Tips for Using BLAST to Verify Plasmids
Type
Blog Post
...Aligning two nucleotide sequences is probably the fastest BLAST search to perform and will save you time ...Highly similar sequences (megablast)”, which is very fast and works best when the identity between your sequence... [Our QC process would be trouble-free and much faster if 95% of our results were always correct!]
Since...base pair from your results.
This option is not as fast as megablast, but can return longer alignments to...