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Depositing Lab
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Depositing OrganizationUniversity of Basel
Located in Switzerland -
Publication
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Citations
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Sequence Information
Ordering
| Item | Catalog # | Description | Quantity | Price (USD) | |
|---|---|---|---|---|---|
| Plasmid | 39977 | Standard format: Plasmid sent in bacteria as agar stab | 1 | $94 | |
| DNA | 39977-D50 | 50 μg of DNA in Tris buffer | $495 | ||
| DNA | 39977-D100 | 100 μg of DNA in Tris buffer | $585 | ||
Backbone
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Vector backbonepRC/CMV AC7 vector, a derivative of the pRC/CMV vector
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Backbone manufacturerInvitrogen
- Backbone size w/o insert (bp) 5500
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Vector typeMammalian Expression
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Selectable markersNeomycin (select with G418)
Growth in Bacteria
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Bacterial Resistance(s)Ampicillin, 100 μg/mL
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Growth Temperature37°C
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Growth Strain(s)DH5alpha
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Copy numberHigh Copy
Gene/Insert
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Gene/Insert nameTrkA
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Alt nametrk
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Alt nameNtrk1
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SpeciesR. norvegicus (rat)
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Insert Size (bp)2500
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Mutationendogenous signal sequence was replaced with BM40 and HA tag
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GenBank IDNM_021589.1
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Entrez GeneNtrk1 (a.k.a. Trk)
- Promoter CMV
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Tags
/ Fusion Proteins
- BM40 signal sequence (N terminal on insert)
- HA (N terminal on insert)
Cloning Information
- Cloning method Restriction Enzyme
- 5′ cloning site HindIII (pmeI added) (unknown if destroyed)
- 3′ cloning site Not I (internal NotI site was silently mutated) (unknown if destroyed)
- 5′ sequencing primer CMV-F
- 3′ sequencing primer SP6
- (Common Sequencing Primers)
Terms and Licenses
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Academic/Nonprofit Terms
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Industry Terms
- Not Available to Industry
Trademarks:
- Zeocin® is an InvivoGen trademark.
Depositor Comments
cloned in the pRC/CMV AC7 vector, a derivative of the pRC/CMV vector (Invitrogen), which contains the BM40 signal peptide
Please note that the endogenous signal sequence of TrkA was replaced by the BM40 signal peptide sequence (MRAWIFFLLCLAGRALAAPLA). When compared to GenBank ID NP_067600.1, the TrkA protein sequence starts at amino acid #30
DNA (Catalog # 39977-D50)
Purpose
Ready-to-use, high-purity DNA prep. DNA aliquots are suitable for use in mammalian cell transfections and other molecular biology applications.
Delivery
- Amount 50 μg
- Concentration 1 μg/μL
- Pricing $495 USD
- Storage 4 ℃ (short-term) or -20 ℃ (long-term)
Terms and Licenses
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Academic/Nonprofit Terms
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Industry Terms
- Not Available to Industry
Quality Control
Every DNA prep is verified by next-generation sequencing, confirming plasmid identity, sequence integrity, and absence of DNA contaminants. Concentration is confirmed to be within ±2.5% of the stated concentration.
Our production process has been validated to consistently yield endotoxin levels below 1.0 EU/μg. Individual lots are not tested for endotoxin.
DNA (Catalog # 39977-D100)
Purpose
Ready-to-use, high-purity DNA prep. DNA aliquots are suitable for use in mammalian cell transfections and other molecular biology applications.
Delivery
- Amount 100 μg
- Concentration 1 μg/μL
- Pricing $585 USD
- Storage 4 ℃ (short-term) or -20 ℃ (long-term)
Terms and Licenses
-
Academic/Nonprofit Terms
-
Industry Terms
- Not Available to Industry
Quality Control
Every DNA prep is verified by next-generation sequencing, confirming plasmid identity, sequence integrity, and absence of DNA contaminants. Concentration is confirmed to be within ±2.5% of the stated concentration.
Our production process has been validated to consistently yield endotoxin levels below 1.0 EU/μg. Individual lots are not tested for endotoxin.
These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.
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For your Materials & Methods section:
pRc/CMV HA TrkA was a gift from Yves-Alain Barde (Addgene plasmid # 39977 ; http://n2t.net/addgene:39977 ; RRID:Addgene_39977) -
For your References section:
Biochemical and functional interactions between the neurotrophin receptors trk and p75NTR. Bibel M, Hoppe E, Barde YA. EMBO J. 1999 Feb 1;18(3):616-22. 10.1093/emboj/18.3.616 PubMed 9927421