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We narrowed to 119 results for: Cre expression vector

Showing: 1 - 50 of 119 results
  1. A Practical Guide to Optimizing AAV DIO and FLEx Vector Expression

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    ...with AAV DIO/Flex vectors and leaky expression can occur in cells that don’t express Cre or Flp, what can...can be expressed in cells where Cre is absent. Additionally, we have experienced that some vectors are much...using DIO/FLEx vectors for off-target expression.  Some classes of neurons transiently express TH during development... require gene expression in a specific cell type rely on transgenic models that express recombinases like... like Cre or Flp in their cells of interest and recombinase-dependent AAV vectors for selective transgene... is off-target or spurious expression of recombinase-dependent AAV vectors. In this article, we will discuss...off-target expression and ways to optimize experiments to minimize it. Overview of DIO/FLEx vector design ...
  2. Top Requested AAV of 2017: pmSyn1-EBFP-CRE

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    ...inject your Cre-dependent mCherry mouse with the pmSyn-EBFP-Cre AAV. Because Cre expression is controlled... can be used to drive Cre expression specifically in neurons. AAV Delivered Cre - A useful tool for neuroscientists... could breed your Cre-dependent mCherry line with a separate line that expresses Cre in neurons, but both...pmSyn1-EBFP-Cre and other viral vector tools in the years to come. We’ll make many more viral vector tools ...We began distributing ready-to-use virus preps through our viral service in late 2016 and requests are...popular form), this viral vector is used to deliver DNA encoding Cre recombinase under the control of the...control where your gene of interest is expressed.  A cell-type specific Cre can provide you with that control...
  3. Advanced Uses of Cre-lox and Flp-FRT - A Neuroscientist’s View

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    ...transfected with both vectors. Flex vectors are the solution. Flex vectors expressing fluorescent cytoplasmic...control FLP and Cre expression have been developed. Read on to learn more about FLP-FRT, Cre-lox, and how... FLEx vectors expressing the light activatable ion channel under the control of Cre recombinase are used...concentrations of vectors expressing the required recombinase. The high concentration of FLEx vectors guarantees...This post was contributed by guest blogger Katrin Michel. Cre-lox is an incredibly popular and powerful...control without modification - either Cre is there or it’s not. Cre-mediated possibilities for site specific...and expressing it from a CAGGs promoter. However FLPe is still less efficient than Cre recombinase. FLPe...
  4. Cre-Lox and Other Site-Specific Recombinases

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    ... plasmids expressing Cre recombinase and filter the results by expression system and vector type. Find...or control gene expression or skip ahead to browse highlighted plasmids expressing Cre , Flp , Dre , other...Summary of Cre, Dre, and Flp Recognition Sites. Controlling Recombinase Expression By expressing the enzyme...interest will prevent gene expression in the absence of Cre. In the presence of Cre, the stop codon is excised...lox-STOP-lox shRNA constructs, Cre expression promotes shRNA expression. Gene Switch: These constructs...Genes A and B. When Cre is absent, only Gene A is translated correctly. Cre expression excises Gene A and...double-crossover event. Toxicity Cre-lox recombination is a very useful tool, but Cre expression can be toxic in some...
  5. Plasmids 101: The protein expression toolbox

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    ...permanently induce expression? Check out our Retro expression vector and Lenti expression vector. Turn it on...protein expression. If you need the ability to control when you turn off expression for good, the Cre-Lox...knock out plasmids? Check out our Cre vector and Murine LoxP vector.   Turn it off for a little while ...induce expression? Check out Addgene's Lentiviral dCas9 SAM vector and Piggybac dCas9 SAM vector! On/off...inducible expression (more on this below) will both achieve temporary repression of protein expression. Addgene...appropriate promoter to express your cDNA, depending on the level of expression you would like. Check out...Addgene's Lentiviral dTAG cloning vector and SMASh degron tagging vector! Destabilizing domains Destabilizing...
  6. FLEx Technology and Optogenetics: Flipping the switch on gene expression with high spatial and temporal resolution

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    ...optogenetic FLEx vectors in combination with transgenic animals or rAAVs expressing Cre under a specific...cells with an inactive opsin gene; in Cre expressing cells, however, Cre induces the recombination of the ...enable strong opsin expression in specific neuronal cells? This can be achieved using Cre-dependent viruses...FLEx-based vectors to study the neural circuitry behind the mechanisms of sleep and anesthesia. In Cre transgenic...reversible modulation of FLEx vectors combined with the use of several Cre transgenic mice targeting different...not naturally light-sensitive, so the selective expression of opsin genes in targeted cells makes it possible...How to get an opsin into the brain In order to express opsins within the brain, researchers inject genetically...
  7. Synthetic promoter AAVs for cell-type specific expression in retinal cells

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    ...promoter to drive expression of Cre-mCherry and a second promoter to drive expression of a Cre-dependent fluorescent...reporter. Expression of GFP will only result in cells where Cre-mCherry is also expressed. If Cre-mCherry...Cre-mCherry expresses in photoreceptors and horizontal cells, and Cre-dependent-GFP expresses in horizontal cells...to test for cell type-specific expression of GFP. Half (113) expressed in retinal cells four weeks post-injection...More than 90% of expression occurred in one type of cell More than 50% of expression occurred in one type...of targeted expression. Surprisingly, <1% of synthetic promoters replicated the expression specificity...restrict expression to a single cell type based on the overlap in cell types both promoters expressed in. ...
  8. Evolution of Brainbow: Using Cre-lox for Multicolor Labeling of Neurons

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    ... how Cre-lox recombination works. Advances in Cre-lox recombination have included inducible Cre, such...membrane tethered cyan). Without Cre recombination, RFP is expressed. Cre can mediate one of two deletions... construct, OFP (orange), is expressed when Cre is absent; stochastic Cre excision results in one of three...remaining cassette can invert as long as Cre remains expressed; once Cre is removed from the system, the fluorescent...transgenes and Cre, Cai et al. also created an Autobow construct containing both Cre and XFPs. Cre production...CRISPR-Cas9 genome editing may be the hot new way to manipulate gene expression, but other gene manipulation...temporally control gene expression, especially in in vivo models, and new Cre-lox based technologies are...
  9. Popular Retroviral Vectors and Their Uses in Scientific Research

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    ... handling and expression of these vectors when used in experiments. Retroviral vectors make up a large...Transfer Vectors   Expressing your gene of interest pMKO.1 GFP (Plasmid #10676) Retroviral vector for cloning...cloning and expressing your gene of interest with GFP expression.  Cloning and expressing RNAi pMKO.1 ...Tools for RNAi! Cre-Lox technology CAG-GFP-IRES-CRE (Plasmid #48201) This retroviral vector from the Gage...interest. Lentiviral vectors Popular Lentiviral Transfer Vectors    Expressing your gene of interest ...lentiviral vector backbone from the Shih lab. You can find more lentiviral expression vectors (empty backbones...to use the pLKO.1 vector can be found here. Cre-Lox technology Puro.Cre empty vector (Plasmid #17408)   ...
  10. Plasmids 101: FLEx Vectors

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    ...cassette that will express GeneR only in the presence of Cre. In this example, Cre would first invert ...tissue-specific Cre is provided. Since the FLEx switch ensures Cre-dependent reporter expression, the potential...: In the presence of Cre, GFP expression is lost, allowing for rescued expression of GeneR.   Sometimes...elements to turn off expression of one gene, while simultaneously turning on the expression of another! What...FLEx switch that turns BFP expression off, while turning on mCherry expression. For this FLEx switch to ... switch will express BFP in the absence of, or mCherry in the presence of Cre recombinase.   Once ...in the presence of Cre recombinase. This plasmid now specifically drives expression of mCherry instead...
  11. AAVs CREATed for Gene Delivery to the CNS and PNS

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    ... cell-type-specific Cre, the polyA sequence is inverted only in the Cre-expressing tissues. This inversion.... By using this library to infect an animal expressing Cre in a cell type of interest, a scientist can...labeling is to inject a mix of AAV vectors that constitutively express a red, green, or blue (RGB) fluorescent...blue are the predominate colors expressed (figure 4c).   AAV Vector  Percent of Neurons Transduced   ... color expression into a two part system (figure 4d):  Part 1: A cocktail of three AAV vectors expressing...using AAV as a tool for gene expression in mammals. Subscribe to Viral Vector Blog Posts Additional Resources...   Adeno-associated viral (AAV) vectors are the most frequently used gene-transfer tools in the study...
  12. New and Upcoming Viral Vectors - May 2020

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    ...preps for expressing SARS-CoV-2 proteins ChR2 for targeted expression DREADDs GFP dependent Cre and FLPo...preps SARS-CoV-2 protein expression The Krogan lab quickly shared plasmids expressing SARS-CoV-2 proteins ...2xStrep-IRES-Puro: Expression of the SARS-CoV-2 ORF3a Lentiviral preps for expressing the E protein (pLVX-EF1alpha-SARS-CoV...serotypes, as well as a new Cre dependent GFP control plasmid for expression in forebrain GABA-ergic interneurons...for targeted expression. Plasmid 75470 is now available in AAV1 for Flp-dependent expression of ChR2(H134R...dependent Cre. The two segments come together in the presence of GFP to form a functional Cre enzyme that...GFP expression patterns, thus allowing you to further restrict gene activation to cells expressing both...
  13. New Viral Vectors - Fall 2024

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    ...Armamentarium Collection. These preps drive expression of either Cre recombinase or a fluorescent marker in the various...AAV-GfaABC1D-Cre-4x6T AAV5 Recombinases Stanley Thomas Carmichael New viral prep pAAV-EF1a-fDIO-Cre AAV5 ...the 34 new preps available in the Addgene viral vector repository! This includes the first Addgene prep...X1.1 serotype.  In rodents, AAV9-X1.1 enables expression in brain endothelial cells via an injection into...actually targets neurons, and has 45-fold higher expression levels compared to AAV9. You can now target these... AAV9-X1.1!  We also have eight new AAV-PHP.eB vectors from the Jonathan Ting lab at the Allen Institute...carried out before. We have a bunch of other new AAV vectors as well — including next-generation biosensors ...
  14. New and Upcoming Viral Vectors - September 2019

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    ...Flp-dependent Cre AAV in AAV9 and AAVrg. See our new additions here: Cre vectors pAAV-EF1a-fDIO-Cre (121675...directs strong, ubiquitous expression. This is a Cre-dependent switch that expresses nuclear mCherry in the...the absence of Cre, and expresses nuclear EGFP in the presence of Cre. Biosensor AAV (calcium sensors ...ubiquitous expression. pAAV-mDlx-NLS-mRuby2 (99130-AAVrg): The Dlx element directs expression in forebrain...pENN.AAV.hSyn.Cre.WPRE.hGH (105553-AAV5) Dre vector AAV phSyn1(S)-DreO-bGHpA (50363-AAV5) Flp vectors pAAV-EF1a-mCherry-IRES-Flpo...pAAV-EF1a-Flpo (55637-AAV1) Viral vectors coming soon! These vectors should be packaged and available ... of our viral vectors blog posts Find tips for preparing AAVs Download our viral vectors 101 eBook Resources...
  15. Viral Vectors 101: The AAV Retrograde Serotype

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    ...by injecting a Cre-dependent AAV into Broca’s area of a mouse specifically expressing Cre in the hippocampus...your system. Chemogenetic vectors  Expression of retrograde serotype vectors is present at both the injection...phenomenon is to use a retrograde recombinase-expressing vector (e.g. Cre or FLP) to transduce the projection pathway...However, the Cre-dependent AAV cargo would only become activated in the presence of Cre recombinase, which ...-dependent vectors, this can cause challenges for the experimental design as these vectors can exhibit...tracing, but often at the cost of toxicity, low expression, or poor scalability.  Scientists at Janelia ...infects neurons, directs high-level transgene expression, and has retrograde functionality to monitor ...
  16. Deciphering the Mysteries of Behavior with Viral Vectors

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    ...researchers injected Cre-expressing AAV-5 into the DRN of a transgenic mouse harbouring a Cre-dependent IL-1... particles into a Drd1-Cre transgenic mouse to deliver Cre-dependent expression of  Channelrhodopsin 2...-1 beta overexpression cassette. Expression of Cre in these neurons turns on overexpression of IL-1 beta.... Addgene has several recombinase-expressing ready-made AAV vectors which can be used in numerous floxed...researchers found that injecting lentiviral vectors expressing BDNF in the hippocampus causes a shift towards...studies using viral vectors in behavioral neuroscience. With the ability of viral vectors to fine tune gene...all of our viral vectors blog posts Find tips for getting started with viral vectors for behavioral neuroscience...
  17. New and Upcoming Viral Vectors - Spring 2019

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    ...restricts expression to GABAergic interneurons. These vectors can also be used as the control vectors for experiments...and control AAV These fluorescent protein expression vectors can be used to visualize cells and to quantify...pAAV-hSyn-mCherry at Addgene. Viral vectors coming soon! These vectors listed below should be released at...DreO-bGHpA 121675  AAV9  pAAV-EF1a-fDIO-Cre (FLP-dependent CRE) 55634  AAV1  pAAV-EF1a-mCherry-IRES-... of our viral vectors blog posts Find tips for preparing AAVs Download our viral vectors 101 eBook Resources...new tools to our inventory of ready-to-use viral vectors. Here are some of the AAV we have released so far... constitutive (pAAV-Syn-Archon1-KGC-GFP-ER2) and cre-dependent version (pAAV-Syn-FLEX-rc [Archon1-KGC-...
  18. Viral Vectors 101: Parts of the AAV Transfer Plasmid

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    ... of expression. For example, CAG is a strong promoter that drives very high, ubiquitous expression, while... with the Cre recombinase, are used to spatially and temporally control transgene expression. Lox sites...DIO. Lox sites are recognized by the recombinase Cre. Cre first flips the sequence between the first pair...outside of the ITRs does not get packaged in the AAV vector. The cloning capacity between the ITRs is ~4.4 ...of interest. Promoter The promoter drives the expression of the AAV transgene. On a plasmid map, promoters...type-specific, which can help you restrict the expression of your transgene to a specific species or location...flipped transgene. By restricting the availability of Cre, lox sites lets researchers control the spatial and...
  19. Viral Vectors 101: An Introduction to AAV

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    ...cell-specific gene expression and viral infection. Cre or Flp dependent switches control gene expression via switches...(scAAV) vector. Full-length ssAAV vector genome of both polarities are rescued from the vector plasmid...re interested in expressing multiple small genes, you can design single rAAV vectors with multiple genes... to co-express them from one promoter. Specificity The ability of AAV to drive gene expression in specific...transgene expression, since you don’t have to wait for the host to replicate the DNA before expression. Now..., and Constance Cepko. "Distinct expression patterns of AAV8 vectors with broadly active promoters from...about Viral Vector Elements Resources on Addgene.org Read Our AAV Guide Find AAV Vectors Browse All ...
  20. Hot Plasmids Spring 2024

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    ... A cis-splicing vector served as positive control (cis-ctrl). v1, vector 1; v2, vector 2; BD, binding ...SARS-CoV-2 research New viral vector preps of Voltron2 voltage sensors AAV vectors for targeting microglia ... offers vectors for CROPseq-multi using selection by Puromycin, Zeocin®, or nuclear expression of BFP2...voltage sensors By Brian O’Neill New viral vector preps expressing the Voltron2 voltage indicator, created...Ace2N-mNeon-A122D and Voltron2 are available as Cre-dependent AAV1 vectors and are suitable for extended imaging...high microglia-specific gene expression when incorporated in an AAV vector (Figure 5). Efficiency and specificity...of miR124T was inserted into the vector to silence transgene expression in neurons and other non-microglia...
  21. New and Upcoming Viral Vectors - June 2019

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    ...with Cre for intersectional control of specific neuronal populations. We now offer a Flp-expressing AAV...AAV, as well as a Cre-dependent Flp-expressing AAV. See our recombinase AAV inventory here New recombinases...AAV1 pAAV-ihSyn1-DIO-tTA Viral vectors coming soon! These vectors listed below should be released at... of our viral vectors blog posts Find tips for preparing AAVs Download our viral vectors 101 eBook Resources...new tools to our inventory of ready-to-use viral vectors. Here are some of the AAV we have released in the...detection PSAM4 GlyR for chemogenetic inhibition Flp expression for intersectional studies And more! Control...Recombinase AAV Finally, we are excited to add Flp-expression AAV to our recombinase AAV inventory. Flp is ...
  22. Mouse Modeling, Part 1: Genetically Engineered Mice

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    ...the Esr1 domain that blocks Cre expression. Then, Cre is expressed and Cre-mediated recombination of floxed...that regulates Cre expression. The most common drug used to induce the expression of Cre is tamoxifen. .... In tamoxifen-inducible Cre (Cre-ER) systems, Cre is fused to the ligand binding domain of estrogen receptor...doxycycline mediated activation of Cre to either induce or repress Cre expression using TetON or TetOFF systems... alters or eliminates the expression of a particular gene. Targeting vectors used to create knockout mice...knockout/knockin mice, use the Cre-lox recombination system to express the transgene in specific cells...targeting vector, creating the floxed gene segment. Crossing of mice containing a floxed gene to a Cre-expressing...
  23. Pairing CombiGEM and CRISPR for Combinatorial Genetic Screening

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    ...This post was contributed by guest blogger Alan Wong. The complexity of biological systems can hinder...multiplexed gRNA expression (Wong et al., 2016), in addition to the combinatorial expression of other genetic...CombiGEM lentiviral vector backbone pAWp12 (Figure 2). Cloning from the pAWp28 storage vector to the pAWp12 ...below and pool-clone them into the pAWp28 storage vector (Figure 1): Forward oligo: 5’- CACCGNNNNNNNNNNNNNNNNNNNGTTTGGGTCTTCGAGAAGACCTATTCXXXXXXXXC...barcode, respectively. Once cloned into the storage vector, the pooled, barcoded gRNA library is now ready...pAWp12 lentiviral vector should retain the diversity in your gRNA library, but this should be verified by NGS...
  24. Tips for Screening with Yeast Two Hybrid Systems

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    ...Yeast Expression Vectors Find Bacterial Two Hybrid Plasmids Read our Blog Post About Yeast Vectors Read...Two hybrid systems were developed in Saccharomyces cerevisiae in 1989 and are still used extensively ...During this period, proteins were successfully expressed as fusions that retain their individual activities...see Figure 2a) (4). These fusions are then co-expressed in a yeast strain that also contains a reporter...bait”, Figure 2b) cannot activate reporter gene expression on its own, but, if the two POI’s interact, this...the promoter of the reporter gene to activate expression (Figure 2c). The reporter gene then allows detection...strains are used to select for binding-dependent expression of the HIS3 gene, which is required for histidine...
  25. Kazuhiro Oka Lentiviral Vectors

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    ...Collections Gene Vector Core Viral Vectors Gene Vector Core Viral Vectors Lentiviral Transfer Vectors Adenoviral...pCDH-CB-copGFP-T2A-iCre 72256 Expresses copGFP and iCre under from the CB promoter pCDH-CB-iCre 72257 Express iCre ... pAdx-CMV-iCre-p2A-copGFP 73350 Expresses iCre and EGFP from the CMV promoter pAdx-CMV-iCre-P2A-tdTomato... transfer vectors and generating new viral vectors. Download the Lentivirus Transfer Vector Production...Lentiviral Vector ID Purpose pCDH-EF1-DIO-copGFP 72253 Expresses copGFP under EF-1 promoter when Cre is expressed...by another vector pCDH-EF1-DIO-tdTomato 72254 Expresses tdTomato under EF-1 promoter when Cre is expressed...expressed by another vector pCDH-CB-iCre-P2A-tdTomato-T2A-Puro 72255 Cre is coexpressed with tdTomato and ...
  26. Viral Vectors 101: Systemic Capsids

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    ... be paired with Cre-expressing transgenic mouse lines to restrict transgene expression to specific tissues...recall, are the outer shell of an AAV vector, which determine the vector’s tropism, including its ability to...used to prevent expression in cell types not of interest. Systemic capsids packaging Cre-dependent transgenes...all take up precious cargo space in AAV vectors. Dual expression systems, which use two or more AAVs to...payloads. Since most systemic vectors are primarily derived from AAV9, the vectors have to be administered ...on the Addgene blog Viral Vectors 101: AAV Variables That Matter Viral Vectors 101: An Introduction to ...Selection of an Efficient AAV Vector for Robust CNS Transgene Expression. Molecular Therapy - Methods ...
  27. The AAVantages of AAV in CRISPR Screens

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    ...large packaging capacity and stable expression of lentiviral vectors make them an attractive option. However...using different types of AAV. Expression Another advantage of AAV vectors is how the cargo — in this case...multi-plasmid system, where you have one AAV vector dedicated to expressing Cas9, while the other houses the gRNA...However, safety requirements and expression limitations may be too constraining for some experiments, ... particularly in vivo ones. In those cases, AAV vector screens may be AAVantageous!       In vivo, in ...delivery method for in vivo CRISPR screens. AAV vectors can be made at high titers equal to those achieved...improved safety profile, customization, and enhanced expression in many mouse tissues. Safety AAV and lentivirus...
  28. Custom CRISPR Screens & the Green Listed Software

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    ...screens Differentially expressed genes  As the costs for global gene expression analyses like RNAseq are...test which of the differentially expressed genes found in a gene expression dataset are causal for a phenotype...differentially expressed genes that are known drug targets, or all differentially expressed genes that code... This post was contributed by guest blogger Fredrik Wermeling, leader of a research group at the Centrum...sequencing to identify which gRNAs are differentially expressed in the separate groups and, as a consequence, ...CRISPR screens designed to target differentially expressed genes can be the next stage in making sense of...interactions to a large extent involve receptors expressed on the cell surface. Thus, a screen can be used...
  29. Plasmids 101: Blue-white Screening

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    ...operon repressor, thereby allowing lac expression). When expressed, the β-galactosidase enzyme can break... methods. Positive selection vectors encode a gene which, when expressed, is lethal to the cell. Cloning...screening overview blog post.) *Note: Two Popular Vectors for Blue White Screening Available at Addgene Are... that encodes for the enzyme β-galactosidase. Expression of the lac operon is induced by lactose, and ... plasmid, creating an α-complementation cloning vector. When a cloning reaction goes to plan and your ...enough time for any intact β-galactosidase to be expressed and process x-gal into blue pigment (16-20 hours...pUC18 and pUC19, and pBluescript are a few common vectors. Blue-white screening is just that – a screening...
  30. New Tools Enable CRISPRa for Neuroscience Applications

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    ... or by mating with Cre-expressing mice. Figure 1: (A) Schematic of the Cre-dependent SPH construct... (i.e., how many sgRNA expression cassettes will fit). Cre-dependent expression of the SPH activator paired... ubiquitous expression of sgRNA(s) and mCherry (vector 1) with neuron-specific expression of dCas9-VPR...construct). More importantly, the expression of this construct is Cre-dependent, enabling spatiotemporal...spatiotemporal control over its expression. Constitutive or inducible Cre recombinases can be introduced by AAV or...generating the SPH mouse. (B) AAV plasmids used to express CRE under neuron-specific promoters (aCaMKII and ...populations.  The Yang Lab’s AAV plasmids used to express Cre under neuron-specific promoters, including calmodulin-dependent...
  31. Plasmids 101: Knockout/Knock-In Plasmids

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    ...Resources on Addgene.org Find Mammalian Expression Vectors Find Cre-Lox Plasmids Learn More about CRISPR ...: A knockout targeting vector designed to insert a resistance gene. The vector contains a neomycin resistance...the addition of Cre recombinase (Figure 2). Figure 2: A knockout targeting vector designed to insert...using Cre recombinase. If GFP is under control of an endogenous promoter, you can use expression GFP to...often use the Cre/Lox system described earlier. In this case, you design your targeting vector such that ... homologous sequence using a specially designed vector that contains sequence homology to the locus of... of the targeted gene have been cloned into the vector on either side of an antibiotic resistance gene...
  32. Getting Started with Behavioral Neuroscience: Standardizing Experiments and Using Viral Vectors

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    ... gene is cloned into a viral shRNA expression vector and the vector particles are delivered into the brain...or lentiviral vectors in our previous blog posts.  Viral vector injection Viral vectors allow a tight ...using viral vectors By modulating neuronal gene expression and activity, you can use viral vectors to study...modification? and 2. Which viral vector should be used? Modifying gene expression Generally speaking, one may...can also reduce expression levels of certain genes. A popular method uses Cre recombinase on transgenic .... On the other hand, lentiviral vectors are superior packaging vectors for larger genes - they can hold...around 1012-1013 vg/ml (vector genomes per milliliter) and lentiviral vectors around 108 IU/ml (infectious...
  33. Performing In Vivo CRISPR Screens Using the FITS Approach

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    ...feature of this system is a lentiviral gRNA expression vector (pRDA_526) that (1) enables efficient knockout...model in vivo. In this screen, we used the pRDA_526 vector to knock out 30 genes putatively involved in CD8...robustness of the system and utility of the pRDA_526 vector. Moreover, the screen identified putative novel...
  34. New and Upcoming Viral Vectors - December 2019

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    ...pAAV.hSynapsin.SF-iGluSnFR.A184S Viral vectors coming soon! These vectors should be packaged and available ... of our viral vectors blog posts Find tips for preparing AAVs Download our viral vectors 101 eBook Resources...new tools to our inventory of ready-to-use viral vectors. Here are some of the AAV we have released in the...pAAV-hSyn Con/Fon hChR2(H134R)-EYFP that is both Cre and Flp dependent. Plasmid Serotype Name 124603...only interpret their results, but also confirm expression in target cells. While the various AAV serotypes... can be used to achieve different patterns of expression, researchers often need to determine these transduction...under control of the CAG promoter for ubiquitous expression. (For more details on this technology, see our...
  35. Viral Vectors 101: Calcium Sensors

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    ...mammalian cell expression, and compatible with constitutive or Cre-dependent expression. These sensors...blog  Viral Vectors 101: Biosensors Viral Vectors 101: Viral Applications Viral Vectors 101: An Introduction... for neuron-specific expression (hSyn promoter) and pan-mammalian cell expression (CAG promoter). An improved...jGCaMP7 and jGCaMP8.   Viral vectors So, what do viral vectors have to do with all of these cool ...also already packaged into viral vectors and ready to go. Pro tip: Vectors with ready-to-use AAV preparations...can be more difficult due to variance in sensor expression if you aren’t working with a stably integrated...named CaMPARI2 is available for neuron-specific expression in both zebrafish and mammalian systems. The ...
  36. Plasmids 101: Screening Strategies Used in Plasmid Cloning

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    ...bacteria that have taken up this vector, but it won’t tell you whether the vector contains the gRNA insert or...X-gal allows you to identify cells that took up the vector and distinguish between plasmids that contain the...𝛽-galactosidase. Complementing this mutation by expressing this deleted portion, for example on a plasmid...functional 𝛽-galactosidase. Blue-white screens rely on vectors where the gene of interest is inserted into the..., you will see two bands: one representing your vector backbone and the other representing the insert....doesn’t contain the insert, you will just see the vector backbone band. Or, you can choose an enzyme that...specific to your insert or by using primers that are vector specific but amplify a potential insert. If you...
  37. Tetracycline Inducible Expression

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    ...pK170.AAV-TRE-Cre-WPRE (Supernova) AAV vector for dox-inducible expression of Cre recombinase. Takuji Iwasato...pRetroX GFP T2A Cre Retroviral vector for dox-inducible expression of GFP T2A Cre recombinase. Floris Foijer...popular empty backbones, expression vectors for transactivators, and vectors for other applications, or...Lentiviral Tet-Off vector for repressible expression with blasticidin selection. *Note: this vector contains an...PB-EF1a-TetOn3G PiggyBac vector expressing Tet-On 3G transactivator constitutively expressed by EF1a promoter ...165457 AAVS1-Neo-TRE-CMV-Cre-rtTA Dox-inducible expression of Cre recombinase. Madeline Lancaster 198752...Tetracycline (Tet) Inducible Expression Tetracycline (Tet) Inducible Expression Tetracycline Off Tetracycline...
  38. Hot Plasmids - March 2020 - base editors, GEVI, MoClo, and optogenetics

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    ... of gene expression and reduces toxicity as compared to previous Cre/lox or drug-induced Cre systems (...combines the Cre/lox system with optogenetics. Cre activity is controlled by red light by splitting Cre and fusing...determined protein expression levels from different promoters, and inhibited gene expression using CRISPRi.... dimerize, bringing each terminus of Cre together to restore Cre activity. As soon as red light or PCB...proteins separate, inactivating Cre. This is critical for reducing Cre toxicity in long-term experiments... Figure 4: The C-terminus of Cre (CreC) and the N-terminus of Cre (CreN) are fused to the truncated.... In this system, cells express various fluorescent proteins controlled by Cre recombination. Each cell...
  39. Genome-wide Screening Using CRISPR

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    ... deliver a pooled population of gRNAs to Cas9 expressing cells. Pooled lentiviral CRISPR libraries (referred...population of gRNA-containing lentiviral transfer vectors, each targeting a specific gene within the genome...gRNAs are then cloned into lentiviral transfer vectors to create the CRISPR library. CRISPR libraries ...) to be used to generate lentivirus (B). Cas9-expressing cells or wild-type cells are treated with lentivirus...
  40. Top Requested Lentivirus and AAV of 2016

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    ...that express cre recombinase. Typically, this feature is used to attain cell-specific expression in transgenic...blast LentiCas9-blast is a Cas9 expression vector developed by Feng Zhang’s lab at the Broad Institute... is a dual-vector system, meaning it is typically used in conjunction with a second vector that delivers...lentiGuide-Puro. The alternative single-vector systems typically express Cas9 and a gRNA from the same plasmid...constructs (i.e., using a dual-vector system as opposed to a single-vector system) has several benefits....stable Cas9-expressing cell line and then transduce this line with lentiviruses expressing various gRNAs...transductions with a single-vector system). Tips for using this plasmid Cas9 expression is typically cytotoxic...
  41. Mouse Modeling, Part 2: Breeding and Crossing Mice

    Type
    Blog Post
    ... that expresses Cre with a strain that expresses a floxed gene of interest. Cre may be expressed globally...heterozygous for each mutated allele.  Cre-lox expressing strains Cre-lox strains are a common example of... in mice expressing both Cre and LoxP occurs. But how are these mice made to begin with? Cre-lox mice ...tissue-specific manner (with expression controlled by a tissue-specific promoter). And, Cre may also be either ...constitutively expressed, or inducible (this is explained more in Part 1 of this series). In any case, Cre is a ...which you’ll want to genotype your mice for expression of Cre, loxP, and your gene of interest. To ensure...site, your control should be littermates that express Cre but not loxP. With this two-part guide to mouse...
  42. Worm Expression Resources

    Type
    Collection
    ... empty backbones, fluorescent proteins, and Cre expression plasmids. Large collections or kits are described...General Tools Fire Lab C. elegans Vector Kit - Andrew Fire Lab. A set of vectors for C. elegans research, including...and spatial control of gene expression in C. elegans by combining expression of the FLP recombinase from...can knock down genes by feeding worms bacteria expressing dsRNA or use CRISPR/Cas9 gene editing to easily...developed and characterized which allow researchers to express desired constructs in precise cell types and/or...ID Plasmid Description Gene/Insert PI Plasmids Expressing Worm Genes/Inserts The table below lists plasmids...plasmids intended for use together (e.g. cloning and expression systems) and therefore supplied as one item. ...
  43. Bacterial Expression Systems

    Type
    Collection
    ... Plasmid Collections Bacterial Expression Systems Bacterial Expression Systems Protein Purification Protein...bacterial expression systems. Read below and browse our curated collection of bacterial expression plasmids...Addgene Blog E. Coli Strains for Protein Expression Protein Expression Epitope Tags Protein Tags Return to ...to top Controlled Expression It isn’t always advantageous to constitutively express your gene of interest...turn on expression only at a specific time. This collection contains plasmids whose expression levels ...Addgene Controlled Expression Resources Check out our Tetracycline (Tet) Inducible Expression Collection for...Find bacterial expression plasmids that can be used for protein purification, protein visualization, ...
  44. Controlling for Off-target Effects with a New Genome-wide CRISPR Screen Design

    Type
    Blog Post
    ... library via a lentiviral vector to cell lines that either stably expressed Cas9 or that had been lentiviral...control for many of the effects of gRNA and Cas9 expression, they fail to account for the effects of Cas9...sites should control for the effects of guide expression and dsDNA breaks. Figure 2: Non-targeting...
  45. Viral Production at Addgene

    Type
    Blog Post
    ... the absence of Cre. mCherry expression alone was detected. pAAV-Ef1a-mCherry-IRES-Cre was a gift from... with viral vector manufacturing facilities, such as the University of Pennsylvania Vector Core. Transfections...Pennsylvania Vector Core. In general, titering is performed by the facility that produced the viral vector lot....Transducibility Some viral vectors are tested in vitro and in vivo for gene expression and/or function. These....1E6 vg/mL, or both. Two days later, Cre-dependent GFP expression was detected with direct fluorescence...Empty vector particles can be identified after negative staining and appear darker than full vector particles...Electron micrograph of AAV vector preparation shows that the vast majority of the vectors consist of full particles...
  46. Another Pathway into Cells: iTOP

    Type
    Blog Post
    ...in which transient protein expression has a long-lasting effect, such as Cre- or Cas9-mediated recombination... mutations and gene expression changes elsewhere in the genome. Second, expression is by nature transient... Primary cells recapitulate the natural biology of a cell type of interest better than immortalized lines...control could enter cultured cells and activate expression of a luciferase reporter. CPP was not required...tested iTOP in a series of primary cell types using Cre and various loxP reporters. In both mouse and human...stem cells transduced with iTOP resulting in GFP expression. Image courtesy of Diego D'Astolfo. CRISPR...potential application of iTOP Having tested iTOP using Cre-lox recombination, D’Astolfo et al. were eager to...
  47. 22 Hot Plasmid Technologies from 2014

    Type
    Blog Post
    ...from Cre-based Brainbow-expressing cells. Autobow plasmids are all-in-one versions which express self-... existing transposon and vector systems and creating an all-synthetic vector that included only the elements... into a destination vector in a predefined order. Finally, the destination vectors are used with Multisite... eight entry vectors can be used for each Multisite Gateway compatible destination vector for a maximum... to Addgene, including lentiviral and AAV expression vectors for certain variants. Klapoetke et al.,... These vectors, termed RUSH (For ROSA26 U6 short hairpin) and CRUSH (Conditional RUSH) use Cre-mediated...dual-color RNAi “sensor” mouse strain in which Cre expression causes the induction of both DsRed fluorescence...
  48. Rabies and Neuronal Tracing

    Type
    Blog Post
    ...example, a researcher can deliver Cre-dependent TVA to Cre-expressing neurons in a transgenic mouse line...RABV expressing the viral protein EnvA on its surface will only infect Cre-positive, TVA-expressing cells...Uses of Cre-lox and Flp-FRT - A Neuroscientist's View Control Gene Expression with FLEx Vectors Resources...Addgene.org AAV Vector for TVA Expression AAV for Rabies Glycoprotein (G) expression  Find Retrograde...to visualize how neurons are connected. Viral Vectors as Neuronal Tracers Due to their ability to efficiently...achieved by using EnvA-pseudotyped RABV, and only expressing the EnvA receptor (TVA) in user-defined cells... genome, so viral progeny will not necessarily express EnvA unless it is supplied in trans. Monosynaptic...
  49. Using AAV for Neuronal Tracing

    Type
    Blog Post
    ... made Cre-dependent. If Cre-dependent vectors are used in transgenic animals that express Cre in only ...of infected cells that also express Cre. Another advantage of AAV vectors is that there are well-established...et al. 2014 traced neurons with an AAV9 vector expressing a Cre-dependent fluorescent marker. Injection...communication. Viral vectors and the nervous system With the advent of viral vector technology, new methods... at Addgene). AAV vectors: A platform for delivering neuronal tracers AAV vectors have been widely used...transgene expression. Fluorescent proteins are widely used for tracing and their expression is often made...a conditional mutant mouse brain that expressed Cre recombinase only in pyramidal cells of the hippocampal...
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