LOCUS       sequence-465022-        8633 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  Retroviral expression of Lhx3, Isl1, and Ngn2x3HA for motor neuron 
            reprogramming.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 8633)
  AUTHORS   Wang NB, Adewumi HO, Lende-Dorn BA, Beitz AM, O'Shea TM, Galloway KE
  TITLE     Compact transcription factor cassettes generate functional, 
            engraftable motor neurons by direct conversion.
  JOURNAL   Cell Syst. 2025 Mar 10:101206. doi: 10.1016/j.cels.2025.101206.
  PUBMED    40086435
REFERENCE   2  (bases 1 to 8633)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Cell Syst. 
            2025 Mar 10:101206. doi: 10.1016/j.cels.2025.101206."
COMMENT     Sequence Label: pMXs-LIN (with mNgn2x3HA)
FEATURES             Location/Qualifiers
     source          1..8633
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     117..133
                     /label=pBMN 5'
                     /note="MMLV sequence, for inserts in pBMN retroviral 
                     vector"
     protein_bind    222..246
                     /gene="mutant version of attB"
                     /label=attB1
                     /bound_moiety="BP Clonase(TM)"
                     /note="recombination site for the Gateway(R) BP reaction"
     CDS             1504..1560
                     /codon_start=1
                     /product="2A peptide from porcine teschovirus-1 
                     polyprotein"
                     /label=P2A
                     /note="Eukaryotic ribosomes fail to insert a peptide bond 
                     between the Gly and Pro residues, yielding separate 
                     polypeptides."
                     /translation="ATNFSLLKQAGDVEENPGP"
     regulatory      2351..2360
                     /label=Kozak sequence
                     /note="vertebrate consensus sequence for strong initiation 
                     of translation (Kozak, 1987)"
                     /regulatory_class="other"
     CDS             2617..2670
                     /codon_start=1
                     /product="2A peptide from Thosea asigna virus capsid 
                     protein"
                     /label=T2A
                     /note="Eukaryotic ribosomes fail to insert a peptide bond 
                     between the Gly and Pro residues, yielding separate 
                     polypeptides."
                     /translation="EGRGSLLTCGDVEENPGP"
     CDS             3499..3525
                     /codon_start=1
                     /product="HA (human influenza hemagglutinin) epitope tag"
                     /label=HA
                     /translation="YPYDVPDYA"
     CDS             3535..3561
                     /codon_start=1
                     /product="HA (human influenza hemagglutinin) epitope tag"
                     /label=HA
                     /translation="YPYDVPDYA"
     CDS             3571..3597
                     /codon_start=1
                     /product="HA (human influenza hemagglutinin) epitope tag"
                     /label=HA
                     /translation="YPYDVPDYA"
     protein_bind    complement(3614..3638)
                     /gene="mutant version of attB"
                     /label=attB2
                     /bound_moiety="BP Clonase(TM)"
                     /note="recombination site for the Gateway(R) BP reaction"
     misc_feature    3655..4243
                     /label=WPRE
                     /note="woodchuck hepatitis virus posttranscriptional 
                     regulatory element"
     primer_bind     complement(3708..3728)
                     /label=WPRE-R
                     /note="WPRE, reverse primer"
     CDS             complement(4126..4137)
                     /codon_start=1
                     /product="Factor Xa recognition and cleavage site"
                     /label=Factor Xa site
                     /translation="IEGR"
     LTR             4423..4892
                     /note="long terminal repeat from Moloney murine leukemia 
                     virus"
     primer_bind     complement(5022..5039)
                     /label=L4440
                     /note="L4440 vector, forward primer"
     rep_origin      complement(5193..5781)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     complement(5273..5292)
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     CDS             complement(join(5945..6736,6737..6805))
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     6568..6587
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     promoter        complement(6806..6910)
                     /gene="bla"
                     /label=AmpR promoter
     LTR             6940..7533
                     /note="long terminal repeat from Moloney murine leukemia 
                     virus"
     misc_feature    7596..7953
                     /label=MMLV Psi
                     /note="packaging signal of Moloney murine leukemia virus 
                     (MMLV)"
     CDS             8012..8428
                     /label=gag (truncated)
                     /note="truncated Moloney murine leukemia virus (MMLV) gag 
                     gene lacking the start codon"
     primer_bind     8358..8380
                     /label=pLXSN 5'
                     /note="Murine stem cell virus, forward primer. Also called 
                     MSCV"
     primer_bind     8396..8412
                     /label=pBABE 5'
                     /note="Psi packaging signal, forward primer for pBABE 
                     vectors"
     misc_feature    join(8438..8633,1..179)
                     /label=pol region
                     /note="Moloney murine leukemia virus (MMLV) pol region 
                     containing the splice acceptor site"
ORIGIN
        1 tcggcgacac agtgtgggtc cgccgacacc agactaagaa cctagaacct cgctggaaag
       61 gaccttacac agtcctgctg accaccccca ccgccctcaa agtagacggc atcgcagctt
      121 ggatacacgc cgcccacgtg aaggctgccg accccggggg tggaccatcc tctagactgc
      181 cggatctagc tagttaatcg acggtatcga taagctatca aacaagtttg tacaaaaaag
      241 caggctccac catgggaacc aattcagtcg actggatccg gtactactgc caccatgctg
      301 ctagaagcag aactcgattg ccaccgagag aggcccggtg cccctggagc ttctgccctc
      361 tgtaccttca gcaggactcc agagatcccg atgtgtgcag gctgtgacca gcacatcttg
      421 gaccgtttca tccttaaggc tctggaccga cattggcaca gcaagtgtct caagtgcagt
      481 gactgccacg tccctctggc tgagcgctgc ttcagccgcg gggagagcgt ctactgcaaa
      541 gacgacttct ttaagcgctt cgggaccaag tgcgccgcat gccagctggg catcccgccc
      601 acgcaggtgg tgcgccgcgc ccaggacttc gtgtaccacc tgcattgctt cgcctgcgtg
      661 gtctgcaagc ggcagctggc cacgggcgac gagttctacc tcatggaaga cagccggctg
      721 gtgtgcaagg cggactacga aacagccaag cagcgagaag ccgaggccac agccaagcgg
      781 ccgcgcacca ccatcaccgc caagcagctg gagacgctga agagcgccta caacacttcg
      841 cccaagccgg cgcgccacgt gcgcgagcag ctctcctccg agactggcct ggacatgcga
      901 gtggtgcagg tgtggttcca gaatcgccgg gctaaggaaa agagactgaa gaaagacgct
      961 ggccggcagc gctggggaca gtatttccgc aatatgaagc gctcccgcgg cagttccaag
     1021 tccgacaagg acagcatcca ggagggacaa gacagcgacg ccgaagtctc cttcactgat
     1081 gagccgtcca tggctgacat ggggcctgct aatggcctgt acagcagcct gggagagcct
     1141 gcccctgcgt tgggccggcc cgtaggaggc ctgggcagct ttaccctgga tcacggaggc
     1201 ttgacgggtc cagagcagta ccgagagcta cgcccaggca gcccctatgg catcccccca
     1261 tctcctgcag ccccccagag ccttcctggc ccccagcctc tcctctccag cctggtatac
     1321 ccagacacca acttgagcct tgtcccttca gggcccccag gtggaccccc acccatgagg
     1381 gtgctggctg gaaatgggcc cagctccgac ctgtccacag agagcagttc tggctaccca
     1441 gactttcctg ctagccctgc ttcctggctg gatgaagtag accatgctca gttcggaagc
     1501 ggagctacta acttcagcct gctgaagcag gctggagacg tggaggagaa ccctggacct
     1561 atgggagaca tgggcgatcc accaaaaaaa aaacgtctga tttccctgtg tgttggttgc
     1621 ggcaatcaaa ttcacgacca gtatattctg agggtttctc cggatttgga gtggcatgca
     1681 gcatgtttga aatgtgcgga gtgtaatcag tatttggacg aaagctgtac gtgctttgtt
     1741 agggatggga aaacctactg taaaagagat tatatcaggt tgtacgggat caaatgcgcc
     1801 aagtgcagca taggcttcag caagaacgac ttcgtgatgc gcgcccgctc taaggtgtac
     1861 cacatcgagt gtttccgctg tgtagcctgc agccgacagc tcatcccggg agacgaattc
     1921 gccctgcggg aggatgggct tttctgccgt gcagaccacg atgtggtgga gagagccagc
     1981 ctgggagctg gagatcctct cagtcccttg catccagcgc ggcctctgca aatggcagcc
     2041 gaacccatct cggctaggca gccagctctg cggccgcacg tccacaagca gccggagaag
     2101 accacccgag tgcggactgt gctcaacgag aagcagctgc acaccttgcg gacctgctat
     2161 gccgccaacc ctcggccaga tgcgctcatg aaggagcaac tagtggagat gacgggcctc
     2221 agtcccagag tcatccgagt gtggtttcaa aacaagcggt gcaaggacaa gaaacgcagc
     2281 atcatgatga agcagctcca gcagcagcaa cccaacgaca aaactaatat ccaggggatg
     2341 acaggaactc ccatggtggc tgctagtccg gagagacatg atggtggttt acaggctaac
     2401 ccagtagagg tgcaaagtta ccagccgccc tggaaagtac tgagtgactt cgccttgcaa
     2461 agcgacatag atcagcctgc ttttcagcaa ctggtcaatt tttcagaagg aggaccaggc
     2521 tctaattcta ctggcagtga agtagcatcg atgtcctcgc agctcccaga tacacccaac
     2581 agcatggtag ccagtcctat tgaggcaggc agtggtgagg gcagaggaag tctgctaaca
     2641 tgcggtgacg tcgaggagaa tcctggccca atgttcgtca aatctgagac tctggagttg
     2701 aaggaggaag aggaggtact gatgctgctg ggctcggctt ccccggcctc ggcgaccctg
     2761 accccgatgt cctccagcgc ggacgaggag gaggacgagg agctgcgccg gccgggctcc
     2821 gcgcgtgggc agcgtggagc ggaagccggg cagggggtgc agggcagtcc ggcgtcgggt
     2881 gccgggggtt gccggccagg gcggctgctg ggcctgatgc acgagtgcaa gcgtcgcccg
     2941 tcgcgctcac gggccgtctc ccgaggtgcc aagacggcgg agacggtgca gcgcatcaag
     3001 aagacccgca ggctcaaggc caacaaccgc gagcgcaacc gcatgcacaa cctaaacgcc
     3061 gcgctggacg cgctgcgcga ggtgctgccc accttccccg aggatgccaa gctcacgaag
     3121 atcgagacgc tgcgcttcgc ccacaattac atctgggcgc tcaccgagac tctgcgcctg
     3181 gcggaccact gcgccggcgc cggtggcctc cagggggcgc tcttcacgga ggcggtgctc
     3241 ctgagcccgg gagctgcgct cggcgccagc ggggacagcc cttctccacc ttcctcctgg
     3301 agctgcacca acagcccggc gtcatcctcc aactccacgt ccccatacag ctgcacttta
     3361 tcgcccgcta gccccgggtc agacgtggac tactggcagc ccccacctcc ggagaagcat
     3421 cgttatgcgc ctcacctgcc cctcgccagg gactgtatcg ggtctggctc cggatcaagt
     3481 ggtggcagcg gatcaggata tccatacgat gtaccagact atgcgggatc gggttacccc
     3541 tacgacgtcc ccgactacgc cggctccggc tacccctacg acgtccctga ttatgcttag
     3601 cgctgatatc tagacccagc tttcttgtac aaagtggttc gatagcttat cgataatcaa
     3661 cctctggatt acaaaatttg tgaaagattg actggtattc ttaactatgt tgctcctttt
     3721 acgctatgtg gatacgctgc tttaatgcct ttgtatcatg ctattgcttc ccgtatggct
     3781 ttcattttct cctccttgta taaatcctgg ttgctgtctc tttatgagga gttgtggccc
     3841 gttgtcaggc aacgtggcgt ggtgtgcact gtgtttgctg acgcaacccc cactggttgg
     3901 ggcattgcca ccacctgtca gctcctttcc gggactttcg ctttccccct ccctattgcc
     3961 acggcggaac tcatcgccgc ctgccttgcc cgctgctgga caggggctcg gctgttgggc
     4021 actgacaatt ccgtggtgtt gtcggggaaa tcatcgtcct ttccttggct gctcgcctgt
     4081 gttgccacct ggattctgcg cgggacgtcc ttctgctacg tcccttcggc cctcaatcca
     4141 gcggaccttc cttcccgcgg cctgctgccg gctctgcggc ctcttccgcg tcttcgcctt
     4201 cgccctcaga cgagtcggat ctccctttgg gccgcctccc cgcatcgata ccgtcgacga
     4261 taaaataaaa gattttattt agtctccaga aaaagggggg aatgaaagac cccacctgta
     4321 ggtttggcaa gctagcttaa gtaacgccat tttgcaaggc atggaaaaat acataactga
     4381 gaatagagaa gttcagatca aggtcaggaa cagatggaac agctgaatat gggccaaaca
     4441 ggatatctgt ggtaagcagt tcctgccccg gctcagggcc aagaacagat ggaacagctg
     4501 aatatgggcc aaacaggata tctgtggtaa gcagttcctg ccccggctca gggccaagaa
     4561 cagatggtcc ccagatgcgg tccagccctc agcagtttct agagaaccat cagatgtttc
     4621 cagggtgccc caaggacctg aaatgaccct gtgccttatt tgaactaacc aatcagttcg
     4681 cttctcgctt ctgttcgcgc gcttctgctc cccgagctca ataaaagagc ccacaacccc
     4741 tcactcggcg cgccagtcct ccgattgact gagtcgcccg ggtacccgtg tatccaataa
     4801 accctcttgc agttgcatcc gacttgtggt ctcgctgttc cttgggaggg tctcctctga
     4861 gtgattgact acccgtcagc gggggtcttt cacatgcagc atgtatcaaa attaatttgg
     4921 ttttttttct taagtattta cattaaatgg ccatagttgc attaatgaat cggccaacgc
     4981 gcggggagag gcggtttgcg tattgggcgc tcttccgctt cctcgctcac tgactcgctg
     5041 cgctcggtcg ttcggctgcg gcgagcggta tcagctcact caaaggcggt aatacggtta
     5101 tccacagaat caggggataa cgcaggaaag aacatgtgag caaaaggcca gcaaaaggcc
     5161 aggaaccgta aaaaggccgc gttgctggcg tttttccata ggctccgccc ccctgacgag
     5221 catcacaaaa atcgacgctc aagtcagagg tggcgaaacc cgacaggact ataaagatac
     5281 caggcgtttc cccctggaag ctccctcgtg cgctctcctg ttccgaccct gccgcttacc
     5341 ggatacctgt ccgcctttct cccttcggga agcgtggcgc tttctcatag ctcacgctgt
     5401 aggtatctca gttcggtgta ggtcgttcgc tccaagctgg gctgtgtgca cgaacccccc
     5461 gttcagcccg accgctgcgc cttatccggt aactatcgtc ttgagtccaa cccggtaaga
     5521 cacgacttat cgccactggc agcagccact ggtaacagga ttagcagagc gaggtatgta
     5581 ggcggtgcta cagagttctt gaagtggtgg cctaactacg gctacactag aagaacagta
     5641 tttggtatct gcgctctgct gaagccagtt accttcggaa aaagagttgg tagctcttga
     5701 tccggcaaac aaaccaccgc tggtagcggt ggtttttttg tttgcaagca gcagattacg
     5761 cgcagaaaaa aaggatctca agaagatcct ttgatctttt ctacggggtc tgacgctcag
     5821 tggaacgaaa actcacgtta agggattttg gtcatgagat tatcaaaaag gatcttcacc
     5881 tagatccttt tgcggccggc cgcaaatcaa tctaaagtat atatgagtaa acttggtctg
     5941 acagttacca atgcttaatc agtgaggcac ctatctcagc gatctgtcta tttcgttcat
     6001 ccatagttgc ctgactcccc gtcgtgtaga taactacgat acgggagggc ttaccatctg
     6061 gccccagtgc tgcaatgata ccgcgagacc cacgctcacc ggctccagat ttatcagcaa
     6121 taaaccagcc agccggaagg gccgagcgca gaagtggtcc tgcaacttta tccgcctcca
     6181 tccagtctat taattgttgc cgggaagcta gagtaagtag ttcgccagtt aatagtttgc
     6241 gcaacgttgt tgccattgct acaggcatcg tggtgtcacg ctcgtcgttt ggtatggctt
     6301 cattcagctc cggttcccaa cgatcaaggc gagttacatg atcccccatg ttgtgcaaaa
     6361 aagcggttag ctccttcggt cctccgatcg ttgtcagaag taagttggcc gcagtgttat
     6421 cactcatggt tatggcagca ctgcataatt ctcttactgt catgccatcc gtaagatgct
     6481 tttctgtgac tggtgagtac tcaaccaagt cattctgaga atagtgtatg cggcgaccga
     6541 gttgctcttg cccggcgtca atacgggata ataccgcgcc acatagcaga actttaaaag
     6601 tgctcatcat tggaaaacgt tcttcggggc gaaaactctc aaggatctta ccgctgttga
     6661 gatccagttc gatgtaaccc actcgtgcac ccaactgatc ttcagcatct tttactttca
     6721 ccagcgtttc tgggtgagca aaaacaggaa ggcaaaatgc cgcaaaaaag ggaataaggg
     6781 cgacacggaa atgttgaata ctcatactct tcctttttca atattattga agcatttatc
     6841 agggttattg tctcatgagc ggatacatat ttgaatgtat ttagaaaaat aaacaaatag
     6901 gggttccgcg cacatttccc cgaaaagtgc cacctgcata atgaaagacc ccacctgtag
     6961 gtttggcaag ctagcttaag taacgccatt ttgcaaggca tggaaaaata cataactgag
     7021 aatagaaaag ttcagatcaa ggtcaggaac agatggaaca gctgaatatg ggccaaacag
     7081 gatatctgtg gtaagcagtt cctgccccgg ctcagggcca agaacagatg gaacagctga
     7141 atatgggcca aacaggatat ctgtggtaag cagttcctgc cccggctcag ggccaagaac
     7201 agatggtccc cagatgcggt ccagccctca gcagtttcta gagaaccatc agatgtttcc
     7261 agggtgcccc aaggacctga aatgaccctg tgccttattt gaactaacca atcagttcgc
     7321 ttctcgcttc tgttcgcgcg cttctgctcc ccgagctcaa taaaagagcc cacaacccct
     7381 cactcggcgc gccagtcctc cgattgactg agtcgcccgg gtacccgtgt atccaataaa
     7441 ccctcttgca gttgcatccg acttgtggtc tcgctgttcc ttgggagggt ctcctctgag
     7501 tgattgacta cccgtcagcg ggggtctttc atttgggggc tcgtccggga tcgggagacc
     7561 cctgcccagg gaccaccgac ccaccaccgg gaggtaagct ggccagcaac ttatctgtgt
     7621 ctgtccgatt gtctagtgtc tatgactgat tttatgcgcc tgcgtcggta ctagttagct
     7681 aactagctct gtatctggcg gacccgtggt ggaactgacg agttcggaac acccggccgc
     7741 aaccctggga gacgtcccag ggacttcggg ggccgttttt gtggcccgac ctgagtccaa
     7801 aaatcccgat cgttttggac tctttggtgc acccccctaa taggagggat atgtggttct
     7861 ggtaggagac gagaacctaa aacagttccc gcctccgtct gaatttttgc tttcggtttg
     7921 ggaccgaagc cgcgccgcgc gtcttgtctg ctgcagcatc gttctgtgtt gtctctgtct
     7981 gactgtgttt ctgtatttgt ctgaaaatta gggccagact gttaccactc ccttaagttt
     8041 gaccttaggt cactggaaag atgtcgagcg gatcgctcac aaccagtcgg tagatgtcaa
     8101 gaagagacgt tgggttacct tctgctctgc agaatggcca acctttaacg tcggatggcc
     8161 gcgagacggc acctttaacc gagacctcat cacccaggtt aagatcaagg tcttttcacc
     8221 tggcccgcat ggacacccag accaggtccc ctacatcgtg acctgggaag ccttggcttt
     8281 tgacccccct ccctgggtca agccctttgt acaccctaag cctccgcctc ctcttcctcc
     8341 atccgccccg tctctccccc ttgaacctcc tcgttcgacc ccgcctcgat cctcccttta
     8401 tccagccctc actccttctc taggcgcccc catatggcca tatgagatct tatatggggc
     8461 acccccgccc cttgtaaact tccctgaccc tgacatgaca agagttacta acagcccctc
     8521 tctccaagct cacttacagg ctctctactt agtccagcac gaagtctgga gacctctggc
     8581 ggcagcctac caagaacaac tggaccgacc ggtggtacct cacccttacc gag
//
