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We narrowed to 93 results for: control gRNA

Showing: 41 - 60 of 93 results
  1. How to Deposit Your Plasmids with Addgene

    Type
    Blog Post
    Published
    Feb. 27, 2024, 2:15 p.m.
    ... Encodes gRNA/shRNA A plasmid with one or more gRNA or shRNA sequences cloned into it. gRNAs are used...initiate our MTA process and perform standard quality control but will not make the plasmids available until:...gene contained within your insert (or targeted by a gRNA/shRNA) and select the species that the gene or insert...Continue to Next Step". As part of our quality control process, we will sequence the full plasmid and ...received them and they will undergo our quality control process to verify your plasmids. Our friendly Addgene...
  2. X-CHIME: Context Dependent Germline Knockout in Immune Cells

    Type
    Blog Post
    Published
    Jan. 16, 2024, 6:13 p.m.
    ...stem cells with a lentiviral vector containing a gRNA. These transduced stem cells can be implanted in...Concept These systems were benchmarked on positive control genes in CD4+ and CD8+ T cells. To demonstrate ...: Validating Your Genome Edit How to Design Your gRNA for CRISPR Genome Editing CRISPR Cheat Sheat Resources...
  3. Plasmids 101: Screening Strategies Used in Plasmid Cloning

    Type
    Blog Post
    Published
    Sept. 15, 2020, 1:15 p.m.
    ... a look at All_in_one_CRISPR/Cas9_LacZ, a CRISPR gRNA plasmid from Lynne Postovit’s lab. It contains an...it won’t tell you whether the vector contains the gRNA insert or not. A blue-white screen, however, can...and distinguish between plasmids that contain the gRNA (white) from those that do not (blue). Let’s take..., you’ll want the proper positive and negative controls for your PCR.  Find the details and learn more...
  4. Twelve Amazing Guest Blog Contributors!

    Type
    Blog Post
    Published
    Nov. 26, 2024, 2:15 p.m.
    ...two posts. Flow Compensation and Flow Cytometry Controls Priyamvada Prathima, who wrote a helpful guide...software that predicts efficiencies of prime editing gRNAs.   PRIDICT Harvinder Virk and Michael Biddle, ...
  5. CRISPR 101: Which Cas9 Do I Choose for My CRISPR Experiment?

    Type
    Blog Post
    Published
    Oct. 13, 2022, 1:45 p.m.
    ...selecting a sgRNA Addgene may carry a validated sgRNA for your target gene.  Validated gRNAs are a great...of the many freely available sgRNA design programs. Find Validated gRNAs for Your Next CRISPR Experiment..., consists of a dCas9-VP64 fusion and a modified gRNA that is capable of interacting with an additional...efficient homology-directed repair and temperature-controlled genome editing. Nat. Commun. 2017 81 8, 1–9 (...background with our CRISPR Guide Find Software Tools for gRNA Design    ...new sgRNA for your experiment, select from a variety of empty sgRNA vectors and design your sgRNA targeting...other.  If having two sgRNAs isn’t feasible for your experiment, ensure your sgRNA sequence has little ...
  6. Optimizing Donor DNA for Enhanced CRISPR Genome Editing

    Type
    Blog Post
    Published
    March 24, 2016, 2:30 p.m.
    ...homology-directed human genome engineering by controlled timing of CRISPR/Cas9 delivery." Elife 3 (2015...Brush Up on Your HDR Basics Learn How to Design Your gRNA Find the Ideal CRISPR Software for Your Needs Resources...Plasmids for Your Research Check out Our List of gRNA Design Tools ...research with a simple question: how do Cas9 and sgRNA interact with and dissociate from a DNA target? ..., requiring expressed Cas9 protein, transcribed sgRNA, and optional donor DNA. Chris Richardson is a...
  7. Another Pathway into Cells: iTOP

    Type
    Blog Post
    Published
    June 23, 2015, 8:37 p.m.
    ...both purified CPP-tagged protein and an untagged control could enter cultured cells and activate expression...iTOP efficiently took up both Cas9 protein and a gRNA (yes, iTOP can also be used for RNA transduction...of iTOP. iTOP can be used to transduce Cas9 and a gRNA, which subsequently enter the nucleus and cleave...
  8. Mobile-CRISPRi: Bringing CRISPRi to Diverse Bacteria

    Type
    Blog Post
    Published
    April 4, 2019, 12:53 p.m.
    ...treated with a folA gRNA were more sensitive to trimethoprim when compared to control gRNA treated or untreated...promoters, antibiotic resistance selection markers, gRNAs, and dCas9 proteins. Second, it can be introduced...
  9. Viral Vectors 101: Parts of the AAV Transfer Plasmid

    Type
    Blog Post
    Published
    Aug. 11, 2020, 1:15 p.m.
    ...smaller CRISPR-Cas proteins such as SaCas9, CRISPR gRNAs, or your gene of interest. Promoter The promoter... promoters are upstream or 5’ of the gene they control. Promoters can be organism or tissue type-specific...recombinase, are used to spatially and temporally control transgene expression. Lox sites are directional...availability of Cre, lox sites lets researchers control the spatial and temporal activation of a transgene...
  10. CRISPR 101: Making a Knock-In Cell Line

    Type
    Blog Post
    Published
    Dec. 22, 2022, 2:15 p.m.
    ...Then choose which Cas enzyme to use and design a gRNA to where you would like to introduce the edit. Finally...homology-directed human genome engineering by controlled timing of CRISPR/Cas9 delivery. eLIFE. (2014)...efficient homology-directed repair and termperature-controlled genome editing. Nat. Com., 8(2024), (2017). 10.1038....org Browse All CRISPR Plasmids Find Validated gRNAs for Your Next Experiment Check out our CRISPR Guide... (Yu et al., Nat Chem Biol). Mutate the PAM or sgRNA sequences Cas9 likely goes through multiple rounds...
  11. 22 Hot Plasmid Technologies from 2014

    Type
    Blog Post
    Published
    Jan. 6, 2015, 5:21 p.m.
    ...1143-8.  A new tool for CRISPR gRNA validation Selecting a gRNA sequence that effectively targets...DNA break. Next, the gRNA being tested is expressed along with Cas9. If the gRNA effectively cuts the ...Technology Austria, decided to take a novel approach to control for these effects, drawing on the rapidly growing...for scientists to validate the efficacy of their gRNAs. The first step is to clone the target sequence ...also available at Addgene and can be used as a control for your experiments. For more information, please... allowing labs to precisely and non-invasively control neuronal signaling. For more information on DREADDs...viral (AAV) system enables greater spatio-temporal control over expression and increases the number of species...
  12. 15 Hot Plasmids from 2017

    Type
    Blog Post
    Published
    Jan. 9, 2018, 3:02 p.m.
    ...systems for multiplex gRNA expression. Expression of toolkit components can be controlled by a variety of promoters...protein and a tag, such as an NLS or NES, enables control over localization. Inserting PhoCl between an enzyme...enzyme and an inhibitor domain similarly allows for control of enzymatic activity. In addition, proteins can...subsequently tested the original BE3 and HF-BE3 using a gRNA with high off-target cutting, and they found that... constructs (wild-type and truncation mutants), gRNAs used for TZAP gene editing, and a Hi6xs-MBP tagged...compatible backbones that can be combined with your gRNA and repair templates of choice though modular cloning... a single, unique, and constitutively expressed sgRNA targeting the 5’ end of each essential gene. Koo...
  13. CRISPR/Cas9 FAQs Answered!

    Type
    Blog Post
    Published
    March 13, 2014, 4:08 p.m.
    ...Engineering Using CRISPR/Cas Systems has expanded out of control. To further consolidate these FAQs, Le Cong worked...consider that wildtype Cas9 with optimized chimeric gRNA has high efficiency but has been shown to have off-target... is that you can express two different chimeric gRNAs with the Cas9 nickase which will together introduce...with efficiency similar to using a single chimeric gRNA. At the same time, the off-target effects are reduced...sequence, and the concentration of Cas9 and guide RNA (gRNA). These considerations only matter if the PAM sequence... by PAM. See Addgene's CRISPR resources page for gRNA design software. Q5: Is it possible to target a ...which of your colonies carry the correct insert (gRNA) in pX330/pX335 with BbsI/AgeI double digestion....
  14. Plasmids 101: In-house NGS Plasmid Quality Control Now at Addgene

    Type
    Blog Post
    Published
    April 6, 2021, 12:30 p.m.
    ...Addgene - we had used Sanger sequencing for quality control for over ten years. Now, thanks to a generous donation...The first step we take when performing quality control of newly deposited plasmids is to align the NGS... by the depositing lab, we call these “quality control (QC) issues.” We then ask the depositing laboratory...variable portion of the plasmid in the pool - ex. the gRNA in a CRISPR library. In general, our QC scientists...
  15. CRISPR-based Genome Editing Systems For Editing in E. coli

    Type
    Blog Post
    Published
    April 13, 2021, 1:15 p.m.
    ...at 37 °C.     The new pEcCas/pEcgRNA system We speculated that the gRNA on pCas that is specific to the...system with the updated pEcCas/pEcgRNA system, and confirmed that indeed the gRNA-pMB1 had a slightly higher...changes. In pCas9, we 1) replaced the promoter of gRNA-pMB1 with PrhaB, 2) changed the replicon of pCas...expression which can be unstable and lack precise control over copy number. MUCICAT system contains 4 plasmids...process begins with the addition of the sgRNA sequence in pEcgRNA. Next both plasmids are transformed in...generate pEcgRNA. The ccdB serves as a counterselection marker and will be replaced by the sgRNA targeting...the newly generated pEcCas/pEcgRNA system.   Advantages of the pEcCas/pEcgRNA system Compared with the ...
  16. Overcoming the AAV Size Limitation for CRISPR Delivery

    Type
    Blog Post
    Published
    Sept. 16, 2020, 1 p.m.
    ...not increased compared to a control AAV-GFP. Not only did the AAV-SaCas9-sgRNA constructs mediate genome... packaging Streptococcus pyogenes (SpCas9) and a gRNA together (~4.2 kb) into an AAV vector is challenging...Zhang's group previously packaged Cas9 and multiple gRNAs into separate AAV vectors, increasing overall packaging...regulatory sequences while still fitting Cas9 and its gRNAs into one AAV, Cas9 must be made smaller. Previous... the Zhang lab created an all-in-one SaCas9 and sgRNA construct using the liver-specific serotype AAV8...
  17. Viral Vectors 101: What is a Virus (and a Viral Vector)?

    Type
    Blog Post
    Published
    Aug. 18, 2023, 4:15 p.m.
    ...the case of retroviruses, reverse transcribe their gRNA into DNA, which is then transcribed into mRNA before...is. Thankfully, through the use of engineering controls — changes made to the virus that eliminate or ...viral vectors to reproduce only in experimentally controlled conditions, making them far safer to work with...
  18. Quickest Way to Deposit Plasmids: The Deposit Spreadsheet

    Type
    Blog Post
    Published
    March 8, 2017, 3:15 p.m.
    ...MTA) approval  Send plasmids to Addgene  Quality control  In this post, we’ll explain how to use our deposit... Type Choose from: Encodes one insert, encodes gRNA/shRNA, or empty backbone. Purpose Answer “...Citing Addgene Plasmids Searchable and Sortable gRNAs for Your Next CRISPR Experiment Suggest A Plasmid...
  19. Hot Plasmids and Viral Preps - January 2021

    Type
    Blog Post
    Published
    Jan. 5, 2021, 2:15 p.m.
    ... A fast blue-light inducible Cre for precise control of bacterial gene expression By Meghan Rego Recombinases...recombinases to manipulate genomes, scientists can control expression of their genes of interest. While recombinases...their activity can be fine-tuned and precisely controlled through the use of optogenetics. Optogenetic ...is mediated by recruitment of MS2-functionalized gRNAs.  Find the yeast CRISPRa plasmids here Reduce ...
  20. Expanding the Targeting Scope and Editing Efficiency of Adenine Base Editors

    Type
    Blog Post
    Published
    March 17, 2020, 1:32 p.m.
    ...Through molecular biology teamwork. The guide RNA (gRNA) specifies the editing target site on the DNA, the...that expresses gene III. Gene III is under the control of a T7 RNA polymerase and cannot be expressed ...the deaminase TadA-7.10 A mutagenesis plasmid controlling the phage mutation rate Phage infection results...
Showing: 41 - 60 of 93 results