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pPD140 ZF43x12-Spaced-Mid_EYFP

Plasmid

#138889

Purpose

EYFP reporter vector for the ZF43x12-Spaced-Mid promoter

Depositor

Joshua Leonard

Article

Donahue et al Nat Commun. 2020 Feb 7;11(1):779. doi: 1

Insert

ZF43x12-Spaced-Mid

Use

Synthetic Biology

Expression

Mammalian

Promoter

ZF43x12-Spaced-Mid

Available Since

Jan. 31, 2021

Availability

Academic Institutions and Nonprofits only

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pPD137 ZF43x8-Spaced-Mid_EYFP

Plasmid

#138887

Purpose

EYFP reporter vector for the ZF43x8-Spaced-Mid promoter

Depositor

Joshua Leonard

Article

Donahue et al Nat Commun. 2020 Feb 7;11(1):779. doi: 1

Insert

ZF43x8-Spaced-Mid

Use

Synthetic Biology

Expression

Mammalian

Promoter

ZF43x8-Spaced-Mid

Available Since

Jan. 31, 2021

Availability

Academic Institutions and Nonprofits only

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pPD135 ZF43x4-Spaced-Mid_EYFP

Plasmid

#138885

Purpose

EYFP reporter vector for the ZF43x4-Spaced-Mid promoter

Depositor

Joshua Leonard

Article

Donahue et al Nat Commun. 2020 Feb 7;11(1):779. doi: 1

Insert

ZF43x4-Spaced-Mid

Use

Synthetic Biology

Expression

Mammalian

Promoter

ZF43x4-Spaced-Mid

Available Since

Jan. 31, 2021

Availability

Academic Institutions and Nonprofits only

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pPD134 ZF43x2-Spaced-Mid_EYFP

Plasmid

#138884

Purpose

EYFP reporter vector for the ZF43x2-Spaced-Mid promoter

Depositor

Joshua Leonard

Article

Donahue et al Nat Commun. 2020 Feb 7;11(1):779. doi: 1

Insert

ZF43x2-Spaced-Mid

Use

Synthetic Biology

Expression

Mammalian

Promoter

ZF43x2-Spaced-Mid

Available Since

Jan. 31, 2021

Availability

Academic Institutions and Nonprofits only

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pGEM_HcBOP1ainsitu

Plasmid

#136529

Purpose

Template for generating in situ hybridization probe

Depositor

Junko Kyozuka

Article

Toriba et al Curr Biol. 2020 Feb 3;30(3):509-516.e3.

Insert

Houttuynia cordata BLADE-ON-PETIOLE homolog1a

Use

Cloning vector

Available Since

Feb. 14, 2020

Availability

Academic Institutions and Nonprofits only

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pGEM_ZmaBOP1binsitu

Plasmid

#136531

Purpose

Template for generating in situ hybridization probe

Depositor

Junko Kyozuka

Article

Toriba et al Curr Biol. 2020 Feb 3;30(3):509-516.e3.

Insert

Zoysia matrella BLADE-ON-PETIOLE homolog1b

Use

Cloning vector

Available Since

Feb. 14, 2020

Availability

Academic Institutions and Nonprofits only

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pGEM_ZmaBOP2binsitu

Plasmid

#136532

Purpose

Template for generating in situ hybridization probe

Depositor

Junko Kyozuka

Article

Toriba et al Curr Biol. 2020 Feb 3;30(3):509-516.e3.

Insert

Zoysia matrella BLADE-ON-PETIOLE homolog2b

Use

Cloning vector

Available Since

Feb. 14, 2020

Availability

Academic Institutions and Nonprofits only

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pGEM_HcBOP1binsitu

Plasmid

#136530

Purpose

Template for generating in situ hybridization probe

Depositor

Junko Kyozuka

Article

Toriba et al Curr Biol. 2020 Feb 3;30(3):509-516.e3.

Insert

Houttuynia cordata BLADE-ON-PETIOLE homolog1b

Use

Cloning vector

Available Since

Feb. 10, 2020

Availability

Academic Institutions and Nonprofits only

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pTGC-U6.3

Plasmid

#112810

Purpose

PCR template vector for amplifying gRNAcore-pU6.2 promoter fragment

Depositor

Chun Han

Article

Poe et al Genetics. 2018 Nov 30. pii: genetics.118

Insert

U6:3-gRNAcore

Expression

Bacterial

Available Since

Dec. 4, 2018

Availability

Academic Institutions and Nonprofits only

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pUC19 gene 60 thru gap + Cys

Plasmid

#49161

Purpose

Template for generating gene 60 mRNA truncated two codons after coding gap + Cys

Depositor

Nils Walter

Article

Todd et al RNA. 2013 May;19(5):685-700. doi: 10.126

Insert

Bacteriophage T4 gene 60

Mutation

gene 60 mRNA truncated two codons after coding ga…

Promoter

T7

Available Since

Feb. 3, 2015

Availability

Academic Institutions and Nonprofits only

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pBXMCS-2 Pconstitutive-sgRNA(Sth3)_gcrA2

Plasmid

#133341

Purpose

for constitutive expression of a single guide RNA from Streptococcus thermophilus #3 with a seed region that targets gcrA gene's promoter on the template strand in Caulobacter crescentus

Depositor

Michael Laub

Article

Guzzo et al mBio. 2020 Jan 14;11(1):e02415-19. doi:

Insert

sgRNA_gcrA

Use

CRISPR

Promoter

constitutive

Availability

Academic Institutions and Nonprofits only

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SpCas9-CBE6d-V106W

Plasmid

#215827

Purpose

Express CBE6d V106W (with SpCas9) in mammalian cells

Depositor

David Liu

Article

Zhang et al Nat Commun. 2024 Feb 24;15(1):1697. doi:

Insert

CBE6d V106W-SpCas9-2xUGI (cas9 )

Use

In vitro transcription template

Available Since

March 8, 2024

Availability

Academic Institutions and Nonprofits only

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p46Cpf1-OP2

Plasmid

#98592

Purpose

Produces lambda Red and Cpf1 for recombination and selection. The plasmid is combined with a donor plasmid (with crRNA and template) for rapid genome editing in E.coli.

Depositor

Qiong Wu

Article

Ao et al Front Microbiol. 2018 Oct 9;9:2307. doi:

Insert

FnCpf1

Use

CRISPR

Expression

Bacterial

Mutation

Codon optimized for E. coli

Promoter

araBAD

Available Since

Feb. 7, 2018

Availability

Academic Institutions and Nonprofits only

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SpCas9-CBE6c-V106W

Plasmid

#215826

Purpose

Express CBE6c V106W (with SpCas9) in mammalian cells

Depositor

David Liu

Article

Zhang et al Nat Commun. 2024 Feb 24;15(1):1697. doi:

Insert

CBE6c V106W-SpCas9-2xUGI (cas9 )

Use

In vitro transcription template

Available Since

March 8, 2024

Availability

Academic Institutions and Nonprofits only

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SpCas9-CBE6b-V106W

Plasmid

#215825

Purpose

Express CBE6b V106W (with SpCas9) in mammalian cells

Depositor

David Liu

Article

Zhang et al Nat Commun. 2024 Feb 24;15(1):1697. doi:

Insert

CBE6b V106W-SpCas9-2xUGI (cas9 )

Use

In vitro transcription template

Available Since

March 8, 2024

Availability

Academic Institutions and Nonprofits only

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pAAV MCS mCherry-KASH

Plasmid

#139654

Purpose

Cloning template for AAV-based ORANGE knock-in constructs

Depositor

Harold MacGillavry

Article

Willems et al PLoS Biol. 2020 Apr 10;18(4):e3000665. d

Type

Empty backbone

Use

AAV

Expression

Mammalian

Promoter

U6

Available Since

June 8, 2020

Availability

Academic Institutions and Nonprofits only

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pFA6a-FLAG-APEX2-NES-HIS3

Plasmid

#229230

Purpose

Template plasmid for the endogenous tagging with FLAG-APEX2-NAS in yeast

Depositor

Fulvio Reggiori

Article

Filali-Mouncef et al Autophagy. 2024 Oct;20(10):2323-2337. do

Type

Empty backbone

Expression

Yeast

Available Since

March 11, 2025

Availability

Academic Institutions and Nonprofits only

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pNluc-hbb

Plasmid

#239753

Purpose

Template for in vitro transcription of nanoluciferase flanked by the human haemoglobin beta 5' and 3' UTRs.

Depositor

Catherine Jopling

Article

Smart et al Mol Ther Nucleic Acids. 2025 Jun 24;36(3

Insert

Nanoluciferase flanked by human haemoglobin beta 5' and 3' UTRs

Use

Luciferase

Promoter

T7 (included as part of insert)

Available Since

July 7, 2025

Availability

Academic Institutions and Nonprofits only

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pH2rU3_ForInd_mCherry_CMV_ZsGT2APurR

Plasmid

#204579

Purpose

lentivirus backbone cloning vector and template for barcoded non-neutralizable standard production

Depositor

Jesse Bloom

Article

Dadonaite et al Cell. 2023 Mar 16;186(6):1263-1278.e20.

Insert

mCherry

Use

Lentiviral

Promoter

TRE3G

Available Since

Aug. 16, 2023

Availability

Academic Institutions and Nonprofits only

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pComb3XTT

Plasmid

#63891

Purpose

Backbone of pComb3X containing TT Fab (light and heavy chains) against tetanus toxin, used as phage display/expression control and PCR template for human antibody constant regions (kappa and CH1)

Depositor

Carlos Barbas

Article

Andris-Widhopf et al J Immunol Methods. 2000 Aug 28;242(1-2):

Insert

TT Fab

Use

Phage display

Tags

6xHis, HA tag, and geneIII

Expression

Bacterial

Promoter

lacZ

Available Since

July 21, 2015

Availability

Academic Institutions and Nonprofits only

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