phnRNP-DL-EGFP_ECFP-NMD (pc3351)
(Plasmid
#235783)
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PurposeFluorescence splicing reporter using EGFP expression regulated by the NMD (non-sense mediated decay) system
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Depositing Lab
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Depositing OrganizationTechnische Universitaet Darmstadt
Located in Germany -
Sequence Information
Ordering
| Item | Catalog # | Description | Quantity | Price (USD) | |
|---|---|---|---|---|---|
| Plasmid | 235783 | Standard format: Plasmid sent in bacteria as agar stab | 1 | $94 | |
Backbone
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Vector backbonepWHE200 (pc3335)
- Total vector size (bp) 7460
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Modifications to backboneTo generate the splicing reporter vector phnRNP-DL-EGFP_ECFP(pc3351), the firefly luciferase sequence was cut from the vector pWHE200 (pc3335) using BamHI and NotI restriction enzymes. The ECFP reverse complement CDS was amplified from pc0911 using the following primers: forward 5’-gagtactgcagttacttgtacagc-3,“ reverse 5”-gagtagaattcatggtgagcaagg-3.’ The Renilla luciferase sequence was then replaced using PstI and EcoRI restriction.
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Vector typeMammalian Expression, Bacterial Expression
Growth in Bacteria
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Bacterial Resistance(s)Ampicillin, 100 μg/mL
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Growth Temperature37°C
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Growth Strain(s)DH5alpha
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Copy numberUnknown
Gene/Insert
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Gene/Insert nameECFP
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SpeciesAequorea victoria
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Insert Size (bp)717
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GenBank ID
- Promoter CMV
Cloning Information
- Cloning method Restriction Enzyme
- 5′ cloning site PstI (unknown if destroyed)
- 3′ cloning site EcoRI (unknown if destroyed)
- 5′ sequencing primer gagtagaattcatggtgagcaagg
- (Common Sequencing Primers)
Resource Information
Terms and Licenses
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Academic/Nonprofit Terms
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Industry Terms
- Not Available to Industry
Trademarks:
- Zeocin® is an InvivoGen trademark.
Depositor Comments
Please visit https://doi.org/10.1101/2025.03.07.641893 for bioRxiv preprint.
These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.
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For your Materials & Methods section:
phnRNP-DL-EGFP_ECFP-NMD (pc3351) was a gift from Cristina Cardoso (Addgene plasmid # 235783 ; http://n2t.net/addgene:235783 ; RRID:Addgene_235783) -
For your References section:
TET dioxygenases localize at splicing speckles and promote RNA splicing. Hastert FD, Weber J, Bauer C, Zhadan A, Singh DND, Dix TC, Arnold R, Bessonov S, Soller M, Leonhardt H, Cardoso MC, Arroyo M. Nucleus. 2025 Dec;16(1):2536902. doi: 10.1080/19491034.2025.2536902. Epub 2025 Jul 27. 10.1080/19491034.2025.2536902 PubMed 40717330