pAAV-Ef1a-mCherry-IRES-Cre Citations (62)
Originally described in: Targeting cells with single vectors using multiple-feature Boolean logic.Fenno LE, Mattis J, Ramakrishnan C, Hyun M, Lee SY, He M, Tucciarone J, Selimbeyoglu A, Berndt A, Grosenick L, Zalocusky KA, Bernstein H, Swanson H, Perry C, Diester I, Boyce FM, Bass CE, Neve R, Huang ZJ, Deisseroth K Nat Methods. 2014 Jul;11(7):763-72. doi: 10.1038/nmeth.2996. Epub 2014 Jun 8. PubMed Journal
Articles Citing pAAV-Ef1a-mCherry-IRES-Cre
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| Ectopic Expression of alpha6 and delta GABAA Receptor Subunits in Hilar Somatostatin Neurons Increases Tonic Inhibition and Alters Network Activity in the Dentate Gyrus. Tong X, Peng Z, Zhang N, Cetina Y, Huang CS, Wallner M, Otis TS, Houser CR. J Neurosci. 2015 Dec 9;35(49):16142-58. doi: 10.1523/JNEUROSCI.2853-15.2015. PubMed |
| Reciprocal Circuits Linking the Prefrontal Cortex with Dorsal and Ventral Thalamic Nuclei. Collins DP, Anastasiades PG, Marlin JJ, Carter AG. Neuron. 2018 Apr 18;98(2):366-379.e4. doi: 10.1016/j.neuron.2018.03.024. Epub 2018 Apr 5. PubMed |
| Metastatic cancers promote cachexia through ZIP14 upregulation in skeletal muscle. Wang G, Biswas AK, Ma W, Kandpal M, Coker C, Grandgenett PM, Hollingsworth MA, Jain R, Tanji K, Lomicronpez-Pintado S, Borczuk A, Hebert D, Jenkitkasemwong S, Hojyo S, Davuluri RV, Knutson MD, Fukada T, Acharyya S. Nat Med. 2018 Jun;24(6):770-781. doi: 10.1038/s41591-018-0054-2. Epub 2018 Jun 6. PubMed |
| Cav3.2 T-type calcium channels shape electrical firing in mouse Lamina II neurons. Candelas M, Reynders A, Arango-Lievano M, Neumayer C, Fruquiere A, Demes E, Hamid J, Lemmers C, Bernat C, Monteil A, Compan V, Laffray S, Inquimbert P, Le Feuvre Y, Zamponi GW, Moqrich A, Bourinet E, Mery PF. Sci Rep. 2019 Feb 28;9(1):3112. doi: 10.1038/s41598-019-39703-3. PubMed |
| Trio Haploinsufficiency Causes Neurodevelopmental Disease-Associated Deficits. Katrancha SM, Shaw JE, Zhao AY, Myers SA, Cocco AR, Jeng AT, Zhu M, Pittenger C, Greer CA, Carr SA, Xiao X, Koleske AJ. Cell Rep. 2019 Mar 5;26(10):2805-2817.e9. doi: 10.1016/j.celrep.2019.02.022. PubMed |
| Synapse and Active Zone Assembly in the Absence of Presynaptic Ca(2+) Channels and Ca(2+) Entry. Held RG, Liu C, Ma K, Ramsey AM, Tarr TB, De Nola G, Wang SSH, Wang J, van den Maagdenberg AMJM, Schneider T, Sun J, Blanpied TA, Kaeser PS. Neuron. 2020 Aug 19;107(4):667-683.e9. doi: 10.1016/j.neuron.2020.05.032. Epub 2020 Jun 16. PubMed |
| Hyperactive ACC-MDT Pathway Suppresses Prepulse Inhibition in Mice. Kim Y, Noh YW, Kim K, Kim E. Schizophr Bull. 2021 Jan 23;47(1):31-43. doi: 10.1093/schbul/sbaa090. PubMed |
| Labeling Dual Presynaptic Inputs using cFork Anterograde Tracing System. Oh JY, Han JH, Lee H, Han YE, Rah JC, Park H. Exp Neurobiol. 2020 Jun 30;29(3):219-229. doi: 10.5607/en20006. PubMed |
| Impaired theta-gamma Coupling Indicates Inhibitory Dysfunction and Seizure Risk in a Dravet Syndrome Mouse Model. Jansen NA, Perez C, Schenke M, van Beurden AW, Dehghani A, Voskuyl RA, Thijs RD, Ullah G, van den Maagdenberg AMJM, Tolner EA. J Neurosci. 2021 Jan 20;41(3):524-537. doi: 10.1523/JNEUROSCI.2132-20.2020. Epub 2020 Nov 24. PubMed |
| Social isolation impairs the prefrontal-nucleus accumbens circuit subserving social recognition in mice. Park G, Ryu C, Kim S, Jeong SJ, Koo JW, Lee YS, Kim SJ. Cell Rep. 2021 May 11;35(6):109104. doi: 10.1016/j.celrep.2021.109104. PubMed |
| Endogenous beta-neurexins on axons and within synapses show regulated dynamic behavior. Klatt O, Repetto D, Brockhaus J, Reissner C, El Khallouqi A, Rohlmann A, Heine M, Missler M. Cell Rep. 2021 Jun 15;35(11):109266. doi: 10.1016/j.celrep.2021.109266. PubMed |
| Tuberous Sclerosis Complex (TSC) Inactivation Increases Neuronal Network Activity by Enhancing Ca(2+) Influx via L-Type Ca(2+) Channels. Hisatsune C, Shimada T, Miyamoto A, Lee A, Yamagata K. J Neurosci. 2021 Sep 29;41(39):8134-8149. doi: 10.1523/JNEUROSCI.1930-20.2021. Epub 2021 Aug 20. PubMed |
| The Contribution of Premotor Cortico-Striatal Projections to the Execution of Serial Order Sequences. Sanchez-Fuentes A, Ramirez-Armenta KI, Verma-Rodriguez AK, Diaz-Hernandez E, Aguilar-Palomares A, Ramirez-Jarquin JO, Tecuapetla F. eNeuro. 2021 Sep 21;8(5). pii: ENEURO.0173-21.2021. doi: 10.1523/ENEURO.0173-21.2021. Print 2021 Sep-Oct. PubMed |
| Short-Term Facilitation of Long-Range Corticocortical Synapses Revealed by Selective Optical Stimulation. Martinetti LE, Bonekamp KE, Autio DM, Kim HH, Crandall SR. Cereb Cortex. 2021 Sep 14. pii: 6369972. doi: 10.1093/cercor/bhab325. PubMed |
| A long-range, recurrent neuronal network linking the emotion regions with the somatic motor cortex. Wang Y, Sun QQ. Cell Rep. 2021 Sep 21;36(12):109733. doi: 10.1016/j.celrep.2021.109733. PubMed |
| A genetically defined insula-brainstem circuit selectively controls motivational vigor. Deng H, Xiao X, Yang T, Ritola K, Hantman A, Li Y, Huang ZJ, Li B. Cell. 2021 Dec 22;184(26):6344-6360.e18. doi: 10.1016/j.cell.2021.11.019. Epub 2021 Dec 9. PubMed |
| Virally encoded connectivity transgenic overlay RNA sequencing (VECTORseq) defines projection neurons involved in sensorimotor integration. Cheung V, Chung P, Bjorni M, Shvareva VA, Lopez YC, Feinberg EH. Cell Rep. 2021 Dec 21;37(12):110131. doi: 10.1016/j.celrep.2021.110131. PubMed |
| The anterior cingulate cortex and its role in controlling contextual fear memory to predatory threats. de Lima MAX, Baldo MVC, Oliveira FA, Canteras NS. Elife. 2022 Jan 5;11. pii: 67007. doi: 10.7554/eLife.67007. PubMed |
| Selective Enrichment of Munc13-2 in Presynaptic Active Zones of Hippocampal Pyramidal Cells That Innervate mGluR1alpha Expressing Interneurons. Holderith N, Aldahabi M, Nusser Z. Front Synaptic Neurosci. 2022 Feb 10;13:773209. doi: 10.3389/fnsyn.2021.773209. eCollection 2021. PubMed |
| Silencing of amygdala circuits during sepsis prevents the development of anxiety-related behaviours. Bourhy L, Mazeraud A, Costa LHA, Levy J, Rei D, Hecquet E, Gabanyi I, Bozza FA, Chretien F, Lledo PM, Sharshar T, Lepousez G. Brain. 2022 May 24;145(4):1391-1409. doi: 10.1093/brain/awab475. PubMed |
| A Role for Insulin-like Growth Factor 1 in the Generation of Epileptic Spasms in a murine model. Ballester-Rosado CJ, Le JT, Lam TT, Mohila CA, Lam S, Anderson AE, Frost JD Jr, Swann JW. Ann Neurol. 2022 Jul;92(1):45-60. doi: 10.1002/ana.26383. Epub 2022 May 10. PubMed |
| Mild respiratory COVID can cause multi-lineage neural cell and myelin dysregulation. Fernandez-Castaneda A, Lu P, Geraghty AC, Song E, Lee MH, Wood J, O'Dea MR, Dutton S, Shamardani K, Nwangwu K, Mancusi R, Yalcin B, Taylor KR, Acosta-Alvarez L, Malacon K, Keough MB, Ni L, Woo PJ, Contreras-Esquivel D, Toland AMS, Gehlhausen JR, Klein J, Takahashi T, Silva J, Israelow B, Lucas C, Mao T, Pena-Hernandez MA, Tabachnikova A, Homer RJ, Tabacof L, Tosto-Mancuso J, Breyman E, Kontorovich A, McCarthy D, Quezado M, Vogel H, Hefti MM, Perl DP, Liddelow S, Folkerth R, Putrino D, Nath A, Iwasaki A, Monje M. Cell. 2022 Jul 7;185(14):2452-2468.e16. doi: 10.1016/j.cell.2022.06.008. Epub 2022 Jun 13. PubMed |
| Therapeutic deep brain stimulation disrupts movement-related subthalamic nucleus activity in parkinsonian mice. Schor JS, Gonzalez Montalvo I, Spratt PWE, Brakaj RJ, Stansil JA, Twedell EL, Bender KJ, Nelson AB. Elife. 2022 Jul 4;11:e75253. doi: 10.7554/eLife.75253. PubMed |
| Lateral habenula glutamatergic neurons projecting to the dorsal raphe nucleus promote aggressive arousal in mice. Takahashi A, Durand-de Cuttoli R, Flanigan ME, Hasegawa E, Tsunematsu T, Aleyasin H, Cherasse Y, Miya K, Okada T, Keino-Masu K, Mitsui K, Li L, Patel V, Blitzer RD, Lazarus M, Tanaka KF, Yamanaka A, Sakurai T, Ogawa S, Russo SJ. Nat Commun. 2022 Jul 21;13(1):4039. doi: 10.1038/s41467-022-31728-z. PubMed |
| Dynamic control of visually guided locomotion through corticosubthalamic projections. Adam EM, Johns T, Sur M. Cell Rep. 2022 Jul 26;40(4):111139. doi: 10.1016/j.celrep.2022.111139. PubMed |
| Analysis of the distribution of vagal afferent projections from different peripheral organs to the nucleus of the solitary tract in rats. Bassi JK, Connelly AA, Butler AG, Liu Y, Ghanbari A, Farmer DGS, Jenkins MW, Melo MR, McDougall SJ, Allen AM. J Comp Neurol. 2022 Dec;530(17):3072-3103. doi: 10.1002/cne.25398. Epub 2022 Aug 21. PubMed |
| A thalamo-preoptic pathway promotes social grooming in rodents. Keller D, Lang T, Cservenak M, Puska G, Barna J, Csillag V, Farkas I, Zelena D, Dora F, Kuppers S, Barteczko L, Usdin TB, Palkovits M, Hasan MT, Grinevich V, Dobolyi A. Curr Biol. 2022 Nov 7;32(21):4593-4606.e8. doi: 10.1016/j.cub.2022.08.062. Epub 2022 Sep 15. PubMed |
Dual-polarity voltage imaging of the concurrent dynamics of multiple neuron types.
Kannan M, Vasan G, Haziza S, Huang C, Chrapkiewicz R, Luo J, Cardin JA, Schnitzer MJ, Pieribone VA.
Science. 2022 Nov 4;378(6619):eabm8797. doi: 10.1126/science.abm8797. Epub 2022 Nov 4.
PubMed
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| Rostral and caudal basolateral amygdala engage distinct circuits in the prelimbic and infralimbic prefrontal cortex. Manoocheri K, Carter AG. Elife. 2022 Dec 7;11:e82688. doi: 10.7554/eLife.82688. PubMed |
| MRAP2 regulates energy homeostasis by promoting primary cilia localization of MC4R. Bernard A, Ojeda Naharros I, Yue X, Mifsud F, Blake A, Bourgain-Guglielmetti F, Ciprin J, Zhang S, McDaid E, Kim K, Nachury MV, Reiter JF, Vaisse C. JCI Insight. 2023 Jan 24;8(2):e155900. doi: 10.1172/jci.insight.155900. PubMed |
| Ploidy-stratified single cardiomyocyte transcriptomics map Zinc Finger E-Box Binding Homeobox 1 to underly cardiomyocyte proliferation before birth. Bak ST, Harvald EB, Ellman DG, Mathiesen SB, Chen T, Fang S, Andersen KS, Fenger CD, Burton M, Thomassen M, Andersen DC. Basic Res Cardiol. 2023 Mar 2;118(1):8. doi: 10.1007/s00395-023-00979-2. PubMed |
| Cerebellar nuclei neurons projecting to the lateral parabrachial nucleus modulate classical fear conditioning. Hwang KD, Baek J, Ryu HH, Lee J, Shim HG, Kim SY, Kim SJ, Lee YS. Cell Rep. 2023 Apr 25;42(4):112291. doi: 10.1016/j.celrep.2023.112291. Epub 2023 Mar 22. PubMed |
| Activity-dependent regulation of the BAX/BCL-2 pathway protects cortical neurons from apoptotic death during early development. Schroer J, Warm D, De Rosa F, Luhmann HJ, Sinning A. Cell Mol Life Sci. 2023 Jun 3;80(6):175. doi: 10.1007/s00018-023-04824-6. PubMed |
| Dissection of insular cortex layer 5 reveals two sublayers with opposing modulatory roles in appetitive drinking behavior. Takemoto M, Kato S, Kobayashi K, Song WJ. iScience. 2023 May 26;26(6):106985. doi: 10.1016/j.isci.2023.106985. eCollection 2023 Jun 16. PubMed |
| Viral vector-mediated transgene delivery with novel recombinase systems for targeting neuronal populations defined by multiple features. Jeong M, Choi JH, Jang H, Sohn DH, Wang Q, Lee J, Yao L, Lee EJ, Fan J, Pratelli M, Wang EH, Snyder CN, Wang XY, Shin S, Gittis AH, Sung TC, Spitzer NC, Lim BK. Neuron. 2024 Jan 3;112(1):56-72.e4. doi: 10.1016/j.neuron.2023.09.038. Epub 2023 Oct 30. PubMed |
| Separate gut-brain circuits for fat and sugar reinforcement combine to promote overeating. McDougle M, de Araujo A, Singh A, Yang M, Braga I, Paille V, Mendez-Hernandez R, Vergara M, Woodie LN, Gour A, Sharma A, Urs N, Warren B, de Lartigue G. Cell Metab. 2024 Feb 6;36(2):393-407.e7. doi: 10.1016/j.cmet.2023.12.014. Epub 2024 Jan 18. PubMed |
| Functional dynamics and selectivity of two parallel corticocortical pathways from motor cortex to layer 5 circuits in somatosensory cortex. Kim HH, Bonekamp KE, Gillie GR, Autio DM, Keller T, Crandall SR. bioRxiv [Preprint]. 2024 May 20:2024.02.11.579810. doi: 10.1101/2024.02.11.579810. PubMed |
| Prefrontal control of superior colliculus modulates innate escape behavior following adversity. Ritter A, Habusha S, Givon L, Edut S, Klavir O. Nat Commun. 2024 Mar 9;15(1):2158. doi: 10.1038/s41467-024-46460-z. PubMed |
| Adaptation of sequential action benefits from timing variability related to lateral basal ganglia circuitry. Ferguson LA, Matamales M, Nolan C, Balleine BW, Bertran-Gonzalez J. iScience. 2024 Feb 20;27(3):109274. doi: 10.1016/j.isci.2024.109274. eCollection 2024 Mar 15. PubMed |
| Restoration of neuronal progenitors by partial reprogramming in the aged neurogenic niche. Xu L, Ramirez-Matias J, Hauptschein M, Sun ED, Lunger JC, Buckley MT, Brunet A. Nat Aging. 2024 Apr;4(4):546-567. doi: 10.1038/s43587-024-00594-3. Epub 2024 Mar 29. PubMed |
| A prefrontal motor circuit initiates persistent movement. Wang Y, Sun QQ. bioRxiv [Preprint]. 2024 Mar 27:2023.07.11.548619. doi: 10.1101/2023.07.11.548619. PubMed |
| Inputs to the locus coeruleus from the periaqueductal gray and rostroventral medulla shape opioid-mediated descending pain modulation. Lubejko ST, Livrizzi G, Buczynski SA, Patel J, Yung JC, Yaksh TL, Banghart MR. Sci Adv. 2024 Apr 26;10(17):eadj9581. doi: 10.1126/sciadv.adj9581. Epub 2024 Apr 26. PubMed |
| Functional Dynamics and Selectivity of Two Parallel Corticocortical Pathways from Motor Cortex to Layer 5 Circuits in Somatosensory Cortex. Kim HH, Bonekamp KE, Gillie GR, Autio DM, Keller T, Crandall SR. eNeuro. 2024 Jun 21;11(6):ENEURO.0154-24.2024. doi: 10.1523/ENEURO.0154-24.2024. Print 2024 Jun. PubMed |
| A prefrontal motor circuit initiates persistent movement. Wang Y, Sun QQ. Nat Commun. 2024 Jun 19;15(1):5264. doi: 10.1038/s41467-024-49615-0. PubMed |
| Sex-dependent, lateralized engagement of anterior insular cortex inputs to the dorsolateral striatum in binge alcohol drinking. Haggerty DL, Atwood BK. Elife. 2024 Aug 28;13:RP96534. doi: 10.7554/eLife.96534. PubMed |
| LRRTM2 controls presynapse nano-organization and AMPA receptor sub-positioning through Neurexin-binding interface. Liouta K, Lubas M, Venugopal V, Chabbert J, Jeanniere C, Diaz C, Munier M, Tessier B, Claverol S, Favereaux A, Sainlos M, de Wit J, Letellier M, Thoumine O, Chamma I. Nat Commun. 2024 Oct 11;15(1):8807. doi: 10.1038/s41467-024-53090-y. PubMed |
| Hypothalamic regulation of hippocampal CA1 interneurons by the supramammillary nucleus. Jiang YQ, Lee DK, Guo W, Li M, Sun Q. Cell Rep. 2024 Nov 26;43(11):114898. doi: 10.1016/j.celrep.2024.114898. Epub 2024 Oct 23. PubMed |
| Functional properties of corticothalamic circuits targeting paraventricular thalamic neurons. Aquino-Miranda G, Jalloul D, Zhang XO, Li S, Kirouac GJ, Beierlein M, Do Monte FH. Neuron. 2024 Dec 18;112(24):4060-4080.e7. doi: 10.1016/j.neuron.2024.10.010. Epub 2024 Nov 5. PubMed |
Long-range regulation of transcription scales with genomic distance in a gene-specific manner.
Jensen CL, Chen LF, Swigut T, Crocker OJ, Yao D, Bassik MC, Ferrell JE Jr, Boettiger AN, Wysocka J.
Mol Cell. 2025 Jan 16;85(2):347-361.e7. doi: 10.1016/j.molcel.2024.10.021. Epub 2024 Dec 2.
PubMed
Associated Plasmids |
| A cell type-specific mechanism driving the rapid antidepressant effects of transcranial magnetic stimulation. Gongwer MW, Qi A, Enos AS, Rueda SA, Klune CB, Shari M, Kashay AQ, Williams OH, Hacking A, Riley JP, Wilke GA, Yang Y, Lu H, Leuchter AF, DeNardo LA, Wilke SA. bioRxiv [Preprint]. 2025 Jan 30:2025.01.29.635537. doi: 10.1101/2025.01.29.635537. PubMed |
| Binocular processing facilitates escape behavior through multiple pathways to the superior colliculus. Broersen R, Thompson G, Thomas F, Stuart GJ. Curr Biol. 2025 Mar 24;35(6):1242-1257.e9. doi: 10.1016/j.cub.2025.01.066. Epub 2025 Feb 20. PubMed |
| Translational research approach to social orienting deficits in autism: the role of superior colliculus-ventral tegmental pathway. Contestabile A, Kojovic N, Casarotto G, Delavari F, Hagmann P, Schaer M, Bellone C. Mol Psychiatry. 2025 Aug;30(8):3729-3739. doi: 10.1038/s41380-025-02962-w. Epub 2025 Apr 5. PubMed |
| Neural Networks of the Mouse Primary Visceromotor Cortex. Dong HW, Hintiryan H, Zhu M, Zhao P, Zhang M, Barry J, Nanda S, Rudd M, Wong A, Miller S, Gou L, Wei J, Zingg B, Sun J, Gutierrez A, Mun HS, Bowman I, Garcia L, Lo D, Boesen T, Cao C, Zhao Q, Foster N, Moradi K, Yamashita S, Estrada C, Dev A, Gonzalez J, Xu H, Yang G, Park C, Yang X, Levine M, Zhang L, Micevych P, Cepeda C, Golshani P, Hong W, Yang Y. Res Sq [Preprint]. 2025 Apr 28:rs.3.rs-4125909. doi: 10.21203/rs.3.rs-4125909/v1. PubMed |
| Sex-specific perturbations of neuronal development caused by mutations in the autism risk gene DDX3X. Mossa A, Dierdorff L, Lukin J, Garcia-Forn M, Wang W, Mamashli F, Park Y, Fiorenzani C, Akpinar Z, Kamps J, Tatzelt J, Wu Z, De Rubeis S. Nat Commun. 2025 May 15;16(1):4512. doi: 10.1038/s41467-025-59680-8. PubMed |
| A ventral hippocampal-lateral septum pathway regulates social novelty preference. Rashid M, Thomas S, Isaac J, Karkare SC, Klein H, Murugan M. Elife. 2025 Jun 4;13:RP97259. doi: 10.7554/eLife.97259. PubMed |
| Directed cell-type recruitment during consolidation of a remote memory. Zeidler Z, Yu AL, Seong MP, Hundley R, DeNardo LA. bioRxiv [Preprint]. 2025 Jun 15:2025.06.13.659562. doi: 10.1101/2025.06.13.659562. PubMed |
| Organization of Brainwide Inputs to Discrete Lateral Septum Projection Populations. Isaac J, Karkare SC, Balasubramanian H, Murugan M. J Neurosci. 2025 Sep 10;45(37):e0797252025. doi: 10.1523/JNEUROSCI.0797-25.2025. PubMed |
| A circuit from the basolateral amygdala to hippocampal CA3 regulates social behavior. Li M, Jiang YQ, Sun Q. Curr Biol. 2025 Sep 22;35(18):4349-4364.e5. doi: 10.1016/j.cub.2025.07.059. Epub 2025 Aug 20. PubMed |
| Activity-dependent localization and dynamics of STIM1 and STIM2 at ER-PM contacts in hippocampal neurons. Chhikara A, Maciag F, Sorusch N, Heine M. Cell Rep. 2025 Oct 28;44(10):116290. doi: 10.1016/j.celrep.2025.116290. Epub 2025 Sep 16. PubMed |
| Morphological and electrophysiological diversity and connectivity of principal neurons in the lateral and basal nuclei of the mouse amygdala. Reeb Z, Magyar D, Weisz F, Fekete Z, Muller K, Vikor A, Peterfi Z, Andrasi T, Veres JM, Hajos N. Sci Rep. 2025 Sep 29;15(1):33675. doi: 10.1038/s41598-025-18411-1. PubMed |
| Central Osmolality Sensing for Arginine Vasopressin Release Is Mediated by WNK1-OSR1/SPAK-Kv3.1 Cascade. Jin X, Xie J, Yeh CW, Li YJ, Lien CC, Huang CL. FASEB J. 2025 Nov 30;39(22):e71213. doi: 10.1096/fj.202502072RR. PubMed |
| Medial prefrontal cortex activity precedes dorsomedial striatum in need for change during history-based flexible behavior. Koszeghy A, Xu W, Liu M, Lu P, Wan L, Deng T, Kang S, Series P, Gan J. iScience. 2025 Oct 31;28(12):113913. doi: 10.1016/j.isci.2025.113913. eCollection 2025 Dec 19. PubMed |
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