We narrowed to 35 results for: Tight TRE
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TypeBlog PostPublishedMarch 24, 2016, 2:30 p.m....factors (which repair those breaks) makes Cas9 extremely effective as a genome editing reagent. This interplay...sides of the break, we determined that Cas9 held tightly to three of the four strands of the cleaved duplex...2014) have shown that this technique supports extremely high frequencies of genome cutting and, when donor...DNA is included in the nucleofection reaction, extremely high frequencies of HDR. The detailed protocol...
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Antibodies 101: Conjugation
TypeBlog PostPublishedMarch 26, 2024, 1:15 p.m.... but it has a strong affinity for avidin and streptavidin, both of which can bind up to four biotin molecules...Whatever the conjugate, the molecules must somehow be tightly linked to your antibody. This chemical coupling...PK (2012) A deep profiler’s guide to cytometry. Trends Immunol 33:323–332. https://doi.org/10.1016/j.it... -
Plasmids 101: Cre-lox
TypeBlog PostPublishedJan. 13, 2015, 3:47 p.m....often called a “lox-stop-lox” or “LSL” cassette) upstream of a gene of interest will prevent gene expression...eviction. Regulated Cre expression – placing Cre downstream of promoters that are active only in certain ...limitation of using loxP sites is the inability to tightly control which loxP sites recombine if more than... -
Working with Nuclear Receptors
TypeBlog PostPublishedJuly 15, 2014, 4:03 p.m....transported from cells, traverse the body through the bloodstream, and eventually elicit their actions on other...drugs currently available or being developed to treat a multitude of therapeutic indices, including hypertension...The coregulator ‘core’ complex is composed of a tightly-bound invariant group of proteins, whereas the ... -
Illuminating Epigenetics with A FRET Based Biosensor
TypeBlog PostPublishedNov. 19, 2015, 3:30 p.m....study and treat complex or multifactorial diseases, enabling faster diagnosis and treatment and improving...expression can change as well. The more frequently and tightly bound DNA is to histones, the more compacted it... -
Antibodies 101: Introduction to Gating in Flow Cytometry
TypeBlog PostPublishedApril 4, 2024, 1:15 p.m....(see Figure 2). H describes the maximum signal strength, while W results from the time that the cell spent...increase the electric current and thereby the signal strength. So, we need to adjust the voltage in the cytometer...populations. Oftentimes, you’ll be presented with a trend of two populations with basically a smear in between..., it can depend on the type of stain whether a tighter or looser gate makes sense. Here, luckily, the ... -
Stabilized Bacterial Promoters: Constant Gene Expression at any Copy Number
TypeBlog PostPublishedSept. 4, 2018, 12:53 p.m....repressor because TALEs can be programmed to bind tightly to arbitrary DNA sequences and have been shown ...concentrations of IPTG, a constitutive promoter upstream of GFP increased expression of GFP six-fold, but... -
To Each HIS Own
TypeBlog PostPublishedMarch 2, 2023, 2:15 p.m.... histidine residues that are present, the more tightly the protein will bind to the metal ion substrate...if you need a very pure sample. Because binding strength is proportional to the length of the tag, with... -
Don’t FRET: Bimolecular Fluorescence Complementation Makes Visualizing Protein-Protein Interactions Easy
TypeBlog PostPublishedAug. 27, 2020, 1:15 p.m....easy-to-transfect cell lines where plasmid dosage can be tightly controlled. This is also theoretically possible...Patrick is equal parts neuroscientist, writer, and extreme sports enthusiast. He recently obtained his Ph.... -
DNA Purification Without a Kit
TypeBlog PostPublishedFeb. 11, 2020, 2:15 p.m..... At this point, the plasmid DNA sample can be treated with RNase to remove RNA contamination and you ...nucleic acids. Containinants bind cellulose less tightly than nucleic acids, so placing the dipstick into... -
CRISPR Methods for Bacteria: Genome Engineering, CRISPRa, CRISPRi, Base Editing, and More
TypeBlog PostPublishedSept. 28, 2020, noon...curing time. pCRISPomyces for editing in Streptomyces Streptomyces bacteria produce a wide variety of bioactive...requires only 2-3 hours incubation. E. coli and T. citrea scarless editing plasmids Sheng Yang’s lab describes..., the system was used successfully in Tatumella citrea, another species of Enterobacteriaceae, without...created two “pCRISPomyces” systems for use in Streptomyces (Cobb et al., 2015). pCRISPomyces-1 includes...Gibson Assembly or restriction enzyme cloning. Streptomyces bacteria are more recombinogenic than E. coli... repression in the Gram-positive bacterium, Streptococcus pneumoniae. Robert Husson lab's M. tuberculosis...enzyme. They identified the Cas9 orthologue from Streptococcus thermophilus, Cas9sth1 as a robust and highly... -
Plasmids 101: E. coli Strains for Protein Expression
TypeBlog PostPublishedFeb. 10, 2015, 3:06 p.m....toxic or insoluble proteins Origami2 (DE3)** Streptomycin and Tetracycline Contains highly active thioredoxin...—the difference being that the latter provides tighter control of basal expression. What if I don't see... -
Evolution of Brainbow: Using Cre-lox for Multicolor Labeling of Neurons
TypeBlog PostPublishedApril 24, 2015, 2:39 p.m....Drosophila. Why Brainbow? Brainbow highlights the trend in biology towards single-cell resolution imaging...development of a new technique. In a structure as tightly packed and interwoven as the brain, robust single-cell... -
PiggyBac-ing Through the Genome Editing Field
TypeBlog PostPublishedMay 31, 2016, 3:30 p.m....piggyBac™, the number of integration copies can be tightly controlled by titrating the transposase to transposon...piggyBac-ing models and new therapeutic strategies.,” Trends Biotechnol., vol. 33, no. 9, pp. 525–33, Sep. 2015... -
CRISPR 101: Cytosine and Adenine Base Editors
TypeBlog PostPublishedFeb. 13, 2025, 2:15 p.m....identically to BE3, modifying a 3-5 base window 18 bases upstream of the PAM. David Liu’s lab generated BE3 variants... window of only a few nucleotides, so they are tightly constrained by PAM availability in the genome. ...Edits 3-5 base window surrounding -18 position upstream of the PAM Kim et al., 2017 SaBE3, BE3 PAM variants...