actccaatct gtgctactac
     4081 cacacgatca actggaccac actgttcagc accatcaacc agcggatcgt gatccgggac
     4141 aaccggaagg ccgaaaactg taccgctgaa ggcatggtct gcaaccacct gtgtagcagc
     4201 gacggctgtt ggggacctgg acctgatcag tgcctgagct gcagaagatt cagccggggc
     4261 agaatctgca tcgagagctg caacctgtac gacggcgagt tcagagagtt cgagaacggc
     4321 tccatctgcg tggaatgcga ccctcagtgc gagaaaatgg aagatggact gctgacctgt
     4381 cacggccctg gaccagacaa ttgcaccaag tgcagccact tcaaggacgg ccccaattgc
     4441 gtggaaaagt gtcccgatgg actccagggc gccaacagct tcatctttaa gtacgccgat
     4501 cctgacagag agtgtcaccc ttgtcacccc aactgtaccc agggctgtaa tggccctacc
     4561 agccacgact gcatctacta cccttggacc ggccacagca cactgcctca gcatgctaga
     4621 acacctggcg cgccggaaga tcaagttgat ccaagattga ttgatggcaa gggcggatct
     4681 ctggaggtgc tgttccaggg accaggcgga agcggcaatc ccggcggcga tctggccccc
     4741 cagatgctgc gcgagctgca ggagaccaat gccgccctgc aggacgtgcg cgagctgctg
     4801 cgccaccgcg tgaaggagat caccttcctg aagaacaccg tgatggagtg cgacgcctgc
     4861 ggtatgcagc cctctagagg ctccggctcc atcatcccag ttgaggagga gaacccggac
     4921 ttctggaacc gcgaggcagc cgaggccctg ggtgccgcca agaagctgca gcctgcacag
     4981 acagccgcca agaacctcat catcttcctg ggcgatggga tgggggtgtc tacggtgaca
     5041 gctgccagga tcctaaaagg gcagaagaag gacaaactgg ggcctgagat acccctggcc
     5101 atggaccgct tcccatatgt ggctctgtcc aagacataca atgtagacaa acatgtgcca
     5161 gacagtggag ccacagccac ggcctacctg tgcggggtca agggcaactt ccagaccatt
     5221 ggcttgagtg cagccgcccg ctttaaccag tgcaacacga cacgcggcaa cgaggtcatc
     5281 tccgtgatga atcgggccaa gaaagcaggg aagtcagtgg gagtggtaac caccacacga
     5341 gtgcagcacg cctcgccagc cggcacctac gcccacacgg tgaaccgcaa ctggtactcg
     5401 gacgccgacg tgcctgcctc ggcccgccag gaggggtgcc aggacatcgc tacgcagctc
     5461 atctccaaca tggacattga cgtgatccta ggtggaggcc gaaagtacat gtttcgcatg
     5521 ggaaccccag accctgagta cccagatgac tacagccaag gtgggaccag gctggacggg
     5581 aagaatctgg tgcaggaatg gctggcgaag cgccagggtg cccggtatgt gtggaaccgc
     5641 actgagctca tgcaggcttc cctggacccg tctgtgaccc atctcatggg tctctttgag
     5701 cctggagaca tgaaatacga gatccaccga gactccacac tggacccctc cctgatggag
     5761 atgacagagg ctgccctgcg cctgctgagc aggaaccccc gcggcttctt cctcttcgtg
     5821 gagggtggtc gcatcgacca tggtcatcat gaaagcaggg cttaccgggc actgactgag
     5881 acgatcatgt tcgacgacgc cattgagagg gcgggccagc tcaccagcga ggaggacacg
     5941 ctgagcctcg tcactgccga ccactcccac gtcttctcct tcggaggcta ccccctgcga
     6001 gggagctcca tcttcgggct ggcccctggc aaggcccggg acaggaaggc ctacacggtc
     6061 ctcctatacg gaaacggtcc aggctatgtg ctcaaggacg gcgcccggcc ggatgttacc
     6121 gagagcgaga gcgggagccc cgagtatcgg cagcagtcag cagtgcccct ggacgaagag
     6181 acccacgcag gcgaggacgt ggcggtgttc gcgcgcggcc cgcaggcgca cctggttcac
     6241 ggcgtgcagg agcagacctt catagcgcac gtcatggcct tcgccgcctg cctggagccc
     6301 tacaccgcct gcgacctggc gccccccgcc ggcaccaccg acgccgcgca cccgggtggc
     6361 ggaggactga acgacatctt cgaggctcag aaaatcgaat ggcacgaaca tcaccatcac
     6421 catcaccatc accattaagg ccggcctgta gtcactggca caacgcgtta cccggtaagc
     6481 caatcgggta tacacggtcg tcatactgca gacagggttc ttctactttg caagatagtc
     6541 ttgagtagta aaataaatag atagagaaaa tcagcctcga ctgtgccttc tagttgccag
     6601 ccatctgttg tttgcccctc ccccgtgcct tccttgaccc tggaaggtgc cactcccact
     6661 gtcctttcct aataaaatga ggaaattgca tcacaacact caaccctatc tcggtctatt
     6721 cttttgattt ataagggatt ttgccgattt cggcctattg gttaaaaaat gagctgattt
     6781 aacaaaaatt taacgcgaat taattctgtg gaatgtgtgt cagttagggt gtggaaagtc
     6841 cccaggctcc ccagcaggca gaagtatgca aagcatgcat ctcaattagt cagcaaccag
     6901 gtgtggaaag tccccaggct ccccagcagg cagaagtatg caaagcatgc atctcaatta
     6961 gtcagcaacc atagtcccgc ccctaactcc gcccatcccg cccctaactc cgcccagttc
     7021 cgcccattct ccgccccatg gctgactaat tttttttatt tatgcagagg ccgaggccgc
     7081 ctctgcctct gagctattcc agaagtagtg aggaggcttt tttggaggcc taggcttttg
     7141 caaaaagctc ccgggagctt gtatatccat tttcggatct gatcagcacg tgttgacaat
     7201 taatcatcgg catagtatat cggcatagta taatacgaca aggtgaggaa ctaaaccatg
     7261 accgagtaca agcccacggt gcgcctcgcc acccgcgacg acgtccccag ggccgtacgc
     7321 accctcgccg ccgcgttcgc cgactacccc gccacgcgcc acaccgtcga tccggaccgc
     7381 cacatcgagc gggtcaccga gctgcaagaa ctcttcctca cgcgcgtcgg gctcgacatc
     7441 ggcaaggtgt gggtcgcgga cgacggcgcc gcggtggcgg tctggaccac gccggagagc
     7501 gtcgaagcgg gggcggtgtt cgccgagatc ggcccgcgca tggccgagtt gagcggttcc
     7561 cggctggccg cgcagcaaca gatggaaggc ctcctggcgc cgcaccggcc caaggagccc
     7621 gcgtggttcc tggccaccgt cggcgtctcg cccgaccacc agggcaaggg tctgggcagc
     7681 gccgtcgtgc tccccggagt ggaggcggcc gagcgcgccg gggtgcccgc cttcctggag
     7741 acatccgcgc cccgcaacct ccccttctac gagcggctcg gcttcaccgt caccgccgac
     7801 gtcgaggtgc ccgaaggacc gcgcacctgg tgcatgaccc gcaagcccgg tgcctgacac
     7861 gtgctacgag atttcgattc caccgccgcc ttctatgaaa ggttgggctt cggaatcgtt
     7921 ttccgggacg ccggctggat gatcctccag cgcggggatc tcatgctgga gttcttcgcc
     7981 caccccaact tgtttattgc agcttataat ggttacaaat aaagcaatag catcacaaat
     8041 ttcacaaata aagcattttt ttcactgcat tctagttgtg gtttgtccaa actcatcaat
     8101 gtatcttatc atgtctgtat accgtcgacc tctagctaga gcttggcgta atcatggtca
     8161 ttaccaatgc ttaatcagtg aggcacctat ctcagcgatc tgtctatttc gttcatccat
     8221 agttgcctga ctccccgtcg tgtagataac tacgatacgg gagggcttac catctggccc
     8281 cagcgctgcg atgataccgc gagaaccacg ctcaccggct ccggatttat cagcaataaa
     8341 ccagccagcc ggaagggccg agcgcagaag tggtcctgca actttatccg cctccatcca
     8401 gtctattaat tgttgccggg aagctagagt aagtagttcg ccagttaata gtttgcgcaa
     8461 cgttgttgcc atcgctacag gcatcgtggt gtcacgctcg tcgtttggta tggcttcatt
     8521 cagctccggt tcccaacgat caaggcgagt tacatgatcc cccatgttgt gcaaaaaagc
     8581 ggttagctcc ttcggtcctc cgatcgttgt cagaagtaag ttggccgcag tgttatcact
     8641 catggttatg gcagcactgc ataattctct tactgtcatg ccatccgtaa gatgcttttc
     8701 tgtgactggt gagtactcaa ccaagtcatt ctgagaatag tgtatgcggc gaccgagttg
     8761 ctcttgcccg gcgtcaatac gggataatac cgcgccacat agcagaactt taaaagtgct
     8821 catcattgga aaacgttctt cggggcgaaa actctcaagg atcttaccgc tgttgagatc
     8881 cagttcgatg taacccactc gtgcacccaa ctgatcttca gcatctttta ctttcaccag
     8941 cgtttctggg tgagcaaaaa caggaaggca aaatgccgca aaaaagggaa taagggcgac
     9001 acggaaatgt tgaatactca tattcttcct t
//
