LOCUS       sequence-75747-e        7181 bp    DNA     circular SYN 15-DEC-2025
DEFINITION  synthetic circular DNA
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 7181)
  AUTHORS   Markus SM, Omer S, Baranowski K, Lee WL
  TITLE     Improved Plasmids for Fluorescent Protein Tagging of Microtubules in
            Saccharomyces cerevisiae.
  JOURNAL   Traffic. 2015 Jul;16(7):773-86. doi: 10.1111/tra.12276. Epub 2015 
            Apr 28.
  PUBMED    25711127
REFERENCE   2  (bases 1 to 7181)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; doi: "10.1111/tra.12276";
            journalName: "Traffic"; date: "2015-07"; volume: "16"; issue: "7"; 
            pages: "773-86"
COMMENT     Sequence Label: pHIS3p:Venus-Tub1+3'UTR::HPH
FEATURES             Location/Qualifiers
     source          1..7181
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     72..94
                     /label=pGEX 3'
                     /note="pGEX vectors, reverse primer"
     primer_bind     complement(132..150)
                     /label=pBRforEco
                     /note="pBR322 vectors, upsteam of EcoRI site, forward 
                     primer"
     promoter        218..322
                     /gene="bla"
                     /label=AmpR promoter
     CDS             join(323..391,392..1183)
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     complement(541..560)
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     rep_origin      1354..1942
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     1843..1862
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     primer_bind     2096..2113
                     /label=L4440
                     /note="L4440 vector, forward primer"
     primer_bind     2200..2219
                     /label=T7
                     /note="T7 promoter, forward primer"
     promoter        2200..2218
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     gene            complement(2326..3901)
                     /label=hphMX6
                     /note="yeast selectable marker conferring hygromycin 
                     resistance"
     terminator      complement(2326..2523)
                     /label=TEF terminator
                     /note="Ashbya gossypii TEF terminator"
     CDS             complement(2529..3557)
                     /codon_start=1
                     /product="hygromycin B phosphotransferase"
                     /label=HygR
                     /note="confers resistance to hygromycin"
                     /translation="MGKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGR
                     GYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDL
                     PETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHW
                     QTVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAM
                     FGDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVD
                     GNFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRA
                     KE"
     CDS             complement(2529..3557)
                     /codon_start=1
                     /gene="aph(4)-Ia"
                     /product="aminoglycoside phosphotransferase from E. coli"
                     /label=HygR
                     /note="confers resistance to hygromycin"
                     /translation="MGKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGR
                     GYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDL
                     PETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHW
                     QTVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAM
                     FGDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVD
                     GNFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRA
                     KE"
     promoter        complement(3558..3901)
                     /label=TEF promoter
                     /note="Ashbya gossypii TEF promoter"
     promoter        4009..4195
                     /gene="S. cerevisiae HIS3"
                     /label=HIS3 promoter
     CDS             4197..4910
                     /codon_start=1
                     /product="yeast-enhanced green fluorescent protein"
                     /label=yeGFP
                     /note="codons optimized for translation in S. cerevisiae 
                     and C. albicans"
                     /translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
                     LICTTGKLPVPWPTLVTTLGYGLQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
                     NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKA
                     NFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLE
                     FVTAAGITHGMDELYK"
     RBS             6395..6403
                     /label=Shine-Dalgarno sequence
                     /note="full consensus sequence for ribosome-binding sites 
                     upstream of start codons in E. coli; complementary to a 
                     region in the 3' end of the 16S rRNA (Chen et al., 1994)"
     promoter        complement(7035..7053)
                     /label=SP6 promoter
                     /note="promoter for bacteriophage SP6 RNA polymerase"
     primer_bind     complement(7036..7053)
                     /label=SP6
                     /note="SP6 promoter, forward primer"
     primer_bind     complement(7134..7153)
                     /label=pRS-marker
                     /note="pRS vectors, use to sequence yeast selectable 
                     marker"
ORIGIN
        1 aacacccgct gacgcgccct gacgggcttg tctgctcccg gcatccgctt acagacaagc
       61 tgtgaccgtc tccgggagct gcatgtgtca gaggttttca ccgtcatcac cgaaacgcgc
      121 gagacgaaag ggcctcgtga tacgcctatt tttataggtt aatgtcatga taataatggt
      181 ttcttagacg tcaggtggca cttttcgggg aaatgtgcgc ggaaccccta tttgtttatt
      241 tttctaaata cattcaaata tgtatccgct catgagacaa taaccctgat aaatgcttca
      301 ataatattga aaaaggaaga gtatgagtat tcaacatttc cgtgtcgccc ttattccctt
      361 ttttgcggca ttttgccttc ctgtttttgc tcacccagaa acgctggtga aagtaaaaga
      421 tgctgaagat cagttgggtg cacgagtggg ttacatcgaa ctggatctca acagcggtaa
      481 gatccttgag agttttcgcc ccgaagaacg ttttccaatg atgagcactt ttaaagttct
      541 gctatgtggc gcggtattat cccgtattga cgccgggcaa gagcaactcg gtcgccgcat
      601 acactattct cagaatgact tggttgagta ctcaccagtc acagaaaagc atcttacgga
      661 tggcatgaca gtaagagaat tatgcagtgc tgccataacc atgagtgata acactgcggc
      721 caacttactt ctgacaacga tcggaggacc gaaggagcta accgcttttt tgcacaacat
      781 gggggatcat gtaactcgcc ttgatcgttg ggaaccggag ctgaatgaag ccataccaaa
      841 cgacgagcgt gacaccacga tgcctgtagc aatggcaaca acgttgcgca aactattaac
      901 tggcgaacta cttactctag cttcccggca acaattaata gactggatgg aggcggataa
      961 agttgcagga ccacttctgc gctcggccct tccggctggc tggtttattg ctgataaatc
     1021 tggagccggt gagcgtgggt ctcgcggtat cattgcagca ctggggccag atggtaagcc
     1081 ctcccgtatc gtagttatct acacgacggg gagtcaggca actatggatg aacgaaatag
     1141 acagatcgct gagataggtg cctcactgat taagcattgg taactgtcag accaagttta
     1201 ctcatatata ctttagattg atttaaaact tcatttttaa tttaaaagga tctaggtgaa
     1261 gatccttttt gataatctca tgaccaaaat cccttaacgt gagttttcgt tccactgagc
     1321 gtcagacccc gtagaaaaga tcaaaggatc ttcttgagat cctttttttc tgcgcgtaat
     1381 ctgctgcttg caaacaaaaa aaccaccgct accagcggtg gtttgtttgc cggatcaaga
     1441 gctaccaact ctttttccga aggtaactgg cttcagcaga gcgcagatac caaatactgt
     1501 ccttctagtg tagccgtagt taggccacca cttcaagaac tctgtagcac cgcctacata
     1561 cctcgctctg ctaatcctgt taccagtggc tgctgccagt ggcgataagt cgtgtcttac
     1621 cgggttggac tcaagacgat agttaccgga taaggcgcag cggtcgggct gaacgggggg
     1681 ttcgtgcaca cagcccagct tggagcgaac gacctacacc gaactgagat acctacagcg
     1741 tgagcattga gaaagcgcca cgcttcccga agggagaaag gcggacaggt atccggtaag
     1801 cggcagggtc ggaacaggag agcgcacgag ggagcttcca gggggaaacg cctggtatct
     1861 ttatagtcct gtcgggtttc gccacctctg acttgagcgt cgatttttgt gatgctcgtc
     1921 aggggggcgg agcctatgga aaaacgccag caacgcggcc tttttacggt tcctggcctt
     1981 ttgctggcct tttgctcaca tgttctttcc tgcgttatcc cctgattctg tggataaccg
     2041 tattaccgcc tttgagtgag ctgataccgc tcgccgcagc cgaacgaccg agcgcagcga
     2101 gtcagtgagc gaggaagcgg aagagcgccc aatacgcaaa ccgcctctcc ccgcgcgttg
     2161 gccgattcat taatgcaggt taacctggct tatcgaaatt aatacgactc actataggga
     2221 gaccggcaga tccgcggccg cataggccac tagtggatct gatatcatcg atgaattcga
     2281 gctcgttttc gacactggat ggcggcgtta gtatcgaatc gacagcagta tagcgaccag
     2341 cattcacata cgattgacgc atgatattac tttctgcgca cttaacttcg catctgggca
     2401 gatgatgtcg aggcgaaaaa aaatataaat cacgctaaca tttgattaaa atagaacaac
     2461 tacaatataa aaaaactata caaatgacaa gttcttgaaa acaagaatct ttttattgtc
     2521 agtactgatt attcctttgc cctcggacga gtgctggggc gtcggtttcc actatcggcg
     2581 agtacttcta cacagccatc ggtccagacg gccgcgcttc tgcgggcgat ttgtgtacgc
     2641 ccgacagtcc cggctccgga tcggacgatt gcgtcgcatc gaccctgcgc ccaagctgca
     2701 tcatcgaaat tgccgtcaac caagctctga tagagttggt caagaccaat gcggagcata
     2761 tacgcccgga gccgcggcga tcctgcaagc tccggatgcc tccgctcgaa gtagcgcgtc
     2821 tgctgctcca tacaagccaa ccacggcctc cagaagaaga tgttggcgac ctcgtattgg
     2881 gaatccccga acatcgcctc gctccagtca atgaccgctg ttatgcggcc attgtccgtc
     2941 aggacattgt tggagccgaa atccgcgtgc acgaggtgcc ggacttcggg gcagtcctcg
     3001 gcccaaagca tcagctcatc gagagcctgc gcgacggacg cactgacggt gtcgtccatc
     3061 acagtttgcc agtgatacac atggggatca gcaatcgcgc atatgaaatc acgccatgta
     3121 gtgtattgac cgattccttg cggtccgaat gggccgaacc cgctcgtctg gctaagatcg
     3181 gccgcagcga tcgcatccat ggcctccgcg accggctgca gaacagcggg cagttcggtt
     3241 tcaggcaggt cttgcaacgt gacaccctgt gcacggcggg agatgcaata ggtcaggctc
     3301 tcgctgaatt ccccaatgtc aagcacttcc ggaatcggga gcgcggccga tgcaaagtgc
     3361 cgataaacat aacgatcttt gtagaaacca tcggcgcagc tatttacccg caggacatat
     3421 ccacgccctc ctacatcgaa gctgaaagca cgagattctt cgccctccga gagctgcatc
     3481 aggtcggaga cgctgtcgaa cttttcgatc agaaacttct cgacagacgt cgcggtgagt
     3541 tcaggctttt tacccatggt tgtttatgtt cggatgtgat gtgagaactg tatcctagca
     3601 agattttaaa aggaagtata tgaaagaaga acctcagtgg caaatcctaa ccttttatat
     3661 ttctctacag gggcgcggcg tggggacaat tcaacgcgtc tgtgagggga gcgtttccct
     3721 gctcgcaggt ctgcagcgag gagccgtaat ttttgcttcg cgccgtgcgg ccatcaaaat
     3781 gtatggatgc aaatgattat acatggggat gtatgggcta aatgtacggg cgacagtcac
     3841 atcatgcccc tgagctgcgc acgtcaagac tgtcaaggag ggtattctgg gcctccatgt
     3901 cgctggccgg gtgacccggc ggggacgagg caagctaaac agatctggcg cgccttaatt
     3961 aaccactaaa gggaacaaaa gctggtaccc tattactctt ggcctcctct agtacactct
     4021 atattttttt atgcctcggt aatgattttc attttttttt tccacctagc ggatgactct
     4081 ttttttttct tagcgattgg cattatcaca taatgaatta tacattatat aaagtaatgt
     4141 gatttcttcg aagaatatac taaaaaatga gcaggcaaga taaacgaagg caaagcatgt
     4201 ctaaaggtga agaattattc actggtgttg tcccaatttt ggttgaatta gatggtgatg
     4261 ttaatggtca caaattttct gtctccggtg aaggtgaagg tgatgctact tacggtaaat
     4321 tgaccttaaa attgatttgt actactggta aattgccagt tccatggcca accttagtca
     4381 ctactttagg ttatggtttg caatgttttg ctagataccc agatcatatg aaacaacatg
     4441 actttttcaa gtctgccatg ccagaaggtt atgttcaaga aagaactatt tttttcaaag
     4501 atgacggtaa ctacaagacc agagctgaag tcaagtttga aggtgatacc ttagttaata
     4561 gaatcgaatt aaaaggtatt gattttaaag aagatggtaa cattttaggt cacaaattgg
     4621 aatacaacta taactctcac aatgtttaca tcactgctga caaacaaaag aatggtatca
     4681 aagctaactt caaaattaga cacaacattg aagatggtgg tgttcaatta gctgaccatt
     4741 atcaacaaaa tactccaatt ggtgatggtc cagtcttgtt accagacaac cattacttat
     4801 cctatcaatc tgccttatcc aaagatccaa acgaaaagag agaccacatg gtcttgttag
     4861 aatttgttac tgctgctggt attacccatg gtatggatga attgtacaaa ggatccatga
     4921 gagaagttat tagtattaat ggtatgttcg atttgcccgt ccaggctaga tctttttttt
     4981 gttagttcat tttggcgttt catctttcat tactaacttc aacgcaaaat tttttttttt
     5041 ttgatttctc tttacagtcg gtcaagctgg ttgtcagatt ggtaatgcct gttgggaatt
     5101 atattccctt gagcacggta ttaagccgga tggacatcta gaagatggcc tttcaaagcc
     5161 gaagggagga gaagagggtt tctccacgtt tttccatgaa accggctacg gtaagttcgt
     5221 tccaagggct atttacgtgg atttagagcc caacgttatt gacgaagtcc gtaacggtcc
     5281 ttacaaggac ttgttccatc cagaacagtt gatcagtggt aaggaggacg cggctaataa
     5341 ttatgcaaga ggccattaca ccgttggtag agaaattttg ggcgatgttc tggataggat
     5401 tagaaaactg gcagaccaat gtgatgggtt acaagggttc ttgtttaccc attctcttgg
     5461 tggtggtact ggttccggtc tagggtcctt actgttggaa gaactatccg ctgaatacgg
     5521 taagaaatcc aagctggaat ttgccgtata ccctgctcca caagtgtcta cttctgtggt
     5581 tgagccttac aacacagttt taactacaca tactacattg gaacatgcag attgtacttt
     5641 catggtcgat aatgaggcta tttacgacat gtgcaaaaga aacttggata tcccaagacc
     5701 aagctttgca aacttaaaca acctaattgc tcaagtggta tcatctgtta cagcatcatt
     5761 gagattcgac ggttcattaa atgtagattt gaacgaattt caaaccaatt tggttccata
     5821 tccaagaatt catttcccct tagtttcata ttctccagtc ttatccaaat caaaggcatt
     5881 ccatgagtcc aactctgtgt cagaaattac aaacgcttgt tttgaacctg gtaaccagat
     5941 ggtcaagtgt gatccaagag atggtaaata catggctact tgtctgttat acaggggtga
     6001 tgtggtaaca agagatgttc aaagagctgt cgagcaggtg aaaaacaaga agaccgtcca
     6061 attggttgat tggtgtccaa ctggtttcaa gatcggtatt tgctacgaac ctccaactgc
     6121 cacaccaaac tcacaattgg ccactgtgga tagggccgtc tgtatgttgt caaataccac
     6181 atccattgct gaggcttgga agagaatcga tagaaaattc gatttaatgt atgccaaacg
     6241 tgctttcgtc cactggtatg tcggtgaagg tatggaagaa ggtgaattca ccgaagctag
     6301 agaagatttg gctgctttag aaagagatta catcgaagtg ggtgccgact catacgctga
     6361 ggaagaggaa ttttaaggtt cactctcgcc cccaacctcc ttatcctttc tatatttcaa
     6421 gtatattgta aaaaaaaaaa ttccccctac tgttatatct ctttggtgat atcttatcta
     6481 taatctactt attatatttc tctaatatct atgtacaaaa aataaaaaaa aaaaccattc
     6541 tccttctcta acctgcattt gatgaaagct tagtaagtct catcgtagtt gatgggccaa
     6601 agacatttgt acttgtttca tcagattctt acatcaccca tttccatgat tatttcacgg
     6661 atttcattag taattgcatt tttgtatccc tagttccttt tctcccgcct tgccgtcgaa
     6721 ttgaaaaaaa aaatggaaat gaggacatct tccattgata tccaggacaa agcaagagta
     6781 gaagtaacta ttagcaagga gaattccaaa aatagtgaac ttcaaggtaa gcagatctat
     6841 agtttcaata tctgattttc tgcttttcaa aacttaaaat tcattagaag gtaaaacaag
     6901 aacccgtaaa attaaagtta ccgatattat caggtttttc accccatgtc tactatccca
     6961 tttagaaaga actatgtgtt caaaaactgg gccggtcgac ctgcagcgta cgaagcttca
     7021 gctggcggcc gcgttctata gtgtcaccta aatcgtatgt gtatgataca taaggttatg
     7081 tattaattgt agccgcgttc taacgacaat atgtccatat ggtgcactct cagtacaatc
     7141 tgctctgatg ccgcatagtt aagccagccc cgacacccgc c
//
