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We narrowed to 111 results for: gfp fluorescence reporter

Showing: 1 - 20 of 111 results

  1. Fluorescent Proteins 101: Green Fluorescent Protein (GFP)

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    Blog Post
    ...Bioluminescence and fluorescence from proteins such as Green Fluorescent Protein (GFP) has likely existed... begin to study GFP and deduce its biochemical properties. Now GFP and its fluorescent derivatives are...backbones for constructing fluorescent fusions. Transcription Reporter: Placing GFP under the control of a...type of transcription reporting was among the earliest uses of GFP. Fluorescence resonance energy transfer...common fluorophores Fluorescent Protein Mutations Relative to Wildtype GFP EGFP F64L; S65T EYFP S65G...halves of EGFP undergo folding, maturation, and fluorescence. Biosensors: A wide array of GFP-based fluorescent...common applications in the lab. Why Green Fluorescent Protein? GFP is a ~27 kDa protein consisting of 238...

  2. Fluorescent Proteins 101: History of Fluorescent Proteins

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    Blog Post
    ...luciferases, as well as fluorescent ones, like Green Fluorescent Protein (GFP). These molecules occur ...laboratory. The discovery of GFP The story of how fluorescent proteins like GFP came to be used as research...their work on GFP. This great honor serves to highlight how useful fluorescent proteins like GFP really are...victoria gene responsible for encoding GFP, and, in 1992, he reported its sequence. Soon after that, in 1994...spectrum that GFP and its derivatives did not previously reach. Nobel Prize for fluorescent proteins The...learning more about fluorescent proteins, I invite you to download our Fluorescent Protein eBook and learn... calcium ions, and the second, which we now call GFP, absorbs that blue light and glows green. In the ...

  3. Four Base Editing Reporters to Monitor and Enrich Editing in Real-time

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    Blog Post
    ...that used an integrated GFP reporter that is converted into BFP (blue fluorescent protein) upon CRISPR/Cas9...not just fluorescent proteins. Figure 4: Reporters in Gene On include a mScarlet reporter, luciferase... their hypothesis with GFP fluorescence. To do this they generated a silent GFP construct, that contains... induction of GFP fluorescence confirming the efficacy of GO as a base-editing reporter. As the initiation...mCherry that restores fluorescence to monitor APOBEC-Cas-9 mediated editing. eGFP reporters for single base ...DSB in their previous reporter, the Harris Lab created a panel of eGFP reporters to quantify the on-target...editing reporters. Image from St. Martin et al., 2019. The Harris lab used these eGFP reporters to analyze...

  4. FlipGFP, a novel fluorescence protease reporter to study apoptosis

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    Blog Post
    ...and fluoresce. FlipCherry: Red fluorescence protease reporter To add to the fluorogenic reporter toolkit...genetically encoded fluorescent executioner caspase reporters. Several apoptosis reporters have been developed...results in a change in fluorescence emission. FRET and fluorescence based reporters however have several...apoptosis reporter, ZipGFP, which utilized the self-assembling split GFP (GFP1-10 and GFP11) to increase...self-assembling split GFP (GFP1-9 and GFP10-11) by flipping a single β-strand of GFP, hence the name FlipGFP. FlipGFP...increases fluorescence 100-fold compared to other reporters (Zhang et al., 2019). How does FlipGFP work? ...transfer (FRET)-based executioner caspase reporters. In these reporters, the FRET pair is linked by a caspase...

  5. Teaching an Old DOG New Tricks: Controlling Protein Activity with GFP

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    Blog Post
    ...GBPs/GFP. The new system, CRE-DOG (Cre Dependent On GFP), is activated by GFP and derivatives GFP and ... of GFP. These systems, known as T-DDOG and Cre-DOG, respectively, repurpose popular GFP reporter lines...to bind GFP. The idea of using GFP as a scaffold suddenly seemed very realistic. Envisioning GFP as a substrate...a UAS-driven luciferase reporter construct. In the absence of GFP, no reporter output was observed in ...electroporated T-DDOGs, GFP, and a reporter construct into the mouse retina. GFP expression robustly activated...T-DDOGs with two mouse GFP reporter lines; again, TdTomato was seen only in cells with GFP, at a high activation...lines expressing GFP in specific cell types to do more than just label cells. If GFP could be co-opted...

  6. Fluorescent CRISPR Reporters: SRIRACCHA and GEmCherry2

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    Blog Post
    ...histone)-GFP reporter into the genome of mammalian cells.  Figure 1: The SRIRACCHA reporter construct...background fluorescence and in-frame fluorescence.  Figure 2: The GEmCherry reporter. Image from... Recently scientists have created CRISPR fluorescent reporter assays to quantify targeted Cas9 cleavage...(NHEJ). In these reporters, editing typically results in a change in the fluorescent readout. In this ...this blog we will focus on two fluorescent CRISPR reporter methods, SRIRACCHA and GEMCherry2. We will cover... CRISPR reporters in the near future.  SRIRACCHA (stable, but reversible, integrated reporter for assaying... the supplied donor plasmid will express GFP. If there’s GFP expression, presumably the endogenous target...

  7. Fluorescent Biosensors for Measuring Autophagic Flux

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    Blog Post
    ...estimated by the GFP/RFP ratio: a decrease in GFP fluorescence relative to RFP fluorescence suggests an increase...Addgene! mRFP-GFP-LC3 tandem fluorescent protein This autophagy biosensor contains mRFP and GFP fused to the...puncta. Find the mRFP-GFP-LC3 plasmid at Addgene! GFP-LC3-RFP-LC3∆G: A fluorescent probe that releases ...biosensor is the GFP-LC3-RFP-LC3ΔG probe. It’s similar to the mRFP-GFP-LC3 Tandem Fluorescent Protein, but... flux, while an increase in GFP fluorescence relative to RFP fluorescence suggests a decrease in autophagic...autophagy. The development of several fluorescent autophagy reporters now allows for the measurement of autophagic... to emission of only red fluorescence. The ratio of red to green fluorescence allows for clear distinction...

  8. Visualizing Translation at the Single Molecule Level

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    Blog Post
    ...occur. For a TRICK reporter mRNA this displacement leads to a change in the fluorescent signal: untranslated...following components: a GFP protein that binds to the coding region of a reporter mRNA via a PP7 coat protein...protein (NLS-PCP-GFP) an RFP protein that binds to the 3’ UTR of the reporter mRNA via an MS2 coat protein...NLS-MS2-RFP) the reporter mRNA, which contains the tethering sites for the fluorescent proteins and is ...64543) Before translation, both GFP and RFP are bound to the reporter, causing it to appear yellow. The...translation pushes NLS-PCP-GFP off of the mRNA, leaving only a red FP bound to the reporter. Because it contains...translation is necessary for removal of GFP from the TRICK reporter. Delayed translation is known to be important...

  9. RANbodies: Reporter Nanobody Fusions

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    Blog Post
    ...Amplifying weak signals of fluorescent protein (i.e. GFP, RFP) Detecting GFP reconstitution across synaptic...tagged and instead are conjugated to reporters (i.e. fluorescent dyes, HRP, etc. ) after purification....detectable by two different tags: a reporter and an HA tag. The reporter comes in three varieties: HRP, Spaghetti...independent of the reporter. The only caveat is that HA staining is weaker than reporter staining. Picking...Picking the right reporter for your RANBody While all three reporters stain cultured cells and tissue sections... have 10 HA or 10 MYC tags built into a GFP scaffold. Some GFP nanobodies  stain poorly when tagged with...Monster, and Chicken IgY Domain RANbody Reporters. Reporter Detection Method Uses Pros Cons Antigens...

  10. Hot Plasmids - June 2020 - Barcoded CRISPR Library, Sparse Cell Labeling, Calcineurin Reporter, and DNA Staining Dye Alternative

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    Blog Post
    ...https://doi.org/10.1101/788679 A destabilized GFP reporter for calcineurin activity in yeast Article contributed...calcineurin transcriptional reporter consisting of a quickly-degraded destabilized GFP variant fused to a 4X...bottom panels) equipped with destabilized GFP calcineurin reporter (blue) and stained with PI (pink) to indicate... Image from Diessl et al., 2020. Find the GFP reporter calcineurin activity here Diessl et al., Microbial...stranded DNA bound by tTALE-FP with the fluorescent protein fluorescing green. Image from Shin et al., 2019...intercalating fluorescent dyes for DNA-protein interaction studies? Kyubong Jo's lab generated fluorescent protein...attached fluorescent protein to the DNA. They created plasmids for purification of tTALE-eGFP and tTALE-mCherry...

  11. Fluorescent Proteins 101: When GFP lets you down

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    Blog Post
    ...fusion with GFP allows for detection of genomic locations (Chen et al., 2013). GFP fluorescence overlaps...Introduction to GFP Read our Fluorescent Proteins Blog Posts Download the Fluorescent Proteins 101 eBook...S65T) in the original jellyfish GFP (AvGFP) to create enhanced GFP (EGFP), a variant with improved brightness... There are numerous GFP variants. Here I use the name ‘GFP’, which refers to mEGFP. This variant was made...consequence GFP remains non-fluorescent under anaerobic conditions. This holds true for any of the AvGFP and ...of Amsterdam). GFP is the most popular, most widely used genetically encoded fluorescent probe. Several...popularity of GFP including (i) fast and complete maturation to functional, fluorescent protein in almost...

  12. When is a Monomer not a Monomer? The Top Three Ways Your Favorite Fluorescent Protein Oligomerizes in Cells

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    Blog Post
    ...you're using green fluorescent protein or Enhanced Green Fluorescent Protein (GFP/EGFP) for a transcriptional...dimerize. That means that your POI fused to GFP or another fluorescent protein (FP) could be forming dimers ...remain unaware that EGFP/GFP is prone to forming noncovalent dimers. This property of EGFP can lead to significant...contributed by guest blogger Erik L. Snapp. Stop using EGFP/GFP for fusion proteins! Despite multiple studies ...in the world, is not inert. In all seriousness, EGFP/GFP has a real nontrivial propensity to noncovalently...best solution is to use truly monomeric FPs. EGFP and other GFP family members (superfolder, Emerald, CFP...designated mEGFP, mVenus, etc. A word of caution is needed because FPs not derived from GFP, i.e. the ...

  13. Sensing Neuronal Dopamine

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    Blog Post
    ...similar strategy: a GFP variant bound to a DA receptor, such that the GFP fluoresces upon DA-receptor binding...sensor is a single fluorescent protein-based sensor. This sensor was engineered from a GFP variant and a DA... DA receptor such that GFP fluoresces when the receptor is bound by DA. Two variants of the sensor, dLight1.1...this, researchers from some labs have developed fluorescent-protein based DA sensors (Figure 2). The dLight1...affinity and high-magnitude responses (increases in fluorescence) at low concentrations (e.g., 100 nm) of DA....behaving mice to gather the following types of data: Report time-course and concentration of released DA in...optogenetically activated and inhibited neurons in live mice Report modulation of DA signaling during learning and ...

  14. SunTag and Fluorescent Imaging

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    Blog Post
    ...turn up the brightness in your fluorescent imaging experiments. Fluorescent protein fusions One of the easiest...-molecule reporter of intracellular processes. Initially, Tanenbaum et al. observed some GFP aggregation...scaffold fully occupied with GFP has a molecular weight of 1,400 kDa vs 24 kDa for GFP alone. Although traditional...Blog Sign Up to Receive the Fluorescent Protein eBook Avoid Fluorescent Protein Oligomerization Learn...Resources on Addgene.org Find Fluorescent Protein Empy Backbones Visit Our Fluorescent Protein Guide Page Find...aggregation, which they reduced by using superfolder GFP (sfGFP) with the small solubility tag GB1. In SunTag...nomenclature throughout the rest of this blog post, GFP refers to sfGFP-GB1.   Tanenbaum et al. examined the power...

  15. Seeing Red: Simple GFP Photoconversion

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    Blog Post
    ...process worked well with the common GFP variants EGFP, mGFP4-T, and S65T GFP, and no red color was observed...you’ve used a GFP derivative to conduct subcellular localization studies or make a reporter construct. Fluorescent...exciting GFP-labeled plant cells at 405 nm instead of 488 nm, Sattarzadeh et al. noticed that GFP had turned...cytosol-targeted GFP. White circles represent the irradiated area. Photoconverted GFP spreads through ...Applications and limitations of GFP photoconversion One concern with photoconverting GFP is the expression level...intensity increases with GFP concentration and saturates around 30 uM. For low-abundance GFP fusions, a photoconversion...repurpose GFP is great news for microscopy enthusiasts! Addgene has empty backbones containing GFP variants...

  16. Split Fluorescent Proteins for Studying Protein-Protein Interactions

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    Blog Post
    ...Chang-Deng Hu Green sfGFP Split super-folder GFP, our most-requested GFP(1–10) and GFP(11) Versatile protein...assemble the full structure of the fluorescent protein, producing fluorescent signal. Image modified from Feng...) for use with GFP(11) Multiplexed labeling of cellular proteins with split fluorescent protein tags. ...Identification of new fluorescent protein fragments for bimolecular fluorescence complementation analysis...superpositive GFP Split-superpositive GFP reassembly is a fast, efficient, and robust method for detecting protein-protein...

  17. 28 Hot Plasmid Technologies from 2015

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    Blog Post
    ...customized fluorescent reporters can be challenging enough, but incorporating multiple reporters into a single... issues with fluorescent pH sensors, a set of luciferase-fluorophore pH fusion reporters, pRSETb-pHlash... three components: a GFP protein that binds to the coding region of a reporter mRNA via a PP7 coat protein...protein (NLS-PCP-GFP) a RFP protein that binds to the 3’ UTR of the reporter mRNA via an MS2 coat protein...NLS-MS2-RFP) the reporter mRNA, which contains the tethering sites for the fluorescent proteins and an ...64543or 64542) When the reporter mRNA is first transcribed, it is bound by both the GFP and the RFP proteins...their reporter mRNAs. Using the TRICK plasmids, Halstead et al demonstrated that 91% of reporter mRNAs...

  18. Rosella: A Fluorescent pH-Biosensor for Studying Autophagy

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    Blog Post
    ...tandem fluorescent proteins: a relatively pH-insensitive RFP variant, DsRed.T3 and a pH-sensitive GFP variant... is the permanent fluorescent tag portion of Rosella: it will emit red fluorescence regardless of its ...the fluorescent properties of Rosella.   Table 2: Effect of Localization on Rosella’s fluorescence emission...green fluorescence accumulates in the vacuole. See Figure 2 for an example of what fluorescence looks ...Devenish, R. J. (2008). Rosella: A fluorescent pH-biosensor for reporting vacuolar turnover of cytosol and...mammalian cells using a single fluorescent biosensor. Scientific Reports,5(1). doi:10.1038/srep12397. PubMed...Addgene Blog Beware of Fluorescent Protein Oligomerization Seeing Red: Simple GFP Photoconversion Light...

  19. Fluorescent Proteins 101: Fluorescent Biosensors

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    Blog Post
    ...and fluorescent reporters being especially popular. We’ll give you an introduction to fluorescent biosensors... of fluorescently-labeled components Fluorescence-activated cell sorting (for cells); fluorescent HPLC...detects. This change then generates a reporter signal. Reporter signals may be electrochemical or light-based...Picking your reporter Don’t forget about the other end of the biosensor: which fluorescent protein is most...calcium and zinc. Some biosensors contain a single fluorescent protein fused to a domain that senses the concentration...biosensors as an example. Many calcium biosensors include GFP fused to calmodulin (CaM) and the chicken myosin ...When calcium is absent, the construct does not fluoresce; when present, calcium induces CaM/RS20 interaction...

  20. 22 Hot Plasmid Technologies from 2014

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    Blog Post
    ...dim GFPs The availability of the three dimensional structure of GFP, its brighter mutant S65T-GFP, and...induction of both DsRed fluorescence and GFP shRNA. Mice carrying the R26DsRedR; CRUSH-GFP; and Nestin-Cre alleles...scientists to engineer a wide variety of GFPs with diversity in fluorescence brightness, intensity, excitation...gene editing. Dr. Masahito Ikawa has created a GFP reporter plasmid for scientists to validate the efficacy...functional complementation between two non-fluorescent split GFP fragments. When the two fragments, expressed...proximity in the synaptic cleft, functional fluorescent GFP is reconstituted in vivo. Currently available...identified a family of GFP proteins in the cephalochordate Branchiostoma floridae, named bfloGFPs. They went on...
Showing: 1 - 20 of 111 results