LOCUS       sequence-382985-        8359 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  Mammalian expression of secreted protein fused to 
            Fc(DAPA)-Avi-6xHis..
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 8359)
  AUTHORS   Wojtowicz WM, Vielmetter J, Fernandes RA, Siepe DH, Eastman CL, 
            Chisholm GB, Cox S, Klock H, Anderson PW, Rue SM, Miller JJ, Glaser 
            SM, Bragstad ML, Vance J, Lam AW, Lesley SA, Zinn K, Garcia KC
  TITLE     A Human IgSF Cell-Surface Interactome Reveals a Complex Network of 
            Protein-Protein Interactions.
  JOURNAL   Cell. 2020 Aug 20;182(4):1027-1043.e17. doi: 
            10.1016/j.cell.2020.07.025.
  PUBMED    32822567
REFERENCE   2  (bases 1 to 8359)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; doi: 
            "10.1016/j.cell.2020.07"; journalName: "Cell"; date: "2020-08-20- 
            20"; volume: "182"; issue: "4"; pages: "1027-1043.e17"
COMMENT     Sequence Label: pD649-HAsp-SEMA3A-Fc(DAPA)-AviTag-6xHis
FEATURES             Location/Qualifiers
     source          1..8359
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     124..143
                     /label=Kan-R
                     /note="Kanamycin resistance gene, reverse primer"
     primer_bind     149..168
                     /label=pENTR-R
                     /note="pENTR vectors, reverse primer"
     rep_origin      254..842
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     743..762
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     primer_bind     996..1013
                     /label=L4440
                     /note="L4440 vector, forward primer"
     primer_bind     1112..1128
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    1584..1600
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     enhancer        1767..2146
                     /label=CMV enhancer
                     /note="human cytomegalovirus immediate early enhancer"
     promoter        2147..2350
                     /label=CMV promoter
                     /note="human cytomegalovirus (CMV) immediate early 
                     promoter"
     primer_bind     2301..2321
                     /label=CMV-F
                     /note="Human CMV immediate early promoter, forward primer"
     primer_bind     2347..2371
                     /label=LNCX
                     /note="Human CMV promoter, forward primer"
     promoter        2581..2599
                     /label=SP6 promoter
                     /note="promoter for bacteriophage SP6 RNA polymerase"
     primer_bind     2581..2598
                     /label=SP6
                     /note="SP6 promoter, forward primer"
     primer_bind     2612..2631
                     /label=pMT2-F
                     /note="Synthetic intron, forward primer"
     CDS             5701..5745
                     /codon_start=1
                     /product="peptide tag that allows for enzymatic 
                     biotinylation"
                     /label=AviTag(TM)
                     /translation="GLNDIFEAQKIEWHE"
     CDS             5746..5763
                     /codon_start=1
                     /product="6xHis affinity tag"
                     /label=6xHis
                     /translation="HHHHHH"
     primer_bind     complement(5903..5920)
                     /label=BGH-rev
                     /note="Bovine growth hormone terminator, reverse primer. 
                     Also called BGH reverse"
     polyA_signal    5909..6020
                     /label=bGH poly(A) signal
                     /note="bovine growth hormone polyadenylation signal"
     primer_bind     complement(6138..6158)
                     /label=pBABE 3'
                     /note="SV40 enhancer, reverse primer for pBABE vectors"
     promoter        6143..6472
                     /label=SV40 promoter
                     /note="SV40 enhancer and early promoter"
     rep_origin      6323..6458
                     /label=SV40 ori
                     /note="SV40 origin of replication"
     primer_bind     6385..6404
                     /label=SV40pro-F
                     /note="SV40 promoter/origin, forward primer"
     promoter        6520..6567
                     /label=EM7 promoter
                     /note="synthetic bacterial promoter "
     CDS             6586..7185
                     /codon_start=1
                     /gene="pac from Streptomyces alboniger"
                     /product="puromycin N-acetyltransferase"
                     /label=PuroR
                     /note="confers resistance to puromycin"
                     /translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
                     VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
                     AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
                     APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
     primer_bind     complement(6586..6605)
                     /label=Puro-R
                     /note="Puromycin resistance gene, reverse primer. Also 
                     called puro-variant-R"
     primer_bind     7082..7102
                     /label=Puro-F
                     /note="Puromycin resistance gene, forward primer"
     polyA_signal    7315..7436
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     primer_bind     complement(7352..7371)
                     /label=SV40pA-R
                     /note="SV40 polyA, reverse primer"
     primer_bind     7406..7425
                     /label=EBV-rev
                     /note="SV40 polyA terminator, reverse primer"
     CDS             complement(join(7489..8280,8281..8349))
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     8112..8131
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     promoter        complement(join(8350..8359,1..82))
                     /gene="bla"
                     /label=AmpR promoter
ORIGIN
        1 tttcaatatt attgaagcat ttatcagggt tattgtctca tgagcggata catatttgaa
       61 tgtatttaga aaaataaaca aataggggtc agtgttacaa ccaattaacc aattctgaac
      121 attatcgcga gcccatttat acctgaatat ggctcataac accccttgct catgaccaaa
      181 atcccttaac gtgagttacg cgcgcgtcgt tccactgagc gtcagacccc gtagaaaaga
      241 tcaaaggatc ttcttgagat cctttttttc tgcgcgtaat ctgctgcttg caaacaaaaa
      301 aaccaccgct accagcggtg gtttgtttgc cggatcaaga gctaccaact ctttttccga
      361 aggtaactgg cttcagcaga gcgcagatac caaatactgt tcttctagtg tagccgtagt
      421 tagcccacca cttcaagaac tctgtagcac cgcctacata cctcgctctg ctaatcctgt
      481 taccagtggc tgctgccagt ggcgataagt cgtgtcttac cgggttggac tcaagacgat
      541 agttaccgga taaggcgcag cggtcgggct gaacgggggg ttcgtgcaca cagcccagct
      601 tggagcgaac gacctacacc gaactgagat acctacagcg tgagctatga gaaagcgcca
      661 cgcttcccga agggagaaag gcggacaggt atccggtaag cggcagggtc ggaacaggag
      721 agcgcacgag ggagcttcca gggggaaacg cctggtatct ttatagtcct gtcgggtttc
      781 gccacctctg acttgagcgt cgatttttgt gatgctcgtc aggggggcgg agcctatgga
      841 aaaacgccag caacgcggcc tttttacggt tcctggcctt ttgctggcct tttgctcaca
      901 tgttctttcc tgcgttatcc cctgattctg tggataaccg tattaccgcc tttgagtgag
      961 ctgataccgc tcgccgcagc cgaacgaccg agcgcagcga gtcagtgagc gaggaagcgg
     1021 aaggcgagag tagggaactg ccaggcatca aactaagcag aaggcccctg acggatggcc
     1081 tttttgcgtt tctacaaact ctttctgtgt tgtaaaacga cggccagtct taagctcggg
     1141 ccccctgggc ggttctgata acgagtaatc gttaatccgc aaataacgta aaaacccgct
     1201 tcggcgggtt tttttatggg gggagtttag ggaaagagca tttgtcagaa tatttaaggg
     1261 cgcctgtcac tttgcttgat atatgagaat tatttaacct tataaatgag aaaaaagcaa
     1321 cgcactttaa ataagatacg ttgctttttc gattgatgaa cacctataat taaactattc
     1381 atctattatt tatgattttt tgtatataca atatttctag tttgttaaag agaattaaga
     1441 aaataaatct cgaaaataat aaagggaaaa tcagtttttg atatcaaaat tatacatgtc
     1501 aacgataata caaaatataa tacaaactat aagatgttat cagtatttat tatcatttag
     1561 aataaatttt gtgtcgccct taattgtgag cggataacaa ttacgagctt catgcacagt
     1621 ggcgttgact caatattggc cattagccat attattcatt ggttatatag cataaatcaa
     1681 tattggctat tggccattgc atacgttgta tctatatcat aatatgtaca tttatattgg
     1741 ctcatgtcca atatgaccgc catgttggca ttgattattg actagttatt aatagtaatc
     1801 aattacgggg tcattagttc atagcccata tatggagttc cgcgttacat aacttacggt
     1861 aaatggcccg cctggctgac cgcccaacga cccccgccca ttgacgtcaa taatgacgta
     1921 tgttcccata gtaacgccaa tagggacttt ccattgacgt caatgggtgg agtatttacg
     1981 gtaaactgcc cacttggcag tacatcaagt gtatcatatg ccaagtacgc cccctattga
     2041 cgtcaatgac ggtaaatggc ccgcctggca ttatgcccag tacatgacct tatgggactt
     2101 tcctacttgg cagtacatct acgtattagt catcgctatt accatggtga tgcggttttg
     2161 gcagtacatc aatgggcgtg gatagcggtt tgactcacgg ggatttccaa gtctccaccc
     2221 cattgacgtc aatgggagtt tgttttggca ccaaaatcaa cgggactttc caaaatgtcg
     2281 taacaactcc gccccattga cgcaaatggg cggtaggcgt gtacggtggg aggtctatat
     2341 aagcagagct cgtttagtga accgtcagat cgcctggaga cgccatccac gctgttttga
     2401 cctccataga agacaccggg accgatccag cctccgcggc cgggaacggt gcattggaac
     2461 gcggattccc cgtgccaaga gtgacgtaag taccgcctat agagtctata ggcccacccc
     2521 cttggcttcg ttagaacgcg gctacaatta atacataacc ttatgtatca tacacatacg
     2581 atttaggtga cactatagaa taacatccac tttgcctttc tctccacagg tgtccactcc
     2641 caggtccaac tgcacctcgg ttctatcgaa aacgcgcctg ctagcgccac catgaagacc
     2701 atcattgccc tgagctacat cttctgcctg gtgttcgctg cggccgccaa ttaccagaac
     2761 ggcaagaaca acgtgccccg gctgaagctg agctacaaag agatgctgga aagcaacaac
     2821 gtgatcacct tcaacggcct ggccaacagc agcagctacc acacctttct gctggacgag
     2881 gaacggtcca gactgtacgt gggagccaag gaccacatct tcagcttcga cctggtcaac
     2941 atcaaggact tccagaaaat cgtgtggccc gtgtcctaca ccagacggga tgagtgtaaa
     3001 tgggccggca aggacatcct gaaagagtgc gccaacttca tcaaggtgct gaaggcctac
     3061 aatcagaccc acctgtacgc ctgtggcacc ggcgcttttc accctatctg cacctacatc
     3121 gagatcggcc accatcctga ggacaatatc ttcaagctgg aaaacagcca cttcgagaac
     3181 ggcagaggca agagccccta cgatcctaag ctgctgacag ccagcctgct gatcgatggc
     3241 gagctgtatt ctggcacagc cgccgacttc atgggcagag acttcgccat cttcagaacc
     3301 ctgggccacc accatccaat cagaaccgag cagcacgaca gccggtggct gaacgaccct
     3361 aagtttatca gcgcccacct gatcagcgag agcgacaacc ccgaggacga caaggtgtac
     3421 ttcttcttcc gggaaaacgc catcgacggc gagcactctg gaaaagccac acacgccaga
     3481 atcggccaga tctgcaagaa cgacttcggc ggccacagat ccctcgtgaa caagtggacc
     3541 accttcctga aggcccggct gatctgttct gtgcccggac ctaatggcat cgacacccac
     3601 ttcgacgagc tgcaggacgt gttcctgatg aacttcaagg accccaagaa tcccgtggtg
     3661 tacggcgtgt tcaccaccag cagcaacatc ttcaagggca gcgccgtgtg catgtacagc
     3721 atgtccgatg tgcggagagt gtttctgggc ccctacgctc acagagatgg ccccaattat
     3781 cagtgggtgc cctaccaggg cagagtgccc tatcctagac ctggcacctg tcctagcaag
     3841 acctttggcg gcttcgacag caccaaggac ctgcctgacg atgtgattac cttcgccaga
     3901 tctcaccccg ccatgtacaa ccctgtgttc cccatgaaca acaggcccat cgtgatcaag
     3961 accgacgtga actaccagtt cacccagatc gtggtggaca gagtggatgc cgaggacggc
     4021 cagtacgacg tgatgttcat cggcaccgat gtgggcaccg tgctgaaagt ggtgtctatc
     4081 cccaaagaga cttggtacga cctggaagag gtgctgctgg aagagatgac cgtgttcaga
     4141 gagcccacag ccatcagcgc catggaactg agcacaaaac agcaacagct gtacatcggc
     4201 agcacagccg gcgttgcaca actgcctctg cacagatgcg acatctacgg caaagcctgc
     4261 gccgagtgtt gcctggccag agatccttac tgtgcctggg atggcagcgc ctgcagcaga
     4321 tactttccta ccgccaagcg gcggaccaga cggcaggata tcagaaacgg cgaccctctg
     4381 acacactgca gcgacctgca ccacgacaat caccacggac acagccccga ggaaagaatc
     4441 atctacgggg tcgagaactc cagcacattc ctggaatgca gccccaagag ccagcgcgct
     4501 ctggtgtatt ggcagttcca gaggcgcaat gaggaacgga aagaggaaat ccgggtcgac
     4561 gaccacatca tccggacaga tcagggcctg ctgctgagaa gcctgcaaca gaaggacagc
     4621 ggcaactacc tgtgccacgc cgtggaacac ggcttcatcc agacactgct caaagtgacc
     4681 ctggaagtga tcgacaccga gcacctcgag gaactgctgc acaaggacga tgatggcgac
     4741 ggcagcaaga ccaaagaaat gagcaacagc atgacgccct ctcagaaagt ctggtacagg
     4801 gacttcatgc agctgatcaa tcaccccaac ctgaacacca tggacgagtt ctgcgagcaa
     4861 gtgtggaagc gggacagaaa gcagcggaga cagaggcctg gacacacccc tggcaatagc
     4921 aacaaatgga agcacctcca agagaacaag aaaggccgga acagacggac ccacgagttt
     4981 gagagggccc ctagatctgt tggcgcgccg ggcggcgaca agacccacac ctgccccccc
     5041 tgcccagctc cagaactgct gggagggcct tccgtgttcc tgttcccccc caagcccaag
     5101 gacaccctga tgatcagcag gacccccgag gtgacctgcg tggtggtggc cgtgtcccac
     5161 gaggacccag aggtgaagtt caactggtac gtggacggcg tggaggtgca caacgccaag
     5221 accaagccca gagaggagca gtacaacagc acctacaggg tggtgtccgt gctgaccgtg
     5281 ctgcaccagg actggctgaa cggcaaagaa tacaagtgca aagtctccaa caaggccctg
     5341 gctgccccaa tcgaaaagac aatcagcaag gccaagggcc agccacggga gccccaggtg
     5401 tacaccctgc cccccagccg ggaggagatg accaagaacc aggtgtccct gacctgtctg
     5461 gtgaagggct tctaccccag cgatatcgcc gtggagtggg agagcaacgg ccagcccgag
     5521 aacaactaca agaccacccc cccagtgctg gacagcgacg gcagcttctt cctgtacagc
     5581 aagctgaccg tggacaagtc caggtggcag cagggcaacg tgttcagctg cagcgtgatg
     5641 cacgaggccc tgcacaacca ctacacccag aagtccctga gcctgagccc cggcggcagc
     5701 ggtcttaatg atattttcga ggctcagaag attgagtggc atgaacacca ccaccatcac
     5761 cactaaggcc ggcctgtagt cactggcaca acgcgttacc cggtaagcca atcgggtata
     5821 cacggtcgtc atactgcaga cagggttctt ctactttgca agatagtctt gagtagtaaa
     5881 ataaatagat agagaaaatc agcctcgact gtgccttcta gttgccagcc atctgttgtt
     5941 tgcccctccc ccgtgccttc cttgaccctg gaaggtgcca ctcccactgt cctttcctaa
     6001 taaaatgagg aaattgcatc acaacactca accctatctc ggtctattct tttgatttat
     6061 aagggatttt gccgatttcg gcctattggt taaaaaatga gctgatttaa caaaaattta
     6121 acgcgaatta attctgtgga atgtgtgtca gttagggtgt ggaaagtccc caggctcccc
     6181 agcaggcaga agtatgcaaa gcatgcatct caattagtca gcaaccaggt gtggaaagtc
     6241 cccaggctcc ccagcaggca gaagtatgca aagcatgcat ctcaattagt cagcaaccat
     6301 agtcccgccc ctaactccgc ccatcccgcc cctaactccg cccagttccg cccattctcc
     6361 gccccatggc tgactaattt tttttattta tgcagaggcc gaggccgcct ctgcctctga
     6421 gctattccag aagtagtgag gaggcttttt tggaggccta ggcttttgca aaaagctccc
     6481 gggagcttgt atatccattt tcggatctga tcagcacgtg ttgacaatta atcatcggca
     6541 tagtatatcg gcatagtata atacgacaag gtgaggaact aaaccatgac cgagtacaag
     6601 cccacggtgc gcctcgccac ccgcgacgac gtccccaggg ccgtacgcac cctcgccgcc
     6661 gcgttcgccg actaccccgc cacgcgccac accgtcgatc cggaccgcca catcgagcgg
     6721 gtcaccgagc tgcaagaact cttcctcacg cgcgtcgggc tcgacatcgg caaggtgtgg
     6781 gtcgcggacg acggcgccgc ggtggcggtc tggaccacgc cggagagcgt cgaagcgggg
     6841 gcggtgttcg ccgagatcgg cccgcgcatg gccgagttga gcggttcccg gctggccgcg
     6901 cagcaacaga tggaaggcct cctggcgccg caccggccca aggagcccgc gtggttcctg
     6961 gccaccgtcg gcgtctcgcc cgaccaccag ggcaagggtc tgggcagcgc cgtcgtgctc
     7021 cccggagtgg aggcggccga gcgcgccggg gtgcccgcct tcctggagac atccgcgccc
     7081 cgcaacctcc ccttctacga gcggctcggc ttcaccgtca ccgccgacgt cgaggtgccc
     7141 gaaggaccgc gcacctggtg catgacccgc aagcccggtg cctgacacgt gctacgagat
     7201 ttcgattcca ccgccgcctt ctatgaaagg ttgggcttcg gaatcgtttt ccgggacgcc
     7261 ggctggatga tcctccagcg cggggatctc atgctggagt tcttcgccca ccccaacttg
     7321 tttattgcag cttataatgg ttacaaataa agcaatagca tcacaaattt cacaaataaa
     7381 gcattttttt cactgcattc tagttgtggt ttgtccaaac tcatcaatgt atcttatcat
     7441 gtctgtatac cgtcgacctc tagctagagc ttggcgtaat catggtcatt accaatgctt
     7501 aatcagtgag gcacctatct cagcgatctg tctatttcgt tcatccatag ttgcctgact
     7561 ccccgtcgtg tagataacta cgatacggga gggcttacca tctggcccca gcgctgcgat
     7621 gataccgcga gaaccacgct caccggctcc ggatttatca gcaataaacc agccagccgg
     7681 aagggccgag cgcagaagtg gtcctgcaac tttatccgcc tccatccagt ctattaattg
     7741 ttgccgggaa gctagagtaa gtagttcgcc agttaatagt ttgcgcaacg ttgttgccat
     7801 cgctacaggc atcgtggtgt cacgctcgtc gtttggtatg gcttcattca gctccggttc
     7861 ccaacgatca aggcgagtta catgatcccc catgttgtgc aaaaaagcgg ttagctcctt
     7921 cggtcctccg atcgttgtca gaagtaagtt ggccgcagtg ttatcactca tggttatggc
     7981 agcactgcat aattctctta ctgtcatgcc atccgtaaga tgcttttctg tgactggtga
     8041 gtactcaacc aagtcattct gagaatagtg tatgcggcga ccgagttgct cttgcccggc
     8101 gtcaatacgg gataataccg cgccacatag cagaacttta aaagtgctca tcattggaaa
     8161 acgttcttcg gggcgaaaac tctcaaggat cttaccgctg ttgagatcca gttcgatgta
     8221 acccactcgt gcacccaact gatcttcagc atcttttact ttcaccagcg tttctgggtg
     8281 agcaaaaaca ggaaggcaaa atgccgcaaa aaagggaata agggcgacac ggaaatgttg
     8341 aatactcata ttcttcctt
//
