We narrowed to 93 results for: phage
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TypeBlog Post...transcriptase domain for optimization. They developed phage-assisted evolution strategies to evolve more effective... Tolar, J., Osborn, M. J., & Liu, D. R. (2023). Phage-assisted evolution and protein engineering yield...
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Progress Towards a PAM-Free CRISPR
TypeBlog Post...2018). xCas9 was generated by the Liu lab through phage-assisted evolution, specifically with the goal of... -
Plasmid-based Recombinant Monoclonal Antibodies: What They Are and Why You Should Be Excited About Them
TypeBlog Post...antibodies. The selection process is often performed via phage display, yeast display, ribosome display, or mammalian... -
Plasmids 101: 5 factors to help you choose the right cloning method
TypeBlog Post...method, developed by Invitrogen and based on lambda phage integration sequences, relies on site-specific recombination... -
Hot Plasmids and Viral Preps - January 2021
TypeBlog Post...hypercompact genome editor from the Biggiephage clade of huge phages. In this article, they investigated...as in human and plant cells. Casɸ from Biggiephage can eliminate competing mobile genetic elements... -
Reaching out to China: Canton Nucleic Acids Forum (CNAF) 2015
TypeBlog Post... hospitals. Dr. Qimron proposes using bacterial phage vectors with CRISPR/cas9 sensitizing gene cassettes... -
CRISPR Plasmids - Bacteria
TypeCollection... activate programmed cell death or dormancy for phage-infected bacterial cells so as to limit the spread... -
28 Hot Plasmid Technologies from 2015
TypeBlog Post...by using 6-12 phage PP7 coat protein binding sites and 24 copies of the MS2 bacteriophage coat protein ...Synthetic Biology Center have deposited a set of 11 phage integrases which act irreversibly on their cognate.... These pairs are closely related to the lambda phage integrase system which is the basis for Gateway ...authors recently used computational protein design, phage display and high throughput binding assays, to engineer... -
5 Tips for Troubleshooting Viral Transductions
TypeBlog Post...Central PMCID: PMC3760253. 2. Rohwer, Forest. "Global phage diversity." Cell 113.2 (2003): 141. PubMed PMID:...more abundant are the Earth’s estimated 1031 bacteriophages (viruses that infect bacteria), many of which... -
Antibiotic Resistance: An Old Solution but a New Problem
TypeBlog Post...Antibiotic Resistance Genes Are Used in the Lab Probe Phage Genomes for Host Binding Proteins Learn How to Use...genes from one bacterium to another through bacteriophage (viruses that only infect bacterial cells), ... -
New CRISPR Tools: Cas7-11 and PASTE
TypeBlog Post... good at flipping. So the lab instead turned to phage serine integrases, where they saw 10-20% integration... -
CRISPR 101: Cytosine and Adenine Base Editors
TypeBlog Post...and specificity. In this first, the Liu lab used phage-assisted evolution selection systems to generate...Bauer, D. E., Doudna, J. A., & Liu, D. R. (2020). Phage-assisted evolution of an adenine base editor with... indel formation 1.5-2 fold, the team fused bacteriophage protein Gam to the N-terminus of BE4 (Komor ...Improved base excision repair inhibition and bacteriophage Mu Gam protein yields C:G-to-T:A base editors... -
Neurodegeneration Plasmid Collection
TypeCollection...Edward Fon 116364 pHAGE-ERBB4-K606N ERBB4 EF-1 alpha ALS Kenneth Scott 116365 pHAGE-ERBB4-S774G ERBB4 ...MacGillavry 131791 pHAGE-N-FLAG-HA-TBK1 TBK1 Flag, HA CMV ALS Alicia Pickrell 131792 pHAGE-TBK1-C-FLAG-HA ...ALS Claudia Kutter 175750 pHAGE-eGFP-OPTN OPTN ALS Wade Harper 175760 pHAGE-FLAG-APEX2-OPTN OPTN Flag ...Wade Harper 175762 pHAGE-eGFP-OPTN D474N OPTN GFP CMV ALS Wade Harper 175763 pHAGE-eGFP-OPTN S473A 513A...Wade Harper 175764 pHAGE-eGFP-OPTN S513A OPTN GFP CMV ALS Wade Harper 175765 pHAGE-eGFP-OPTN E50K OPTN...Ching Cheong 208866 pHAGE-FKBP-GFP-OPTN OPTN FKBP, GFP CMV ALS Sascha Martens 208867 pHAGE-FKBP-GFP-OPTN (...ERBB4 EF-1 alpha ALS Kenneth Scott 116736 pHAGE-ERBB4 ERBB4 EF-1 alpha ALS Kenneth Scott 117701 pmSod1-WT-... -
Lentivirus Plasmids
TypeCollection...tetracycline transactivator. Rudolf Jaenisch 131626 pHAGE-mt-mKeima 3rd Expression of mitochondrial mKeima... -
The Advances Behind The World's First Personalized CRISPR Treatment
TypeBlog Post...Bauer, D. E., Doudna, J. A., & Liu, D. R. (2020). Phage-assisted evolution of an adenine base editor with... -
Harnessing Bacterial Toxins for Allelic Exchange
TypeBlog Post...effector toxins, toxin-antitoxin type toxins, and phage holins. They hypothesized that genes that had evolved...which uses enzymes domesticated from the Lambda bacteriophage, is arguably the most widely and productively...allow replication only in hosts carrying the bacteriophage lambda pir protein. This allows conjugation ... -
Plasmids 101: Common Lab E. coli Strains
TypeBlog Post...hydroxamate uptake, iron uptake receptor mutation. T1/T5 Phage resistance gal Mutation in galactose metabolism... -
Cre-Lox and Other Site-Specific Recombinases
TypeCollection...derived from a Streptomyces phage, and Bxb1 integrase, from a mycobacteriophage, are serine SSRs that cleave...systems, like Cre-lox, derive from fungi or bacteriophages and are powerful genome engineering tools used...tyrosine recombinases derived from P1 E. coli bacteriophage and S. cerevisiae , respectively. Other tyrosine... -
Four Ways to Package Transgenes That Exceed the Size Limit of Adeno-associated Virus
TypeBlog Post... homology sequence derived from the filamentous phage F1 (Trapani et al., 2014). Drawbacks: The choice... -
CRISPR Guide
TypeCollection...control CRISPR activity. Acr proteins have evolved in phages and other mobile genetic elements to overcome the... edits. These proteins, like Cre recombinase or phage derived serine integrases, insert donor DNA at “... Tolar, J., Osborn, M. J., & Liu, D. R. (2023). Phage-assisted evolution and protein engineering yield...screens in E. coli identify essential genes and phage host factors. PLOS Genetics . 14 (11), e1007749...., Maxwell, K. L., & Davidson, A. R. (2013). Bacteriophage genes that inactivate the CRISPR/Cas bacterial..., J. (2017). Inhibition of CRISPR-Cas9 with Bacteriophage Proteins. Cell , 168 (1–2), 150-158.e10. PMID...Improved base excision repair inhibition and bacteriophage Mu Gam protein yields C:G-to-T:A base editors...