pUC19BAblue-Ki_gcd1
(Plasmid
#246236)
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PurposeKomagataeibacter intermedius NEDO-01 gcd1 gene knockout plasmid based on pUC19, containing E. coli codBA gene for counter selection and Streptomyces bpsA and pptA genes for blue-white selection.
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Depositing Lab
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Depositing OrganizationHokkaido University
Located in Japan -
Sequence Information
Ordering
| Item | Catalog # | Description | Quantity | Price (USD) | |
|---|---|---|---|---|---|
| Plasmid | 246236 | Standard format: Plasmid sent in bacteria as agar stab | 1 | $94 | |
Backbone
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Vector backbonepUC19
Growth in Bacteria
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Bacterial Resistance(s)Ampicillin, 100 μg/mL
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Growth Temperature37°C
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Growth Strain(s)DH5alpha
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Copy numberUnknown
Gene/Insert 1
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Gene/Insert nameCytosine permease
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Alt namecodB
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SpeciesE. coli BL21 (TaKaRa)
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Insert Size (bp)1260
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GenBank IDCP010816.1
- Promoter J23104
Cloning Information for Gene/Insert 1
- Cloning method Other
- 5′ sequencing primer gtgtcgcaagataacaactttagccag
- 3′ sequencing primer tcaacgtttgtaatcgatggcttctg
- (Common Sequencing Primers)
Gene/Insert 2
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Gene/Insert nameCytosine deaminase
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Alt namecodA
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SpeciesE. coli BL21 (TaKaRa)
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Insert Size (bp)1289
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MutationSee depositor comments below.
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GenBank IDCP010816.1
- Promoter J23104
Cloning Information for Gene/Insert 2
- Cloning method Other
- 5′ sequencing primer gtgtcgcaagataacaactttagccag
- 3′ sequencing primer tcaacgtttgtaatcgatggcttctg
- (Common Sequencing Primers)
Gene/Insert 3
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Gene/Insert nameIndigoidine synthase
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Alt namebpsA
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SpeciesStreptomyces lavendulae subsp. lavendulae NBRC 12340
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Insert Size (bp)3841
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MutationSee depositor comments below.
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GenBank IDAB240063
- Promoter Trc promoter
Cloning Information for Gene/Insert 3
- Cloning method Other
- 5′ sequencing primer ggatccACGGAGGAGGCAGAATTCatgactcttcaggagaccagcg
- 3′ sequencing primer tcctctgttctagattcactcgccgagcaggtagc
- (Common Sequencing Primers)
Gene/Insert 4
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Gene/Insert name4'-phosphopantetheinyl transferase
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Alt namepptA
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SpeciesStreptomyces mobaraensis NBRC 13819
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Insert Size (bp)738
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GenBank IDPRJDB448
- Promoter Trc promoter
Cloning Information for Gene/Insert 4
- Cloning method Other
- 5′ sequencing primer ATCTAGAACAGAGGAAGCAGAATTCatcgccgccctcctgc
- 3′ sequencing primer ttacgggacggcggtcc
- (Common Sequencing Primers)
Resource Information
Terms and Licenses
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Academic/Nonprofit Terms
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Industry Terms
- Not Available to Industry
Trademarks:
- Zeocin® is an InvivoGen trademark.
Depositor Comments
Please note: This plasmid contains a Q419stop mutation in codA and a Q335P mutation in bpsA. These mutations are not known to impact plasmid function.
These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.
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For your Materials & Methods section:
pUC19BAblue-Ki_gcd1 was a gift from Kenji Tajima (Addgene plasmid # 246236 ; http://n2t.net/addgene:246236 ; RRID:Addgene_246236) -
For your References section:
Enhanced production of nanofibrillated bacterial cellulose through regulation of gluconic acid metabolism. Takahama R, Takayama G, Suginaka M, Ishido Y, Nagai S, Nagai K, Uenishi M, Tajima K. Appl Environ Microbiol. 2026 Oct 7:e0170725. doi: 10.1128/aem.01707-25. 10.1128/aem.01707-25 PubMed 42841632