We narrowed to 610 results for: sam
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TypeBlog Post...seven required genes and the CRISPR RNA under the same promoter, and a donor plasmid (pDonor) encodes the...immunity, whereby multiple proximal insertions with the same transposon exhibit reduced efficiencies (Vo et al...
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CRISPR Between the Genes: How to Experiment with Enhancers and Epigenomics
TypeBlog Post...lentiviral vector, an attenuated retrovirus in the same family as HIV. By design, our lentivirii are genetically...very-sensitive-local -L 9 -N 1 -U GRNA_23MERS -S GRNA_HITS.sam Many thanks to our guest blogger, Aneesh Karve... -
Tips for Screening with Yeast Two Hybrid Systems
TypeBlog Post...libraries of bait and prey against each other at the same time in order to try and access the entire interactome...the protein partner or the UAS/reporter gene, the same bait and prey libraries can be screened using both... -
Your Lentiviral Plasmid FAQs Answered
TypeBlog Post...often: Q1: Are retroviruses and lentiviruses the same thing? Can I package lentivirus with retroviral ...both lentiviruses and gamma-retroviruses use the same genes for packaging (that's gag, pol, and env), ... -
"Hall of Fame" AAV Enhancers from the Allen Institute for Brain Science
TypeBlog Post...transcription (Figure 1). Although all cell types share the same DNA sequence, not all enhancers are functional in...enhancer in one cell type but not in others. The same mechanism that allows enhancers to regulate gene... -
Plasmids 101: Shuttle Vectors
TypeBlog Post...different from other plasmids? If we all use the same molecular code, can I transfect any old bacterial...it’s pretty incredible that my cells “speak” the same molecular language as the tree outside my window... -
Plasmids 101: Stringent Regulation of Replication
TypeBlog Post...machinery in order to replicate—but not always to the same extent. As described in our previous Origin of Replication...proteins, it can be regulated indirectly via the same mechanisms that affect DnaA and IHF. RepA also controls... -
Hot Plasmids Spring 2024
TypeBlog Post...#211756 (left panel) or #211757 (middle panel). Samples were also immunoblotted against vinculin as a loading...during action potentials of fast-spiking neurons. The same A-to-D mutation in the related voltage indicator... -
Viral Vectors 101: Preparing Pooled Libraries
TypeBlog Post...plasmids, all of which need to be represented in the same proportion after amplification as they were prior...visualization) that confirm diversity of the library sample, and any other information or scripts provided ... -
Plasmids 101: Gateway Cloning
TypeBlog Post...possible to set up the BP and LR reactions in the same tube, speeding up the cloning of the attB-PCR products...multiple DNA fragments into many vectors at once in the same tube. You can clone up to 4 DNA fragments, in a ... -
Career Insights: Technical Support Specialist
TypeBlog Post...Support is essential for success. For possibly this same reason, it can be one of the more constant and safe...many different backgrounds and realizing that the same approach does not work for everyone. The benefit... -
New Tools Enable CRISPRa for Neuroscience Applications
TypeBlog Post... Gene isoforms refer to mRNAs generated from the same gene but with different untranslated or coding regions...transcriptional start sites, all of which yield the same BDNF protein. To demonstrate the specificity that... -
Controlling for Off-target Effects with a New Genome-wide CRISPR Screen Design
TypeBlog Post...non-targeting guides, when both are analyzed using the same false-discovery rate cutoff. Adding safe-targeting...genome-wide CRISPR screens are prone to some of the same flaws as RNAi screens, such as non-specific toxicity... -
Neuronal labeling with Spaghetti Monster
TypeBlog Post...super-resolution STORM imaging, and electron microscopy. Sample preparation for these techniques sometimes makes...smFPs retain their ability to be detected after sample preparation better than standard proteins tags ... -
To Codon Optimize or Not: That is the Question
TypeBlog Post...amino acids and three stop codons, meaning that the same amino acid can be encoded by more than one codon...organisms. There are several codons that encode the same amino acid. Each organism, however, may preferentially... -
The Challenges of Cell Culture
TypeBlog Post...materials available from commercial repositories and the same cell line from a colleague?”. The main difference...) profiling can be used to ID the cell line. The same test is so good that it is used as a forensic technique... -
Getting the Most from Your Lentiviral Transduction
TypeBlog Post.... Know your target cells Labs tend to follow the same general procedure for lentiviral infections, produce...but also between different lots of serum from the same source. Labs that routinely produce lentivirus may... -
Tips for Using FRET in Your Experiments
TypeBlog Post...What is FRET? In their JCB 2003 paper, Sekar and Periasamy defined FRET as "a distance-dependent physical...341-50. doi: 10.1002/bies.201100098. Sekar RB, Periasamy A. Fluorescence resonance energy transfer (FRET... -
CRISPR 101: Validating Your Genome Edit
TypeBlog Post... as a proxy for your edit of interest. Using the same gRNA and donor, you can deliver a silent mutation...to compare the sequencing reads from your edited sample to an untreated population. Software such as CRISPResso... -
Four Ways to Package Transgenes That Exceed the Size Limit of Adeno-associated Virus
TypeBlog Post...nbt0702-697 Hirsch ML, Agbandje-McKenna M, Jude Samulski R (2010) Little Vector, Big Gene Transduction:...Bellon I, Yin C, Chavala S, Pryadkina M, Richard I, Samulski RJ (2013) Oversized AAV Transductifon Is Mediated...