-
PurposeN-terminal component of OptoShroom3 optogenetic tool. Binds to apical junctions. pDONRp5-p2 plasmid.
-
Depositing Lab
-
Depositing OrganizationEuropean Molecular Biology Laboratory (EMBL), Barcelona
Located in Spain -
Sequence Information
Ordering
| Item | Catalog # | Description | Quantity | Price (USD) | |
|---|---|---|---|---|---|
| Plasmid | 170976 | Standard format: Plasmid sent in bacteria as agar stab | 1 | $94 | |
| DNA | 170976-D50 | 50 μg of DNA in Tris buffer | $495 | ||
| DNA | 170976-D100 | 100 μg of DNA in Tris buffer | $585 | ||
Backbone
-
Vector backbonepDONR221 p5-p2
-
Backbone manufacturerInvitrogen
- Backbone size w/o insert (bp) 2553
- Total vector size (bp) 8070
-
Vector typeGateway Cloning
Growth in Bacteria
-
Bacterial Resistance(s)Kanamycin, 50 μg/mL
-
Growth Temperature37°C
-
Growth Strain(s)DH5alpha
-
Copy numberLow Copy
Gene/Insert
-
Gene/Insert nameNShroom3
-
SpeciesM. musculus (mouse)
-
Insert Size (bp)4161
-
MutationFrom isoform 2, deleted amino acids 1389 - 1805, mutations: G1226E, E1227K, P1242L, R1276L
-
GenBank IDXP_006535031.1
-
Entrez GeneShroom3 (a.k.a. AL022960, D5Ertd287, D5Ertd287e, Sh, Shr, Shrm, Shrm3)
-
Tags
/ Fusion Proteins
- eGFP (N terminal on insert)
- iLID (C terminal on insert)
Cloning Information
- Cloning method Gateway Cloning
- 5′ sequencing primer M13 fwd: GTAAAACGACGGCCAGT
- 3′ sequencing primer M13 rev: GTCATAGCTGTTTCCTG
- (Common Sequencing Primers)
Resource Information
-
A portion of this plasmid was derived from a plasmid made byOriginal mShroom3 sequence was a gift from T. Nishimura, from M.Takeichi lab. iLID sequence was a gift from H. Janovjak lab.
Terms and Licenses
-
Academic/Nonprofit Terms
-
Industry Terms
- Not Available to Industry
Trademarks:
- Zeocin® is an InvivoGen trademark.
Depositor Comments
Please visit https://doi.org/10.1101/2021.04.20.440475 for bioRxiv preprint.
DNA (Catalog # 170976-D50)
Purpose
Ready-to-use, high-purity DNA prep. DNA aliquots are suitable for use in mammalian cell transfections and other molecular biology applications.
Delivery
- Amount 50 μg
- Concentration 1 μg/μL
- Pricing $495 USD
- Storage 4 ℃ (short-term) or -20 ℃ (long-term)
Terms and Licenses
-
Academic/Nonprofit Terms
-
Industry Terms
- Not Available to Industry
Quality Control
Every DNA prep is verified by next-generation sequencing, confirming plasmid identity, sequence integrity, and absence of DNA contaminants. Concentration is confirmed to be within ±2.5% of the stated concentration.
Our production process has been validated to consistently yield endotoxin levels below 1.0 EU/μg. Individual lots are not tested for endotoxin.
DNA (Catalog # 170976-D100)
Purpose
Ready-to-use, high-purity DNA prep. DNA aliquots are suitable for use in mammalian cell transfections and other molecular biology applications.
Delivery
- Amount 100 μg
- Concentration 1 μg/μL
- Pricing $585 USD
- Storage 4 ℃ (short-term) or -20 ℃ (long-term)
Terms and Licenses
-
Academic/Nonprofit Terms
-
Industry Terms
- Not Available to Industry
Quality Control
Every DNA prep is verified by next-generation sequencing, confirming plasmid identity, sequence integrity, and absence of DNA contaminants. Concentration is confirmed to be within ±2.5% of the stated concentration.
Our production process has been validated to consistently yield endotoxin levels below 1.0 EU/μg. Individual lots are not tested for endotoxin.
These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.
-
For your Materials & Methods section:
pDONRp5-p2 GFP-NShroom3-iLID was a gift from Miki Ebisuya (Addgene plasmid # 170976 ; http://n2t.net/addgene:170976 ; RRID:Addgene_170976) -
For your References section:
Optogenetic control of apical constriction induces synthetic morphogenesis in mammalian tissues. Martinez-Ara G, Taberner N, Takayama M, Sandaltzopoulou E, Villava CE, Bosch-Padros M, Takata N, Trepat X, Eiraku M, Ebisuya M. Nat Commun. 2022 Sep 14;13(1):5400. doi: 10.1038/s41467-022-33115-0. 10.1038/s41467-022-33115-0 PubMed 36104355