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A Suite of New Strain Construction Vectors for Gene Expression Knockdown in Budding Yeast.
Shively CA, Dong F, Mitra RD
ACS Synth Biol. 2023 Jan 17. doi: 10.1021/acssynbio.2c00547.
PubMed Article

A subset of these plasmids is included in the CEAS (C-SWAT for Essential Allele Strains) Kit.

Plasmids from Article

ID Plasmid Purpose
182509C-SWAT 6FLAGC-SWAT compatible vector for C-terminal tagging with 6 FLAG
182510C-SWAT GFPC-SWAT compatible vector for C-terminal tagging with GFP
182511C-SWAT GFP DAmPC-SWAT compatible vector for C-terminal tagging with GFP DAmP. GFP is immediately followed by the Hygromycin B (Hph) resistance cassette.
182512C-SWAT GFP CL1C-SWAT compatible vector for C-terminal tagging with GFP followed by the CL1 degron for constitutive gene expression knockdown.
182513C-SWAT GFP CL1 DAmPC-SWAT compatible vector for C-terminal tagging with GFP CL1 followed by the DAmP cassette. The stop codon after the CL1 degron is immediately followed by the Hygromycin B (Hph) resistance cassette.
182514C-SWAT AID*-GFP osTIR1C-SWAT compatible vector for C-terminal tagging with AID*-GFP for auxin inducible gene knockdown. osTIR1 is flanked by SIR4 homology arms for integration.
182515C-SWAT AID*-6FLAG osTIR1C-SWAT compatible vector for C-terminal tagging with AID*-6FLAG for auxin induced gene knockdown. osTIR1 is flanked by SIR4 homology arms for integration into the genome.
182516C-SWAT IAA17-6FLAGC-SWAT compatible vector for C-terminal tagging with IAA17 (Auxin-Inducible Degron) and 6FLAG. ARF16(PB1)-P2A-osTIR1 has SIR4 homology arms for genome integration.
182517C-SWAT IAA17-3HAC-SWAT compatible vector for C-terminal tagging with IAA17 (Auxin inducible degron) and 3HA. ARF16(PB1)-P2A-osTIR1 with SIR4 homology arms for genome integration.
182518C-SWAT IAA17-3MYCC-SWAT compatible vector for C-terminal tagging with IAA17 (Auxin inducible degron) and 3MYC. ARF16(PB1)-P2A-osTIR1 with SIR4 homology arms for genome integration.
182519Gal1/10p CAS9 Gal1/10p I-SceIGalactose-Induced Expression vector for Cas9 and I-SceI.
182520SIR4 gRNA HISExpression vector for gRNA directed against SIR4 ORF.
182521CAN1 gRNA HISExpression vector for gRNA directed against CAN1 ORF.
182522C-SWAT IAA17-6FLAGC-SWAT compatible vector for C-terminal tagging with IAA17 (Auxin Inducible Degron) and 6FLAG. ARF16(PB1)-P2A-osTIR1 with CAN1 homology arms for genome integration.
182523C-SWAT SMAShC-SWAT compatible vector for C-terminal tagging with SMASh Degron. (Protease Cleavage Site: DEMEECSKHL).
182524C-SWAT 3MYC SMAShC-SWAT compatible vector for C-terminal tagging with 3MYC followed by SMASh degron. (Protease Cleavage Site: DEMEECSKHL).
182525C-SWAT 3MYC SMAShC-SWAT compatible vector for C-terminal tagging with 3MYC followed by SMASh degron. (Protease Cleavage Site: DEMEECSQHL).
182526NAT-TET-OFF -MET - 3xHADoxycycline-induced transcriptional regulation and 3xHA N-terminal tagging.
182527NAT-TET-OFF -LEU- 4xFLAGDoxycycline-induced transcriptional regulation and Ubiquitin - LEU - 4xFLAG N-terminal tagging. Ubiquitin is cleaved off, resulting in an unstable protein with an N-terminal leucine.
193314NAT-TET-OFF – ubiquitin – LEU – 4MYCDoxycycline-induced transcriptional regulation and Ubiquitin - LEU - 4xMYC N-terminal tagging. Ubiquitin is cleaved off, resulting in an unstable protein with an N-terminal leucine.
193315HYG-TET-OFF – ubiquitin – LEU – 4FLAGDoxycycline-induced transcriptional regulation and Ubiquitin - LEU - 4xFLAG N-terminal tagging. Ubiquitin is cleaved off, resulting in an unstable protein with an N-terminal leucine.
193316HYG-TET-OFF – ubiquitin – LEU – 4MYCDoxycycline-induced transcriptional regulation and Ubiquitin - LEU - 4xMYC N-terminal tagging. Ubiquitin is cleaved off, resulting in an unstable protein with an N-terminal leucine.
193317KAN(G418)-TET-OFF – ubiquitin – LEU – 4FLAGDoxycycline-induced transcriptional regulation and Ubiquitin - LEU - 4xFLAG N-terminal tagging. Ubiquitin is cleaved off, resulting in an unstable protein with an N-terminal leucine.
193318KAN(G418)-TET-OFF – ubiquitin – LEU – 4MYCDoxycycline-induced transcriptional regulation and Ubiquitin - LEU - 4xMYC N-terminal tagging. Ubiquitin is cleaved off, resulting in an unstable protein with an N-terminal leucine.
193319C-SWAT IAA17C-SWAT compatible vector for C-terminal tagging with IAA17 (Auxin-Inducible Degron). ARF16(PB1)-P2A-osTIR1 has SIR4 homology arms for genome integration.
193320C-SWAT AID*-6MYC osTIR1C-SWAT compatible vector for C-terminal tagging with AID*-6MYC for auxin induced gene knockdown. osTIR1 is flanked by SIR4 homology arms for integration into the genome.
193321C-SWAT Compatible pAIDA2(6FLAG)C-SWAT compatible vector for C-terminal tagging with TAP-AID*-6FLAG. osTIR1 is carried downstream of the C-terminal tag.
193322C-SWAT IAA17-6FLAG (no NLS)C-SWAT compatible vector for C-terminal tagging with IAA17 (Auxin-Inducible Degron) and 6FLAG. ARF16(PB1)-P2A-osTIR1 has SIR4 homology arms for genome integration and does not have NLS tags..

Antibodies from Article