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TypeBlog Post...It should be no surprise then that a lot of our subject matter comes straight from you, whether you realize...second review from someone less familiar with the subject for clarity. Our content covers a lot of very ...
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AAV Q&A with Tim Miles
TypeBlog Post...CLOVER Center at CalTech? If so, you may have submitted a question that didn’t get answered live - but...Find Adenovirus Plasmids Adenovirus Guide Page Subscribe to Viral Vectors Blog Posts ... -
Antibodies 101: Buffers, Storage, and Conjugates
TypeBlog Post...freeze-thaw-freeze cycle before, or otherwise been subject to mishandling? Is the experiment you’re planning...the same assay. This is one of the most complex subjects in antibody-based protocols - but thankfully this... -
CasPEDIA: A Functional Classification of Cas Enzymes
TypeBlog Post...documents the target substrate (DNA/RNA and strandedness) along with its action on the substrate (nick, bind, ... -
Flow Cytometry Readouts: Yes, No, and Everything in Between
TypeBlog Post...MFI makes it easier to identify and study these subtle shifts. Additionally, you can gate off the histograms...the presence/absence of your marker but there are subtle shifts in expression, using a histogram plot and... -
Viral Vectors 101: Gamma-Retroviral Packaging Systems
TypeBlog Post...transgenes via increased nuclear export. LTR Subcomponents: -U3 -R -U5 LTR; Long terminal repeats; U3...bigger than ∼3 kb are packaged less efficiently. Subcomponents: U3; Unique 3'; region at the 3' end of viral... -
The Many Reasons for Irreproducible Research- and a Vaccine to Eradicate It
TypeBlog Post...results of all four of those tests and not just the subset of those that return a particular result. Anything...review occurs before results are known. The author submits the research plan (similar to a preregistration... -
Plasmids 101: Blue-white Screening
TypeBlog Post...β-galactosidase enzyme can break down a dye-linked substrate called x-gal (5-bromo-4-chloro-3-indolyl-β-D-galacto-pyranoside... genes that allow for the use of a particular substrate in defined medium, without which the cells cannot... -
CRISPR 101: Non-Homologous End Joining
TypeBlog Post...for recruitment of a kinase (DNA-PKcs) and a two subunit DNA ligase (XRCC4-ligase IV); together with some...Aprataxin, Tdp2) that function to make ends better substrates for ligation. Although we do not describe these... -
Hot Plasmids - March 2019 - Anti-CRISPR, 2in1 Cloning, Fluorescent Voltage Indicators, and Photoswitchable Proteins
TypeBlog Post...Every few months we highlight a subset of the new plasmids in the repository through our hot plasmids...photo-reversible protein-protein interactions can control subcellular localization processes in vivo. They deposited... -
RaPID Detection of RNA-protein Interactions
TypeBlog Post...BASU, is derived from a BirA* homolog found in B. subtilis. BASU was compared head-to-head with the E. coli...experiments. These background proteins were then subtracted from Ramanathan et al.’s RaPID datasets. Applications... -
Hot Plasmids April 2018 - Protein Degradation, Nanoscopy, FIRE-Cas9, and Yeast Expression Tools
TypeBlog Post...Every few months we highlight a subset of the new plasmids in the repository through our hot plasmids...analysis of the kinetics of chromatin regulation and subsequent mathematical modeling. Its reversibility allows... -
Hot Plasmids - March 2020 - base editors, GEVI, MoClo, and optogenetics
TypeBlog Post...Every few months we highlight a subset of the new plasmids in the repository through our hot plasmids...Assembly of plasmids using the Cyanogate Kit and subsequent transformation into cyanobacteria. Image from... -
Giving gRNAs a Facelift - Synthetic and Beyond
TypeBlog Post...at the same site, is 2’-fluoro (2’-F), which substitutes a fluorine for the hydroxyl group at the 2’ position...advantages, bridged nucleic acids with N-methyl substitutions are slightly more efficient and less toxic to... -
Antibodies 101: Secondary Antibodies
TypeBlog Post...secondary antibodies generated against isotype subclasses, such as mouse IgG2 or IgG4. This can be important...secondary antibodies which recognize specific isotype subclasses of primary antibodies can increase the possible... -
Choosing the B(right)est Fluorescent Protein: Aggregation Tendency
TypeBlog Post...caution, since the difference between studies is substantial (e.g, the poor performance of mRuby2 is detected...Backbones with Fluorescent Tags Find Plasmids for Subcellular Localization Browse the entire Fluorescent Protein... -
Viral Vectors 101: An Introduction to AAV
TypeBlog Post...helpful when wanting to target specific neuron subtypes, since AAVs tend to be very neuro-permissive (...AAV8 vectors with broadly active promoters from subretinal injections of neonatal mouse eyes at two different... -
Writing Scientific Manuscripts: Literature Searching, Reading, & Organizing
TypeBlog Post...other references to scientific literature to substantiate the facts upon which it builds. This means you...need to be on a network with an institutional subscription), archived on PubMed Central, or in preprint... -
BeHeard Award 2018: Diseases of Glycosylation, Arginine Mutagenesis, & Neural Development
TypeBlog Post... which proteins assemble into functional multi-subunit macromolecular complexes, but a serendipitous discovery...sites in T4 lysozyme by deficiency-creating substitutions." Journal of molecular biology 277.2 (1998):... -
Hot Plasmids - October 2020
TypeBlog Post...Every few months we highlight a subset of the new plasmids and viral preps in the repository through ...-wrmScarlet labeling proteins with different subcellular locations. Image from Goudeau et al., 2020. ...