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Ube1/PET21d Citations (21)

Plasmid Article: A spectrophotometric assay for conjugation of ubiquitin and ubiquitin-like proteins.
Berndsen CE, Wolberger C Anal Biochem. 2011 Nov 1;418(1):102-10. Epub 2011 Jul 2.
PubMed Journal

Articles Citing Ube1/PET21d

Structural basis for the indispensable role of a unique zinc finger motif in LNX2 ubiquitination. Nayak D, Sivaraman J. Oncotarget. 2015 Oct 27;6(33):34342-57. doi: 10.18632/oncotarget.5326. PubMed
In Vitro Ubiquitination: Self-Ubiquitination, Chain Formation, and Substrate Ubiquitination Assays. Maspero E, Polo S. Methods Mol Biol. 2016;1449:153-60. doi: 10.1007/978-1-4939-3756-1_7. PubMed
The Arabidopsis paralogs, PUB46 and PUB48, encoding U-box E3 ubiquitin ligases, are essential for plant response to drought stress. Adler G, Konrad Z, Zamir L, Mishra AK, Raveh D, Bar-Zvi D. BMC Plant Biol. 2017 Jan 11;17(1):8. doi: 10.1186/s12870-016-0963-5. PubMed
Methods to Investigate EGFR Ubiquitination. Conte A, Sigismund S. Methods Mol Biol. 2017;1652:81-100. doi: 10.1007/978-1-4939-7219-7_5. PubMed
An invisible ubiquitin conformation is required for efficient phosphorylation by PINK1. Gladkova C, Schubert AF, Wagstaff JL, Pruneda JN, Freund SM, Komander D. EMBO J. 2017 Dec 15;36(24):3555-3572. doi: 10.15252/embj.201797876. Epub 2017 Nov 13. PubMed

Associated Plasmids

p62 filaments capture and present ubiquitinated cargos for autophagy. Zaffagnini G, Savova A, Danieli A, Romanov J, Tremel S, Ebner M, Peterbauer T, Sztacho M, Trapannone R, Tarafder AK, Sachse C, Martens S. EMBO J. 2018 Mar 1;37(5). pii: embj.201798308. doi: 10.15252/embj.201798308. Epub 2018 Jan 17. PubMed

Associated Plasmids

Structure of LNX1:Ubc13~Ubiquitin Complex Reveals the Role of Additional Motifs for the E3 Ligase Activity of LNX1. Nayak D, Sivaraman J. J Mol Biol. 2018 Apr 13;430(8):1173-1188. doi: 10.1016/j.jmb.2018.02.016. Epub 2018 Feb 26. PubMed
Chaperone-Independent Peripheral Quality Control of CFTR by RFFL E3 Ligase. Okiyoneda T, Veit G, Sakai R, Aki M, Fujihara T, Higashi M, Susuki-Miyata S, Miyata M, Fukuda N, Yoshida A, Xu H, Apaja PM, Lukacs GL. Dev Cell. 2018 Mar 26;44(6):694-708.e7. doi: 10.1016/j.devcel.2018.02.001. Epub 2018 Mar 1. PubMed
Comparative biochemical analysis of UHRF proteins reveals molecular mechanisms that uncouple UHRF2 from DNA methylation maintenance. Vaughan RM, Dickson BM, Cornett EM, Harrison JS, Kuhlman B, Rothbart SB. Nucleic Acids Res. 2018 May 18;46(9):4405-4416. doi: 10.1093/nar/gky151. PubMed
Mechanism of parkin activation by PINK1. Gladkova C, Maslen SL, Skehel JM, Komander D. Nature. 2018 Jul;559(7714):410-414. doi: 10.1038/s41586-018-0224-x. Epub 2018 Jun 6. PubMed
Chromatin structure and its chemical modifications regulate the ubiquitin ligase substrate selectivity of UHRF1. Vaughan RM, Dickson BM, Whelihan MF, Johnstone AL, Cornett EM, Cheek MA, Ausherman CA, Cowles MW, Sun ZW, Rothbart SB. Proc Natl Acad Sci U S A. 2018 Aug 28;115(35):8775-8780. doi: 10.1073/pnas.1806373115. Epub 2018 Aug 13. PubMed
A bidentate Polycomb Repressive-Deubiquitinase complex is required for efficient activity on nucleosomes. Foglizzo M, Middleton AJ, Burgess AE, Crowther JM, Dobson RCJ, Murphy JM, Day CL, Mace PD. Nat Commun. 2018 Sep 26;9(1):3932. doi: 10.1038/s41467-018-06186-1. PubMed
INAVA-ARNO complexes bridge mucosal barrier function with inflammatory signaling. Luong P, Hedl M, Yan J, Zuo T, Fu TM, Jiang X, Thiagarajah JR, Hansen SH, Lesser CF, Wu H, Abraham C, Lencer WI. Elife. 2018 Oct 25;7. pii: 38539. doi: 10.7554/eLife.38539. PubMed
The integral function of the endocytic recycling compartment is regulated by RFFL-mediated ubiquitylation of Rab11 effectors. Sakai R, Fukuda R, Unida S, Aki M, Ono Y, Endo A, Kusumi S, Koga D, Fukushima T, Komada M, Okiyoneda T. J Cell Sci. 2019 Feb 7;132(3). pii: jcs.228007. doi: 10.1242/jcs.228007. PubMed
Semisynthesis of ubiquitinated histone H2B with a native or nonhydrolyzable linkage. Morgan M, Jbara M, Brik A, Wolberger C. Methods Enzymol. 2019;618:1-27. doi: 10.1016/bs.mie.2019.01.003. Epub 2019 Feb 26. PubMed
Detection of ubiquitinated targets in mammalian and Drosophila models. Maspero E, Fajner V, Weber J, Polo S. Methods Enzymol. 2019;619:293-318. doi: 10.1016/bs.mie.2018.12.030. Epub 2019 Feb 11. PubMed
E3 ubiquitin-protein ligase TRIM21-mediated lysine capture by UBE2E1 reveals substrate-targeting mode of a ubiquitin-conjugating E2. Anandapadamanaban M, Kyriakidis NC, Csizmok V, Wallenhammar A, Espinosa AC, Ahlner A, Round AR, Trewhella J, Moche M, Wahren-Herlenius M, Sunnerhagen M. J Biol Chem. 2019 Jul 26;294(30):11404-11419. doi: 10.1074/jbc.RA119.008485. Epub 2019 Jun 3. PubMed
Ubiquitination of disease-causing CFTR variants in a microsome-based assay. Estabrooks SK, Brodsky JL. Anal Biochem. 2020 Sep 1;604:113829. doi: 10.1016/j.ab.2020.113829. Epub 2020 Jul 1. PubMed
The Mechanism of NEDD8 Activation of CUL5 Ubiquitin E3 Ligases. Lumpkin RJ, Ahmad AS, Blake R, Condon CJ, Komives EA. Mol Cell Proteomics. 2021 Jan 6;20:100019. doi: 10.1074/mcp.RA120.002414. PubMed
UBE1a Suppresses Herpes Simplex Virus-1 Replication. Ikeda M, Ito A, Sekine Y, Fujimuro M. Viruses. 2020 Dec 4;12(12). pii: v12121391. doi: 10.3390/v12121391. PubMed
Herpes simplex virus 1 infection induces ubiquitination of UBE1a. Ikeda M, Watanabe T, Ito A, Fujimuro M. Biochem J. 2021 Jan 15;478(1):261-279. doi: 10.1042/BCJ20200885. PubMed

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