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High-resolution profiling reveals coupled transcriptional and translational regulation of transgenes.

Peterman EL, Ploessl DS, Love KS, Sanabria V, Daniels RF, Johnstone CP, Godavarti DR, Kabaria SR, Oakes CG, Pai AA, Galloway KE
Nucleic Acids Research, Volume 53, Issue 11, 24 June 2025, gkaf528 (Link opens in a new window) PubMed (Link opens in a new window) Article

Plasmids from Article

ID Plasmid Purpose
239686pKG2039_pPV1-CAGBsaI Golden Gate assembly plasmid encoding the CAG promoter
239687pKG2019_pPV1-EF1aBsaI Golden Gate assembly plasmid encoding the EF1a promoter
239689pKG1988_pPV1-UbCBsaI Golden Gate assemby plasmid encoding the UbC promoter
239691pKG1367_pPV1-hPGKBsaI Golden Gate assembly plasmid encoding the hPGK promoter
239693pKG0743_pPV1-ZF43x6-CBsaI Golden Gate assembly plasmid encoding the COMET ZF43x6-C promoter
239694pKG3657_pPV1-ZF10.BSx8BsaI Golden Gate assembly plasmid encoding the synZiFTR ZF10.BSx8 promoter
239695pKG0586_pPV2-mRuby2BsaI Golden Gate assembly plasmid encoding the mRuby2 CDS
239696pKG2387_pPV2-mRuby2-P2A-PuroRBsaI Golden Gate assembly plasmid encoding the mRuby2-P2A-PuroR CDS
239697pKG1055_pPV2-tagBFPBsaI Golden Gate assembly plasmid encoding the tagBFP CDS
239698pKG3659_pPV2-rtTA-P2A-iRFP720BsaI Golden Gate assembly plasmid encoding the rtTA-P2A-iRFP720 CDS
239699pKG3658_pPV2-NLS-FXBP-ZF43-P2A-NES-VP64-FRB-P2A-iRFP720BsaI Golden Gate assembly plasmid encoding the COMET NLS-FXBP-ZF43-P2A-NES-VP64-FRB-P2A-iRFP720 CDS
239701pKG0587_pPV3-bGHBsaI Golden Gate assembly plasmid encoding the bGH PAS
239702pKG0588_pPV3-SV40BsaI Golden Gate assembly plasmid encoding SV40 PAS
239703pKG1313_pPV3-WPREBsaI Golden Gate assembly plasmid encoding the WPRE 3' UTR sequence
239705pKG1334_pHarbor-PiggyBac_backbonePaqCI Golden Gate assembly plasmid encoding the backbone for PiggyBac-mediated integration
239706pKG3560_pHarbor-Rogi2_backbonePaqCI Golden Gate assembly plasmid encoding the backbone for Bxb1-mediated integration in the Rogi2 landing pad line
239707pKG1970_pGEEC501_pShip-EFS-mRuby2-bGHPlasmid expressing mRuby2 with the EFS promoter and bGH 3' UTR
239708pKG1971_pGEEC502_pShip-EFS-mRuby2-SV40Plasmid expressing mRuby2 with the EFS promoter and SV40 3' UTR
239709pKG1972_pGEEC503_pShip-EFS-mRuby2-WPREPlasmid expressing mRuby2 with the EFS promoter and WPRE 3' UTR
239710pKG1973_pGEEC504_pShip-hPGK-mRuby2-bGHPlasmid expressing mRuby2 with the hPGK promoter and bGH 3' UTR
239711pKG1974_pGEEC505_pShip-hPGK-mRuby2-SV40Plasmid expressing mRuby2 with the hPGK promoter and SV40 3' UTR
239712pKG1975_pGEEC506_pShip-hPGK-mRuby2-WPREPlasmid expressing mRuby2 with the hPGK promoter and WPRE 3' UTR
239713pKG2021_pGEEC507_pShip-UbC-mRuby2-bGHPlasmid expressing mRuby2 with the UbC promoter and bGH 3' UTR
239714pKG2022_pGEEC508_pShip-UbC-mRuby2-SV40Plasmid expressing mRuby2 with the UbC promoter and SV40 3' UTR
239715pKG2023_pGEEC509_pShip-UbC-mRuby2-WPREPlasmid expressing mRuby2 with the UbC promoter and WPRE 3' UTR
239716pKG2116_pGEEC510_pShip-EF1a-mRuby2-bGHPlasmid expressing mRuby2 with the EF1a promoter and bGH 3' UTR
239717pKG2117_pGEEC511_pShip-EF1a-mRuby2-SV40Plasmid expressing mRuby2 with the EF1a promoter and SV40 3' UTR
239718pKG2118_pGEEC512_pShip-EF1a-mRuby2-WPREPlasmid expressing mRuby2 with the EF1a promoter and WPRE 3' UTR
239719pKG2075_pGEEC516_pShip-CAG-mRuby2-bGHPlasmid expressing mRuby2 with the CAG promoter and bGH 3' UTR
239720pKG2076_pGEEC517_pShip-CAG-mRuby2-SV40Plasmid expressing mRuby2 with the CAG promoter and SV40 3' UTR
239721pKG2077_pGEEC518_pShip-CAG-mRuby2-WPREPlasmid expressing mRuby2 with the CAG promoter and WPRE 3' UTR
239722pKG2309_pGEEC524_pShip-EFS-ZF10-NS3-p65-bGHPlasmid expressing a grazoprevir-inducible transcriptional activator
239723pKG2215_pGEEC525_pShip-ZF43x6-C-mRuby2-bGHPlasmid expressing mRuby2 from a COMET promoter, Induced with pKG3666
239724pKG2410_pGEEC526_pShip-TRE3G-mRuby2-bGHPlasmid expressing mRuby2 from the TRE3G promoter, Induced with pKG3668
239725pKG2497_pGEEC529_pShip-CMV-mRuby2-bGHPlasmid expressing mRuby2 with the CMV promoter and bGH 3' UTR
239726pKG2498_pGEEC530_pShip-CMV-mRuby2-SV40Plasmid expressing mRuby2 with the CMV promoter and SV40 3' UTR
239727pKG2499_pGEEC531_pShip-CMV-mRuby2-WPREPlasmid expressing mRuby2 with the CMV promoter and WPRE 3' UTR
239728pKG2436_pGEEC532_pShip-EF1a-mRuby2-P2A-PuroR-bGHPlasmid expressing mRuby2 and PuroR with the EF1a promoter
239729pKG2437_pGEEC533_pShip-EFS-mRuby2-P2A-PuroR-bGHPlasmid expressing mRuby2 and PuroR with the EFS promoter
239730pKG2438_pGEEC534_pShip-CMV-mRuby2-P2A-PuroR-bGHPlasmid expressing mRuby2 and PuroR with the CMV promoter
239731pKG2439_pGEEC535_pShip-hPGK-mRuby2-P2A-PuroR-bGHPlasmid expressing mRuby2 and PuroR with the hPGK promoter
239732pKG2440_pGEEC536_pShip-UbC-mRuby2-P2A-PuroR-bGHPlasmid expressing mRuby2 and PuroR with the UbC promoter
239733pKG2441_pGEEC537_pShip-CAG-mRuby2-P2A-PuroR-bGHPlasmid expressing mRuby2 and PuroR with the CAG promoter
239734pKG2906_pGEEC546_pShip-EFS-tagBFP-bGHPlasmid expressing tagBFP with the EFS promoter
239735pKG2907_pGEEC547_pShip-hPGK-tagBFP-bGHPlasmid expressing tagBFP with the hPGK promoter
239736pKG2897_pGEEC548_pShip-UbC-tagBFP-bGHPlasmid expressing tagBFP with the UbC promoter
239737pKG2899_pGEEC550_pShip-CMV-tagBFP-bGHPlasmid expressing tagBFP with the CMV promoter
239738pKG2900_pGEEC551_pShip-CAG-tagBFP-bGHPlasmid expressing tagBFP with the CAG promoter
239739pKG3660_pGEEC570_pShip-ZF10.BSx8-ybTATA-spacer-mRuby2-bGHPlasmid expressing mRuby2 from a SynZiFTR promoter, Induced with pKG2309
239740pKG3666_pGEEC576_pShip-EFS-ZF43a(inducible)-P2A-iRFP720-bGHPlasmid expressing a rapamycin-inducible transcriptional activator
239741pKG3668_pGEEC578_pShip-EFS-rtTA-P2A-iRFP720-bGHPlasmid expressing a doxycycline-inducible transcriptional activator
239742pKG3831_pGEEC579_pShip-UbC(no_intron)-mRuby2-bGHPlasmid expressing mRuby from a UbC promoter lacking an intron, used for modRNA production
239743pKG3774_pGEEC580_pShip-EF1a(no_intron)-mRuby2-bGHPlasmid expressing mRuby from an EF1a promoter lacking an intron, used for modRNA production
239744pKG3775_pGEEC582_pShip-hPGK(promoter)-CMV(UTR)-mRuby2-bGHPlasmid expressing mRuby2 from the hPGK canonical promoter with the CMV 5' UTR
239745pKG3776_pGEEC583_pShip-hPGK(promoter)-EFS(UTR)-mRuby2-bGHPlasmid expressing mRuby2 from the hPGK canonical promoter with the EFS 5' UTR
239746pKG3777_pGEEC584_pShip-EFS(promoter)-CMV(UTR)-mRuby2-bGHPlasmid expressing mRuby2 from the EFS canonical promoter with the CMV 5' UTR
239747pKG3778_pGEEC585_pShip-EFS(promoter)-hPGK(UTR)-mRuby2-bGHPlasmid expressing mRuby2 from the EFS canonical promoter with the hPGK 5' UTR
239748pKG3779_pGEEC586_pShip-CMV(promoter)-EFS(UTR)-mRuby2-bGHPlasmid expressing mRuby2 from the CMV canonical promoter with the EFS 5' UTR
239749pKG3780_pGEEC587_pShip-CMV(promoter)-hPGK(UTR)-mRuby2-bGHPlasmid expressing mRuby2 from the CMV canonical promoter with the hPGK 5' UTR

Antibodies from Article