Inducible Caspex expression Citations (12)
Originally described in: Discovery of proteins associated with a predefined genomic locus via dCas9-APEX-mediated proximity labeling.Myers SA, Wright J, Peckner R, Kalish BT, Zhang F, Carr SA Nat Methods. 2018 May 7. pii: 10.1038/s41592-018-0007-1. doi: 10.1038/s41592-018-0007-1. PubMed Journal
Articles Citing Inducible Caspex expression
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| p53 Integrates Temporal WDR5 Inputs during Neuroectoderm and Mesoderm Differentiation of Mouse Embryonic Stem Cells. Li Q, Mao F, Zhou B, Huang Y, Zou Z, denDekker AD, Xu J, Hou S, Liu J, Dou Y, Rao RC. Cell Rep. 2020 Jan 14;30(2):465-480.e6. doi: 10.1016/j.celrep.2019.12.039. PubMed |
| Role for carbohydrate response element-binding protein (ChREBP) in high glucose-mediated repression of long noncoding RNA Tug1. Long J, Galvan DL, Mise K, Kanwar YS, Li L, Poungvarin N, Overbeek PA, Chang BH, Danesh FR. J Biol Chem. 2020 May 28. pii: RA120.013228. doi: 10.1074/jbc.RA120.013228. PubMed |
| PAX3-FOXO1 coordinates enhancer architecture, eRNA transcription, and RNA polymerase pause release at select gene targets. Zhang S, Wang J, Liu Q, McDonald WH, Bomber ML, Layden HM, Ellis J, Borinstein SC, Hiebert SW, Stengel KR. Mol Cell. 2022 Dec 1;82(23):4428-4442.e7. doi: 10.1016/j.molcel.2022.10.025. Epub 2022 Nov 16. PubMed |
The PROTECTOR strategy employs dCas orthologs to sterically shield off-target sites from CRISPR/Cas activity.
Sapozhnikov DM, Szyf M.
Sci Rep. 2023 Feb 9;13(1):2280. doi: 10.1038/s41598-023-29332-2.
PubMed
Associated Plasmids |
| The tumor suppressor p53 is a negative regulator of the carcinoma-associated transcription factor FOXQ1. Pizzolato G, Moparthi L, Pagella P, Cantu C, D'Arcy P, Koch S. J Biol Chem. 2024 Apr;300(4):107126. doi: 10.1016/j.jbc.2024.107126. Epub 2024 Mar 1. PubMed |
An activity-specificity trade-off encoded in human transcription factors.
Naderi J, Magalhaes AP, Kibar G, Stik G, Zhang Y, Mackowiak SD, Wieler HM, Rossi F, Buschow R, Christou-Kent M, Alcoverro-Bertran M, Graf T, Vingron M, Hnisz D.
Nat Cell Biol. 2024 Aug;26(8):1309-1321. doi: 10.1038/s41556-024-01411-0. Epub 2024 Jul 5.
PubMed
Associated Plasmids |
TurboCas: A method for locus-specific labeling of genomic regions and isolating their associated protein interactome.
Cenik BK, Aoi Y, Iwanaszko M, Howard BC, Morgan MA, Andersen GD, Bartom ET, Shilatifard A.
Mol Cell. 2024 Dec 19;84(24):4929-4944.e8. doi: 10.1016/j.molcel.2024.11.007.
PubMed
Associated Plasmids |
| Coupling Proximity Biotinylation with Genomic Targeting to Characterize Locus-Specific Changes in Chromatin Environments. Kougnassoukou Tchara PE, Loehr J, Lambert JP. J Proteome Res. 2025 Apr 4;24(4):1845-1860. doi: 10.1021/acs.jproteome.4c00931. Epub 2025 Mar 7. PubMed |
| MSH2 is not required for either maintenance of DNA methylation or repeat contraction at the FMR1 locus in fragile X syndrome or the FXN locus in Friedreich's ataxia. Grant-Bier J, Ruppert K, Hayward B, Usdin K, Kumari D. Epigenetics Chromatin. 2025 Apr 28;18(1):24. doi: 10.1186/s13072-025-00588-4. PubMed |
Probing condensate microenvironments with a micropeptide killswitch.
Zhang Y, Stoppelkamp I, Fernandez-Pernas P, Allram M, Charman M, Magalhaes AP, Piedavent-Salomon M, Sommer G, Sung YC, Meyer K, Grams N, Halko E, Dongre S, Meierhofer D, Malszycki M, Ilik IA, Aktas T, Kraushar ML, Vastenhouw N, Weitzman MD, Grebien F, Niskanen H, Hnisz D.
Nature. 2025 Jun 4. doi: 10.1038/s41586-025-09141-5.
PubMed
Associated Plasmids |
| LncRNA CISTR-ACT regulates cell size in human and mouse by guiding FOSL2. Kiriakopulos K, Soleimanpour K, McMurray BJ, Moke BI, Chalmers JJ, Mokhtaridoost M, Newton JD, De Young T, Delfosse K, Ahmed M, Wong CJ, Stricker S, Li Y, Nieman BJ, Gingras AC, Justice MJ, Lefebvre JL, Maass PG. Nat Commun. 2025 Dec 16;17(1):872. doi: 10.1038/s41467-025-67591-x. PubMed |
| Overcoming the eIF2alpha Brake in Human Cell-Derived Translation Systems. Aleksashin NA, Shelke RR, Yin T, Cate JHD. bioRxiv [Preprint]. 2025 Dec 7:2025.11.16.688697. doi: 10.1101/2025.11.16.688697. PubMed |
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