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Human pancreatic islet three-dimensional chromatin architecture provides insights into the genetics of type 2 diabetes.
Miguel-Escalada I, Bonas-Guarch S, Cebola I, Ponsa-Cobas J, Mendieta-Esteban J, Atla G, Javierre BM, Rolando DMY, Farabella I, Morgan CC, Garcia-Hurtado J, Beucher A, Moran I, Pasquali L, Ramos-Rodriguez M, Appel EVR, Linneberg A, Gjesing AP, Witte DR, Pedersen O, Grarup N, Ravassard P, Torrents D, Mercader JM, Piemonti L, Berney T, de Koning EJP, Kerr-Conte J, Pattou F, Fedko IO, Groop L, Prokopenko I, Hansen T, Marti-Renom MA, Fraser P, Ferrer J
Nat Genet. 2019 Jun 28. pii: 10.1038/s41588-019-0457-0. doi: 10.1038/s41588-019-0457-0.
PubMed Article

Plasmids from Article

ID Plasmid  
118152pScaffold-H1 donor
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118153pSpCas9(BB)-T2A-HygR
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118155Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR
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118161Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR BFP-guide1
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118162Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR EGFP-guide1
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118163Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR EGFP-guide2
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118164Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR EGFP-guide3
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118165lentiSAMv2 BFP-guide1
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118166lentiSAMv2 EGFP-guide1
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118167lentiSAMv2 EGFP-guide2
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118168lentiSAMv2 EGFP-guide3
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118169Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR TCF7L2 TSS-guide1
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118170Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR TCF7L2 TSS-guide2
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118171Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR TCF7L2 TSS-guide3
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118172Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR TCF7L2 TSS-guide4
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118173Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR GLIS3 TSS-guide1
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118174Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR GLIS3 TSS-guide2
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118175Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR GLIS3 TSS-guide3
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118176Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR GLIS3 TSS-guide4
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118177Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR CAMK1D TSS-guide1
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118178Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR CAMK1D TSS-guide2
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118179Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR CAMK1D TSS-guide3
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118180Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR CAMK1D TSS-guide4
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118181Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR OPTN TSS-guide1
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118182Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR OPTN TSS-guide2
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118183Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR OPTN TSS-guide3
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118184lentiSAMv2 TCF7L2 TSS-guide1
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118185lentiSAMv2 TCF7L2 TSS-guide2
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118186lentiSAMv2 TCF7L2 TSS-guide3
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118187lentiSAMv2 TCF7L2 TSS-guide4
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118188lentiSAMv2 GLIS3 TSS-guide1
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118189lentiSAMv2 GLIS3 TSS-guide2
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118190lentiSAMv2 GLIS3 TSS-guide3
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118191lentiSAMv2 GLIS3 TSS-guide4
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118192lentiSAMv2 CAMK1D TSS-guide1
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118193lentiSAMv2 CAMK1D TSS-guide2
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118194lentiSAMv2 CAMK1D TSS-guide3
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118195lentiSAMv2 CAMK1D TSS-guide4
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118196lentiSAMv2 OPTN TSS-guide1
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118197lentiSAMv2 OPTN TSS-guide2
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118198lentiSAMv2 OPTN TSS-guide3
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118199lentiSAMv2 OPTN TSS-guide4
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118200Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs7903146-guide3
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118201Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs11257655-guide2
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118202Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs11257655-guide3
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118203Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs11257655-guide4
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118204lentiSAMv2 rs7903146-guide3
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118205lentiSAMv2 rs11257655-guide2
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118206lentiSAMv2 rs11257655-guide3
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118207lentiSAMv2 rs11257655-guide4
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125393Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs11257655-guide1
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125394Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs7903146-guide1
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125395Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs7903146-guide2
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125396Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs7903146-guide4
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125397Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs4237150-guide1
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125398Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs4237150-guide3
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125399Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs4237150-guide4
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125400Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh1-guide1
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125401Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh1-guide2
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125402Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh1-guide3
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125403Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh1-guide4
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125404Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh2-guide1
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125406Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh2-guide3
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125407Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh2-guide4
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125408Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh3-guide1
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125409Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh3-guide2
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125410Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh3-guide3
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125411Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4AB-enh3-guide4
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125412Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR VPS13C-TSS-guide1
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125414Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR VPS13C-TSS-guide3
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125415Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR VPS13C-TSS-guide4
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125416Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4A-TSS-guide1
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125417Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4A-TSS-guide2
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125418Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4A-TSS-guide3
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125419Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4A-TSS-guide4
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125420Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4B-TSS-guide1
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125421Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4B-TSS-guide2
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125422Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4B-TSS-guide3
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125423Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR C2CD4B-TSS-guide4
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125424Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs1401419-guide1
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125425Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs1401419-guide2
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125426Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs1401419-guide3
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125427Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs1401419-guide4
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125428Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR CRY2-TSS-guide1
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125429Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR CRY2-TSS-guide2
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125430Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR CRY2-TSS-guide3
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125431Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR CRY2-TSS-guide4
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125432Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR PHF21A-TSS-guide1
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125433Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR PHF21A-TSS-guide2
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125434Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR PHF21A-TSS-guide3
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125435Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR PHF21A-TSS-guide4
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125436Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs12189774-guide1
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125437Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs12189774-guide2
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125438Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs12189774-guide3
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125439Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs12189774-guide4
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125441Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR VEGFA-TSS-guide2
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125442Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR VEGFA-TSS-guide3
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125443Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR VEGFA-TSS-guide4
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125444Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs7732130-guide1
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125445Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs7732130-guide2
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125446Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs7732130-guide3
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125447Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs7732130-guide4
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125448Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR ZBED3-TSS-guide1
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125449Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR ZBED3-TSS-guide2
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125450Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR ZBED3-TSS-guide3
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125451Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR ZBED3-TSS-guide4
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125452Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs58692659-guide1
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125453Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs58692659-guide2
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125454Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs58692659-guide3
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125455Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR rs58692659-guide4
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125456Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR ZFAND3-guide1
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125457Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR ZFAND3-guide2
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125458Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR ZFAND3-guide3
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125459Lenti-(BB)-hPGK-KRAB-dCas9-P2A-BlastR ZFAND3-guide4
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125460lentiSAMv2 rs11257655-guide1
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125461lentiSAMv2 rs7903146-guide2
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125462lentiSAMv2 rs4237150-guide2
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125463lentiSAMv2 rs4237150-guide3
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125464lentiSAMv2 rs4237150-guide4
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125465lentiSAMv2 C2CD4A/B-enh1-guide1
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125466lentiSAMv2 C2CD4A/B-enh1-guide2
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125467lentiSAMv2 C2CD4A/B-enh1-guide3
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125468lentiSAMv2 C2CD4A/B-enh1-guide4
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125469lentiSAMv2 C2CD4A/B-enh2-guide1
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125470lentiSAMv2 C2CD4A/B-enh2-guide2
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125471lentiSAMv2 C2CD4A/B-enh2-guide3
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125472lentiSAMv2 C2CD4A/B-enh2-guide4
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125473lentiSAMv2 C2CD4A/B-enh3-guide1
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125474lentiSAMv2 C2CD4A/B-enh3-guide2
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125475lentiSAMv2 C2CD4A/B-enh3-guide3
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125476lentiSAMv2 VPS13C-TSS-guide1
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125477lentiSAMv2 VPS13C-TSS-guide2
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125478lentiSAMv2 VPS13C-TSS-guide3
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125479lentiSAMv2 VPS13C-TSS-guide4
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125480lentiSAMv2 C2CD4A-TSS-guide1
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125481lentiSAMv2 C2CD4A-TSS-guide2
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125482lentiSAMv2 C2CD4A-TSS-guide3
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125483lentiSAMv2 C2CD4A-TSS-guide4
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125484lentiSAMv2 C2CD4B-TSS-guide1
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125485lentiSAMv2 C2CD4B-TSS-guide4
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125486lentiSAMv2 rs1401419-guide1
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125487lentiSAMv2 rs1401419-guide2
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125488lentiSAMv2 rs1401419-guide3
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125489lentiSAMv2 rs1401419-guide4
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125490lentiSAMv2 CRY2-TSS-guide2
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125491lentiSAMv2 CRY2-TSS-guide3
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125492lentiSAMv2 PHF21A-TSS-guide1
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125493lentiSAMv2 PHF21A-TSS-guide2
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125494lentiSAMv2 PHF21A-TSS-guide3
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125495lentiSAMv2 PHF21A-TSS-guide4
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125496lentiSAMv2 rs12189774-guide1
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125497lentiSAMv2 rs12189774-guide2
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125498lentiSAMv2 rs12189774-guide3
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125499lentiSAMv2 rs12189774-guide4
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125500lentiSAMv2 VEGFA-TSS-guide1
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125501lentiSAMv2 VEGFA-TSS-guide2
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125502lentiSAMv2 VEGFA-TSS-guide4
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125503lentiSAMv2 rs7732130-guide1
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125504lentiSAMv2 rs7732130-guide2
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125505lentiSAMv2 rs7732130-guide3
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125506lentiSAMv2 ZBED3-TSS-guide1
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125507lentiSAMv2 ZBED3-TSS-guide2
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125508lentiSAMv2 ZBED3-TSS-guide3
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125509lentiSAMv2 rs58692659-guide1
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125510lentiSAMv2 rs58692659-guide2
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125511lentiSAMv2 rs58692659-guide3
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125512lentiSAMv2 rs58692659-guide4
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125513lentiSAMv2 ZFAND3-guide1
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125514lentiSAMv2 ZFAND3-guide2
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125515lentiSAMv2 ZFAND3-guide3
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125516lentiSAMv2 ZFAND3-guide4
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