LOCUS       sequence-394659-        4671 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  Contains CPK5 promoter.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4671)
  AUTHORS   Calabria J, Wang L, Rast-Somssich MI, Chen HW, Watt M, Persson S, 
            Andersen TG, Idnurm A, Somssich M
  TITLE     Resolving spatially distinct phytohormone response zones in 
            Arabidopsis thaliana roots colonized by Fusarium oxysporum.
  JOURNAL   J Exp Bot. 2025 Jan 17:erae516. doi: 10.1093/jxb/erae516.
  PUBMED    39823275
REFERENCE   2  (bases 1 to 4671)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "J Exp Bot. 
            2025 Jan 17:erae516. doi: 10.1093/jxb/erae516."
COMMENT     Sequence Label: pGG-PIP27
FEATURES             Location/Qualifiers
     source          1..4671
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     complement(10..28)
                     /label=pBRforEco
                     /note="pBR322 vectors, upsteam of EcoRI site, forward 
                     primer"
     promoter        96..200
                     /gene="bla"
                     /label=AmpR promoter
     CDS             join(201..269,270..1061)
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     complement(419..438)
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     rep_origin      1232..1820
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     1721..1740
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     primer_bind     1974..1991
                     /label=L4440
                     /note="L4440 vector, forward primer"
     protein_bind    2108..2129
                     /label=CAP binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding activates transcription in the presence 
                     of cAMP."
     promoter        join(2144..2149,2150..2167,2168..2174)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    2182..2198
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        2212..2230
                     /label=SP6 promoter
                     /note="promoter for bacteriophage SP6 RNA polymerase"
     primer_bind     2212..2229
                     /label=SP6
                     /note="SP6 promoter, forward primer"
     primer_bind     complement(4257..4276)
                     /label=T7
                     /note="T7 promoter, forward primer"
     promoter        complement(4258..4276)
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     primer_bind     complement(4286..4308)
                     /label=M13/pUC Forward
                     /note="In lacZ gene"
     primer_bind     complement(4502..4521)
                     /label=pRS-marker
                     /note="pRS vectors, use to sequence yeast selectable 
                     marker"
     primer_bind     4621..4643
                     /label=pGEX 3'
                     /note="pGEX vectors, reverse primer"
ORIGIN
        1 gacgaaaggg cctcgtgata cgcctatttt tataggttaa tgtcatgata ataatggttt
       61 cttagacgtc aggtggcact tttcggggaa atgtgcgcgg aacccctatt tgtttatttt
      121 tctaaataca ttcaaatatg tatccgctca tgagacaata accctgataa atgcttcaat
      181 aatattgaaa aaggaagagt atgagtattc aacatttccg tgtcgccctt attccctttt
      241 ttgcggcatt ttgccttcct gtttttgctc acccagaaac gctggtgaaa gtaaaagatg
      301 ctgaagatca gttgggtgca cgagtgggtt acatcgaact ggatctcaac agcggtaaga
      361 tccttgagag ttttcgcccc gaagaacgtt ttccaatgat gagcactttt aaagttctgc
      421 tatgtggcgc ggtattatcc cgtattgacg ccgggcaaga gcaactcggt cgccgcatac
      481 actattctca gaatgacttg gttgagtact caccagtcac agaaaagcat cttacggatg
      541 gcatgacagt aagagaatta tgcagtgctg ccataaccat gagtgataac actgcggcca
      601 acttacttct gacaacgatc ggaggaccga aggagctaac cgcttttttg cacaacatgg
      661 gggatcatgt aactcgcctt gatcgttggg aaccggagct gaatgaagcc ataccaaacg
      721 acgagcgtga caccacgatg cctgtagcaa tggcaacaac gttgcgcaaa ctattaactg
      781 gcgaactact tactctagct tcccggcaac aattaataga ctggatggag gcggataaag
      841 ttgcaggacc acttctgcgc tcggcccttc cggctggctg gtttattgct gataaatctg
      901 gagccggtga gcgtggctct cgaggtatca ttgcagcact ggggccagat ggtaagccct
      961 cccgtatcgt agttatctac acgacgggga gtcaggcaac tatggatgaa cgaaatagac
     1021 agatcgctga gataggtgcc tcactgatta agcattggta actgtcagac caagtttact
     1081 catatatact ttagattgat ttaaaacttc atttttaatt taaaaggatc taggtgaaga
     1141 tcctttttga taatctcatg accaaaatcc cttaacgtga gttttcgttc cactgagcgt
     1201 cagaccccgt agaaaagatc aaaggatctt cttgagatcc tttttttctg cgcgtaatct
     1261 gctgcttgca aacaaaaaaa ccaccgctac cagcggtggt ttgtttgccg gatcaagagc
     1321 taccaactct ttttccgaag gtaactggct tcagcagagc gcagatacca aatactgttc
     1381 ttctagtgta gccgtagtta ggccaccact tcaagaactc tgtagcaccg cctacatacc
     1441 tcgctctgct aatcctgtta ccagtggctg ctgccagtgg cgataagtcg tgtcttaccg
     1501 ggttggactc aagacgatag ttaccggata aggcgcagcg gtcgggctga acggggggtt
     1561 cgtgcacaca gcccagcttg gagcgaacga cctacaccga actgagatac ctacagcgtg
     1621 agctatgaga aagcgccacg cttcccgaag ggagaaaggc ggacaggtat ccggtaagcg
     1681 gcagggtcgg aacaggagag cgcacgaggg agcttccagg gggaaacgcc tggtatcttt
     1741 atagtcctgt cgggtttcgc cacctctgac ttgagcgtcg atttttgtga tgctcgtcag
     1801 gggggcggag cctatggaaa aacgccagca acgcggcctt tttacggttc ctggcctttt
     1861 gctggccttt tgctcacatg ttctttcctg cgttatcccc tgattctgtg gataaccgta
     1921 ttaccgcctt tgagtgagct gataccgctc gccgcagccg aacgaccgag cgcagcgagt
     1981 cagtgagcga ggaagcggaa gagcgcccaa tacgcaaacc gcctctcccc gcgcgttggc
     2041 cgattcatta atgcagctgg cacgacaggt ttcccgactg gaaagcgggc agtgagcgca
     2101 acgcaattaa tgtgagttag ctcactcatt aggcacccca ggctttacac tttatgcttc
     2161 cggctcgtat gttgtgtgga attgtgagcg gataacaatt tcacacgagc tatttaggtg
     2221 acactataga agtgaagctt ggtctcaacc taccatgtga ctacgacaac tactggtttt
     2281 ctgaaaataa atatctatcg tccgtatatc aaaacttgat atgtataaaa caaaagatat
     2341 attgttaaac gtcgttgtta aagttcgtat atttgaccgc aaagattacc ataaatgtat
     2401 ttagaacata ggaaaaacat ctaattggtt aataaatatt tatgactcca tatttcttag
     2461 atattttccg gaaatgaacg tagtacaagc gttatgtttg gaactacagt acacaccaca
     2521 gaatataaac acgcaataga atcttttttc atagactttg aaagttatgg catgtgaatg
     2581 cgaatatata aagattcttg tccacatcct caattaatca tcatcattgc ttcttaaaaa
     2641 ttccgtagaa tgaggagaaa cgtaccattt atgtttactg gtagtagtga ttactgattt
     2701 aagatattat tcttgggaaa gaaacatcta gtaacaacat tttgaaaaga aaaaaatcag
     2761 aatgattatt acggaaaaat gaaaaattca ataacgttat gtttgtcacc aaactaatgt
     2821 taaaacgaat tcaaaccaag ttggagagat gttacaggac agttttgcta aaaaaaatca
     2881 gccagcacat tgatacaaaa cccaaaatat aattttgctt gtgtacgtgg aggtgtcaaa
     2941 tttgattcag tcttgtgaaa atgtcaattt gatagcgttt ataattaaaa ttttcggttc
     3001 ttttttttat ctggaattga aatgtgtaat atgttatcat tttaggcctt attgtaaggt
     3061 ctaaagtcta aaacaataca ataatacggc ctttggggtg tctgaatttt gtatttgaac
     3121 attgggctgg atcagtgaat aaacaaggcc caaaagtaaa acttattagg gattatgtgc
     3181 ggggctccag aaagttgcaa tatatggaaa agtcaatctc ttacgtcata atagtcagtg
     3241 acgccataat actgtttaaa tatttggcat atctttatct taagaaaaaa tctcaagaga
     3301 ttactattct ttctgatagg agattgaatg aacggttgct tcttttacaa gtagatcaca
     3361 tgtatttaaa ttagtcttct catacgacga gaataaaacc atcgtgctta atacttaaat
     3421 ttttttacaa ttaacggtaa ctagtaaaac cagaaatgca ttttgatttt gtacaaacca
     3481 acattctaat tttagttttt tttttcaatt acaatttaaa cgataaacaa aagagaaact
     3541 ggtttaaatt taataatgca aaagcagaag aaagaaggtg agaggaaaca gcggagagag
     3601 acagagtcag agaggtgtag aagtagtagc tggtgagcac taataaaaga cctttcttcg
     3661 ctcaatcgcc gccgtaaaat aaaacaccat cacattctca tccaacgaat ctaatctatc
     3721 cgaccaaacc aaagctctta aaaaatctat ttttattctt acttcaatct ctgaaataaa
     3781 taaacataaa atattgtagc tttcctttgt tgttcgactt ttctcttttg tctcccctaa
     3841 atttagtttc tccttttaag tcagattcct tcctaatccc attctttcag tcttctcttt
     3901 cgcccttctg agttcaacaa ctggtaacta gatcctcttt ttgctttact tcattctctg
     3961 ttttgttatt cctttaaaag atccatcgaa acttcttagc tctttgtctt ttttttggtt
     4021 attttgactc tttgatctga tgtgggtttt gcgtctttct ttacttgtgg tattgttaaa
     4081 gttcgttact ttgttctcgt ttagcttctt gtatttggtc taatttaagt cttttgactt
     4141 ttgacagtgt tatctctatg aacagttcct ttgatgaaga acacaaagtg aaagttgctg
     4201 tctttataac caggatttgg taattcccat tgtttcaaca tgagaccgaa ttctcgccct
     4261 atagtgagtc gtattacctg gccgtcgttt tacaacgtcg tgactgggaa aaccctggcg
     4321 ttacccaact taatcgcctt gcagcacatc cccctttcgc cagctggcgt aatagcgaag
     4381 aggcccgcac cgatcgccct tcccaacagt tgcgcagcct gaatggcgaa tggcgcctga
     4441 tgcggtattt tctccttacg catctgtgcg gtatttcaca ccgcatatgg tgcactctca
     4501 gtacaatctg ctctgatgcc gcatagttaa gccagccccg acacccgcca acacccgctg
     4561 acgcgccctg acgggcttgt ctgctcccgg catccgctta cagacaagct gtgaccgtct
     4621 ccgggagctg catgtgtcag aggttttcac cgtcatcacc gaaacgcgcg a
//
