LOCUS       sequence-413703-        9689 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  expression of human Replication Protein A in E. coli.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 9689)
  AUTHORS   Henricksen LA, Umbricht CB, Wold MS
  TITLE     Recombinant replication protein A: expression, complex formation, 
            and functional characterization.
  JOURNAL   J Biol Chem. 1994 Apr 15;269(15):11121-32.
  PUBMED    8157639
REFERENCE   2  (bases 1 to 9689)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "J Biol 
            Chem."; date: "1994-04-15"; volume: "269(15)"; pages: "11121-32"
COMMENT     Sequence Label: p11d-tRPA (MSW#111)
FEATURES             Location/Qualifiers
     source          1..9689
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     complement(18..36)
                     /label=pBRforEco
                     /note="pBR322 vectors, upsteam of EcoRI site, forward 
                     primer"
     promoter        104..208
                     /gene="bla"
                     /label=AmpR promoter
     CDS             join(209..277,278..1069)
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     complement(427..446)
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     rep_origin      1240..1828
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     1729..1748
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     primer_bind     1982..1999
                     /label=L4440
                     /note="L4440 vector, forward primer"
     misc_feature    2014..2156
                     /label=bom
                     /note="basis of mobility region from pBR322"
     primer_bind     complement(2082..2101)
                     /label=pRS-marker
                     /note="pRS vectors, use to sequence yeast selectable 
                     marker"
     primer_bind     2242..2264
                     /label=pGEX 3'
                     /note="pGEX vectors, reverse primer"
     CDS             complement(2258..2449)
                     /codon_start=1
                     /gene="rop"
                     /product="Rop protein, which maintains plasmids at low copy
                     number"
                     /label=rop
                     /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHA
                     DELYRSCLARFGDDGENL"
     CDS             complement(3761..4843)
                     /codon_start=1
                     /gene="lacI"
                     /product="lac repressor"
                     /label=lacI
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
                     /translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
                     NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
                     EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
                     EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
                     MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
                     YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
                     ALADSLMQLARQVSRLESGQ"
     primer_bind     4805..4824
                     /label=LacI-R
                     /note="LacI, reverse primer"
     promoter        complement(4844..4921)
                     /gene="lacI"
                     /label=lacI promoter
     primer_bind     5127..5146
                     /label=pBRrevBam
                     /note="pBR322 vectors, tet region, downstream of BamHI, 
                     reverse primer"
     primer_bind     5230..5249
                     /label=T7
                     /note="T7 promoter, forward primer"
     promoter        5230..5248
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     protein_bind    5249..5273
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     RBS             5288..5310
                     /note="efficient ribosome binding site from bacteriophage 
                     T7 gene 10 (Olins and Rangwala, 1989)"
     RBS             7677..7699
                     /note="efficient ribosome binding site from bacteriophage 
                     T7 gene 10 (Olins and Rangwala, 1989)"
     RBS             8407..8429
                     /note="efficient ribosome binding site from bacteriophage 
                     T7 gene 10 (Olins and Rangwala, 1989)"
     primer_bind     complement(9416..9434)
                     /label=T7 Term
                     /note="T7 terminator, reverse primer"
     terminator      9430..9477
                     /label=T7 terminator
                     /note="transcription terminator for bacteriophage T7 RNA 
                     polymerase"
     promoter        complement(join(9652..9657,9658..9674,9675..9680))
                     /label=tet promoter
                     /note="E. coli promoter for tetracycline efflux protein 
                     gene"
ORIGIN
        1 ttcttgaaga cgaaagggcc tcgtgatacg cctattttta taggttaatg tcatgataat
       61 aatggtttct tagacgtcag gtggcacttt tcggggaaat gtgcgcggaa cccctatttg
      121 tttatttttc taaatacatt caaatatgta tccgctcatg agacaataac cctgataaat
      181 gcttcaataa tattgaaaaa ggaagagtat gagtattcaa catttccgtg tcgcccttat
      241 tccctttttt gcggcatttt gccttcctgt ttttgctcac ccagaaacgc tggtgaaagt
      301 aaaagatgct gaagatcagt tgggtgcacg agtgggttac atcgaactgg atctcaacag
      361 cggtaagatc cttgagagtt ttcgccccga agaacgtttt ccaatgatga gcacttttaa
      421 agttctgcta tgtggcgcgg tattatcccg tgttgacgcc gggcaagagc aactcggtcg
      481 ccgcatacac tattctcaga atgacttggt tgagtactca ccagtcacag aaaagcatct
      541 tacggatggc atgacagtaa gagaattatg cagtgctgcc ataaccatga gtgataacac
      601 tgcggccaac ttacttctga caacgatcgg aggaccgaag gagctaaccg cttttttgca
      661 caacatgggg gatcatgtaa ctcgccttga tcgttgggaa ccggagctga atgaagccat
      721 accaaacgac gagcgtgaca ccacgatgcc tgcagcaatg gcaacaacgt tgcgcaaact
      781 attaactggc gaactactta ctctagcttc ccggcaacaa ttaatagact ggatggaggc
      841 ggataaagtt gcaggaccac ttctgcgctc ggcccttccg gctggctggt ttattgctga
      901 taaatctgga gccggtgagc gtgggtctcg cggtatcatt gcagcactgg ggccagatgg
      961 taagccctcc cgtatcgtag ttatctacac gacggggagt caggcaacta tggatgaacg
     1021 aaatagacag atcgctgaga taggtgcctc actgattaag cattggtaac tgtcagacca
     1081 agtttactca tatatacttt agattgattt aaaacttcat ttttaattta aaaggatcta
     1141 ggtgaagatc ctttttgata atctcatgac caaaatccct taacgtgagt tttcgttcca
     1201 ctgagcgtca gaccccgtag aaaagatcaa aggatcttct tgagatcctt tttttctgcg
     1261 cgtaatctgc tgcttgcaaa caaaaaaacc accgctacca gcggtggttt gtttgccgga
     1321 tcaagagcta ccaactcttt ttccgaaggt aactggcttc agcagagcgc agataccaaa
     1381 tactgtcctt ctagtgtagc cgtagttagg ccaccacttc aagaactctg tagcaccgcc
     1441 tacatacctc gctctgctaa tcctgttacc agtggctgct gccagtggcg ataagtcgtg
     1501 tcttaccggg ttggactcaa gacgatagtt accggataag gcgcagcggt cgggctgaac
     1561 ggggggttcg tgcacacagc ccagcttgga gcgaacgacc tacaccgaac tgagatacct
     1621 acagcgtgag ctatgagaaa gcgccacgct tcccgaaggg agaaaggcgg acaggtatcc
     1681 ggtaagcggc agggtcggaa caggagagcg cacgagggag cttccagggg gaaacgcctg
     1741 gtatctttat agtcctgtcg ggtttcgcca cctctgactt gagcgtcgat ttttgtgatg
     1801 ctcgtcaggg gggcggagcc tatggaaaaa cgccagcaac gcggcctttt tacggttcct
     1861 ggccttttgc tggccttttg ctcacatgtt ctttcctgcg ttatcccctg attctgtgga
     1921 taaccgtatt accgcctttg agtgagctga taccgctcgc cgcagccgaa cgaccgagcg
     1981 cagcgagtca gtgagcgagg aagcggaaga gcgcctgatg cggtattttc tccttacgca
     2041 tctgtgcggt atttcacacc gcatatatgg tgcactctca gtacaatctg ctctgatgcc
     2101 gcatagttaa gccagtatac actccgctat cgctacgtga ctgggtcatg gctgcgcccc
     2161 gacacccgcc aacacccgct gacgcgccct gacgggcttg tctgctcccg gcatccgctt
     2221 acagacaagc tgtgaccgtc tccgggagct gcatgtgtca gaggttttca ccgtcatcac
     2281 cgaaacgcgc gaggcagctg cggtaaagct catcagcgtg gtcgtgaagc gattcacaga
     2341 tgtctgcctg ttcatccgcg tccagctcgt tgagtttctc cagaagcgtt aatgtctggc
     2401 ttctgataaa gcgggccatg ttaagggcgg ttttttcctg tttggtcact gatgcctccg
     2461 tgtaaggggg atttctgttc atgggggtaa tgataccgat gaaacgagag aggatgctca
     2521 cgatacgggt tactgatgat gaacatgccc ggttactgga acgttgtgag ggtaaacaac
     2581 tggcggtatg gatgcggcgg gaccagagaa aaatcactca gggtcaatgc cagcgcttcg
     2641 ttaatacaga tgtaggtgtt ccacagggta gccagcagca tcctgcgatg cagatccgga
     2701 acataatggt gcagggcgct gacttccgcg tttccagact ttacgaaaca cggaaaccga
     2761 agaccattca tgttgttgct caggtcgcag acgttttgca gcagcagtcg cttcacgttc
     2821 gctcgcgtat cggtgattca ttctgctaac cagtaaggca accccgccag cctagccggg
     2881 tcctcaacga caggagcacg atcatgcgca cccgtggcca ggacccaacg ctgcccgaga
     2941 tgcgccgcgt gcggctgctg gagatggcgg acgcgatgga tatgttctgc caagggttgg
     3001 tttgcgcatt cacagttctc cgcaagaatt gattggctcc aattcttgga gtggtgaatc
     3061 cgttagcgag gtgccgccgg cttccattca ggtcgaggtg gcccggctcc atgcaccgcg
     3121 acgcaacgcg gggaggcaga caaggtatag ggcggcgcct acaatccatg ccaacccgtt
     3181 ccatgtgctc gccgaggcgg cataaatcgc cgtgacgatc agcggtccag tgatcgaagt
     3241 taggctggta agagccgcga gcgatccttg aagctgtccc tgatggtcgt catctacctg
     3301 cctggacagc atggcctgca acgcgggcat cccgatgccg ccggaagcga gaagaatcat
     3361 aatggggaag gccatccagc ctcgcgtcgc gaacgccagc aagacgtagc ccagcgcgtc
     3421 ggccgccatg ccggcgataa tggcctgctt ctcgccgaaa cgtttggtgg cgggaccagt
     3481 gacgaaggct tgagcgaggg cgtgcaagat tccgaatacc gcaagcgaca ggccgatcat
     3541 cgtcgcgctc cagcgaaagc ggtcctcgcc gaaaatgacc cagagcgctg ccggcacctg
     3601 tcctacgagt tgcatgataa agaagacagt cataagtgcg gcgacgatag tcatgccccg
     3661 cgcccaccgg aaggagctga ctgggttgaa ggctctcaag ggcatcggtc gagatcccgg
     3721 tgcctaatga gtgagctaac ttacattaat tgcgttgcgc tcactgcccg ctttccagtc
     3781 gggaaacctg tcgtgccagc tgcattaatg aatcggccaa cgcgcgggga gaggcggttt
     3841 gcgtattggg cgccagggtg gtttttcttt tcaccagtga gacgggcaac agctgattgc
     3901 ccttcaccgc ctggccctga gagagttgca gcaagcggtc cacgctggtt tgccccagca
     3961 ggcgaaaatc ctgtttgatg gtggttaacg gcgggatata acatgagctg tcttcggtat
     4021 cgtcgtatcc cactaccgag atatccgcac caacgcgcag cccggactcg gtaatggcgc
     4081 gcattgcgcc cagcgccatc tgatcgttgg caaccagcat cgcagtggga acgatgccct
     4141 cattcagcat ttgcatggtt tgttgaaaac cggacatggc actccagtcg ccttcccgtt
     4201 ccgctatcgg ctgaatttga ttgcgagtga gatatttatg ccagccagcc agacgcagac
     4261 gcgccgagac agaacttaat gggcccgcta acagcgcgat ttgctggtga cccaatgcga
     4321 ccagatgctc cacgcccagt cgcgtaccgt cttcatggga gaaaataata ctgttgatgg
     4381 gtgtctggtc agagacatca agaaataacg ccggaacatt agtgcaggca gcttccacag
     4441 caatggcatc ctggtcatcc agcggatagt taatgatcag cccactgacg cgttgcgcga
     4501 gaagattgtg caccgccgct ttacaggctt cgacgccgct tcgttctacc atcgacacca
     4561 ccacgctggc acccagttga tcggcgcgag atttaatcgc cgcgacaatt tgcgacggcg
     4621 cgtgcagggc cagactggag gtggcaacgc caatcagcaa cgactgtttg cccgccagtt
     4681 gttgtgccac gcggttggga atgtaattca gctccgccat cgccgcttcc actttttccc
     4741 gcgttttcgc agaaacgtgg ctggcctggt tcaccacgcg ggaaacggtc tgataagaga
     4801 caccggcata ctctgcgaca tcgtataacg ttactggttt cacattcacc accctgaatt
     4861 gactctcttc cgggcgctat catgccatac cgcgaaaggt tttgcgccat tcgatggtgt
     4921 ccgggatctc gacgctctcc cttatgcgac tcctgcatta ggaagcagcc cagtagtagg
     4981 ttgaggccgt tgagcaccgc cgccgcaagg aatggtgcat gcaaggagat ggcgcccaac
     5041 agtcccccgg ccacggggcc tgccaccata cccacgccga aacaagcgct catgagcccg
     5101 aagtggcgag cccgatcttc cccatcggtg atgtcggcga tataggcgcc agcaaccgca
     5161 cctgtggcgc cggtgatgcc ggccacgatg cgtccggcgt agaggatcga gatctcgatc
     5221 ccgcgaaatt aatacgactc actatagggg aattgtgagc ggataacaat tcccctctag
     5281 aaataatttt gtttaacttt aagaaggaga tataccatgg tcggccagct gagcgagggg
     5341 gccattgcgg ccatcatgca gaagggggat acaaacataa agcccatcct ccaagtcatc
     5401 aacatccgtc ccattactac ggggaatagt ccgccgcgtt atcgactgct catgagtgat
     5461 ggattgaaca ctctatcctc tttcatgttg gcgacacagt tgaaccctct cgtggaggaa
     5521 gaacaattgt ccagcaactg tgtatgccag attcacagat ttattgtgaa cactctgaaa
     5581 gacggaagga gagtagttat cttgatggaa ttagaagttt tgaagtcagc tgaagcagtt
     5641 ggagtgaaga ttggcaatcc agtgccctat aatgaaggac tcgggcagcc gcaagtagct
     5701 cctccagcgc cagcagccag cccagcagca agcagcaggc cccagccgca gaatggaagc
     5761 tcgggaatgg gttctactgt ttctaaggct tatggtgctt caaagacatt tggaaaagct
     5821 gcaggtccca gcctgtcaca cacttctggg ggaacacagt ccaaagtggt gcccattgcc
     5881 agcctcactc cttaccagtc caagtggacc atttgtgctc gtgttaccaa caaaagtcag
     5941 atccgtacct ggagcaactc ccgaggggaa gggaagcttt tctccctaga actggttgac
     6001 gaaagtggtg aaatccgagc tacagctttc aatgagcaag tggacaagtt ctttcctctt
     6061 attgaagtga acaaggtgta ttatttctcg aaaggcaccc tgaagattgc taacaagcag
     6121 ttcacagctg ttaaaaatga ctacgagatg accttcaata acgagacttc cgtcatgccc
     6181 tgtgaggacg accatcattt acctacggtt cagtttgatt tcacggggat tgatgacctc
     6241 gagaacaagt cgaaagactc acttgtagac atcatcggga tctgcaagag ctatgaagac
     6301 gccactaaaa tcacagtgag gtctaacaac agagaagttg ccaagaggaa tatctacttg
     6361 atggacacat ccgggaaggt ggtgactgct acactgtggg gggaagatgc tgataaattt
     6421 gatggttcta gacagcccgt gttggctatc aaaggagccc gagtctctga tttcggtgga
     6481 cggagcctct ccgtgctgtc ttcaagcact atcattgcga atcctgacat cccagaggcc
     6541 tataagcttc gtggatggtt tgacgcagaa ggacaagcct tagatggtgt ttccatctct
     6601 gatctaaaga gcggcggagt cggagggagt aacaccaact ggaaaacctt gtatgaggtc
     6661 aaatccgaga acctgggcca aggcgacaag ccggactact ttagttctgt ggccacagtg
     6721 gtgtatcttc gcaaagagaa ctgcatgtac caagcctgcc cgactcagga ctgcaataag
     6781 aaagtgattg atcaacagaa tggattgtac cgctgtgaga agtgcgacac cgaatttccc
     6841 aatttcaagt accgcatgat cctgtcagta aatattgcag attttcaaga gaatcagtgg
     6901 gtgacttgtt tccaggagtc tgctgaagct atccttggac aaaatgctgc ttatcttggg
     6961 gaattaaaag acaagaatga acaggcattt gaagaagttt tccagaatgc caacttccga
     7021 tctttcatat tcagagtcag ggtcaaagtg gagacctaca acgacgagtc tcgaattaag
     7081 gccactgtga tggacgtgaa gcccgtggac tacagagagt atggccgaag gctggtcatg
     7141 agcatcagga gaagtgcatt gatgtgagag gagcagtgcc aatcgggcag aagtttgcaa
     7201 ataggcagaa tggaatcgat ttcctcccac ctccgtgtga cgatcccatg ttagctacac
     7261 agtgcagagg ctcttgatgg tggactaagc aattcctccc tcgtgcgcat ctcagaaccc
     7321 atcggtaggc aaaggaaaat acgctcaggt ggttgtggtg tagactgtgt caggcctacg
     7381 gagtcagcca gtggctagcg caagaccagt cactccctct gccttcaggc ttctgtcaat
     7441 ttcattatca tcaagcagga attatgtcgt aagtcactga ccctaactgc agaccatgaa
     7501 gtaaattatg taactaggtt tttgcttctc cagtggtgac cacccccccc catccccgct
     7561 cacaacttgg gttcttctca gcggggcgag ctgagaagcg gtcatgagca cctggggatt
     7621 ttagtaagtg tgtcttccta gaattcctgc agcccggggg atcctctaga aataattttg
     7681 tttaacttta agaaggagat ataccatggt ggacatgatg gacttgccca ggtcgcgcat
     7741 caacgccggc atgctagctc aattcatcga caagcctgtc tgcttcgtag ggaggctgga
     7801 aaagattcat cccaccggaa aaatgtttat tctttcagat ggagaaggaa aaaatggaac
     7861 catcgagttg atggaacccc ttgatgaaga aatctctgga attgtggaag tggttggaag
     7921 agtaaccgcc aaggccacca tcttgtgtac atcttatgtc cagtttaaag aagatagcca
     7981 tccttttgat cttggacttt acaatgaagc tgtgaaaatt atccatgact tccctcagtt
     8041 ttatccttta gggattgtgc aacatgattg atcttgatgg attttcatac gattgtaaat
     8101 gagctatatt aaagtctatt aaaggaagcc cttcttgttt gagggagaga tttctgtgct
     8161 ttctcatatt taatttgctg tttttaagat attccaacct agagtttttg atggaactga
     8221 tatattgaca gttctcaccg aagccctttt ataaagaatt gctactccaa tatatggtca
     8281 gattagatgc aagaataaag cagttgtccg agtctaagtt tctattttat taataaaaac
     8341 taaaaatggt acgtacaaaa aaaaaaccgg aattcgagct cggtacccgg ggatcctaga
     8401 aataattttg tttaacttta agaaggagat atacatatgt ggaacagtgg attcgaaagc
     8461 tatggcagct cctcatacgg gggagccggc ggctacacgc agtccccggg gggctttgga
     8521 tcgcccgcac cttctcaagc cgaaaagaaa tcaagagccc gagcccagca cattgtgccc
     8581 tgtactatat ctcagctgct ttctgccact ttggttgatg aagtgttcag aattgggaat
     8641 gttgagattt cacaggtcac tattgtgggg atcatcagac atgcagagaa ggctccaacc
     8701 aacattgttt acaaaataga tgacatgaca gctgcaccca tggacgttcg ccagtgggtt
     8761 gacacagatg acaccagcag tgaaaacact gtggttcctc cagaaacata tgtgaaagtg
     8821 gcaggccacc tgagatcttt tcagaacaaa aagagcctgg tagcctttaa gatcatgccc
     8881 ctggaggata tgaatgagtt caccacacat attctggaag tgatcaatgc acacatggta
     8941 ctaagcaaag ccaacagcca gccctcagca gggagagcac ctatcagcaa tccaggaatg
     9001 agtgaagcag ggaactttgg tgggaatagc ttcatgccag caaatggcct cactgtggcc
     9061 caaaaccagg tgttgaattt gattaaggct tgtccaagac ctgaagggtt gaactttcag
     9121 gatctcaaga accagctgaa acacatgtct gtatcctcaa tcaagcaagc tgtggatttt
     9181 ctgagcaatg aggggcacat ctattctact gtggatgatg accattttaa atccacagat
     9241 gcagaataac tggatctaac tgggtacctg agatatttta cagctggacc tagtttcaca
     9301 atctgttgtc tccggatcgg ctgctaacaa agcccgaaag gaagctgagt tggctgctgc
     9361 caccgctgag cggctgctaa caaagcccga aaggaagctg agttggctgc tgccaccgct
     9421 gagcaataac tagcataacc ccttggggcc tctaaacggg tcttgagggg ttttttgctg
     9481 aaaggaggaa ctatatccgg atatcccgca agaggcccgg cagtaccggc ataaccaagc
     9541 ctatgcctac agcatccagg gtgacggtgc cgaggatgac gatgagcgca ttgttagatt
     9601 tcatacacgg tgcctgactg cgttagcaat ttaactgtga taaactaccg cattaaagct
     9661 tatcgatgat aagctgtcaa acatgagaa
//
