LOCUS       sequence-80537-e         408 bp    DNA     linear   UNA 15-DEC-2025
DEFINITION  Encodes module 2 with amino acids 12N-16Q for recognition of nt 7U.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      natural DNA sequence
  ORGANISM  unspecified
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Abil Z, Denard CA, Zhao H
  TITLE     Modular assembly of designer PUF proteins for specific 
            post-transcriptional regulation of endogenous RNA.
  JOURNAL   J Biol Eng. 2014 Mar 1;8(1):7.
  PUBMED    24581042
REFERENCE   2  (bases 1 to 408)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Dec 15, 2025 from SnapGene Server 8.0.1
            https://www.snapgene.com
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "J Biol 
            Eng."; date: "2014-03-1"; volume: "8(1)"; pages: "7"
COMMENT     Sequence Label: pChlr-2NQ
FEATURES             Location/Qualifiers
     source          1..408
                     /mol_type="genomic DNA"
                     /organism="unspecified"
     primer_bind     complement(146..162)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     primer_bind     complement(146..162)
                     /label=M13 Reverse
                     /note="In lacZ gene. Also called M13-rev"
     primer_bind     complement(159..181)
                     /label=M13/pUC Reverse
                     /note="In lacZ gene"
     protein_bind    170..186
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(join(194..200,201..218,219..224))
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    239..260
                     /label=CAP binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding activates transcription in the presence 
                     of cAMP."
     primer_bind     complement(377..394)
                     /label=L4440
                     /note="L4440 vector, forward primer"
ORIGIN
        1 ggtctcacca ggctgcctac caactcatgg tggatgtgtt tggtaattac gtcattcaga
       61 agttctttga atttggcagt cttgaacaga agctggcttt ggcagaacgg attcgaggta
      121 gagacccaag cttggcgtaa tcatggtcat agctgtttcc tgtgtgaaat tgttatccgc
      181 tcacaattcc acacaacata cgagccggaa gcataaagtg taaagcctgg ggtgcctaat
      241 gagtgagcta actcacatta attgcgttgc gctcactgcc cgctttccag tcgggaaacc
      301 tgtcgtgcca gctgcattaa tgaatcggcc aacgcgcggg gagaggcggt ttgcgtattg
      361 ggcgctcttc cgcttcctcg ctcactgact cgctgcgctc ggtcgttc
//
