We narrowed to 207 results for: Kars;
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TypeBlog Post... S, Joung J, Slaymaker IM, Cox DBT, Shmakov S, Makarova KS, Semenova E, Minakhin L, Severinov K, Regev...10.1261/rna.054098.115 Shmakov S, Abudayyeh OO, Makarova KS, Wolf YI, Gootenberg JS, Semenova E, Minakhin... B, Gootenberg JS, Abudayyeh OO, Slaymaker IM, Makarova KS, Essletzbichler P, Volz SE, Joung J, van der...
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To Codon Optimize or Not: That is the Question
TypeBlog Post...codon optimize genes from eukaryotic organisms for expression in prokaryotic systems or yeast (Lanza et...base-pairing mechanism for translation initiation in eukaryotes. Nat Struct Mol Biol 13:30–34 . https://doi.org... -
Plasmids 101: Repressible Promoters
TypeBlog Post... 2843425.Takara Bio. Tet-On and Tet-Off systems: Second generation. https://www.takarabio.com/products... the system have been engineered and improved. Takara’s “2nd generation Tet-Off vectors (Tet-Advanced)... -
Penn Vector Core Partnership with Addgene
TypeCollection...Optogenetics Karl Deisseroth AV-1-26966P 26966-AAV1 pAAV-Ef1a-DIO eNpHR 3.0-EYFP Optogenetics Karl Deisseroth...Optogenetics Karl Deisseroth AV-1-26968P 26968-AAV1 pAAV-Ef1a-DIO ChETA-EYFP Optogenetics Karl Deisseroth...Optogenetics Karl Deisseroth AV-1-26971P 26971-AAV1 pAAV-CaMKIIa-eNpHR 3.0-EYFP Optogenetics Karl Deisseroth...Optogenetics Karl Deisseroth AV-1-26975 26975-AAV1 pAAV-CaMKIIa-hChR2(H134R)-mCherry Optogenetics Karl Deisseroth...Optogenetics Karl Deisseroth AV-5-26966P 26966-AAV5 pAAV-Ef1a-DIO eNpHR 3.0-EYFP Optogenetics Karl Deisseroth...Optogenetics Karl Deisseroth AV-5-26969P 26969-AAV5 pAAV-CaMKIIa-hChR2(H134R)-EYFP Optogenetics Karl Deisseroth...Optogenetics Karl Deisseroth AV-5-26973P 26973-AAV5 pAAV-hSyn-hChR2(H134R)-EYFP Optogenetics Karl Deisseroth... -
Prime Editing: Adding Precision and Flexibility to CRISPR Editing
TypeBlog Post...found that La, which is ubiquitously expressed in eukaryotes, binds and stabilizes the 3′ tail of pegRNAs .... J., Hussmann, J. A., Yan, J., Knipping, F., Ravisankar, P., Chen, P.-F., Chen, C., Nelson, J. W., Newby...s41551-024-01227-1 Yan, J., Oyler-Castrillo, P., Ravisankar, P., Ward, C. C., Levesque, S., Jing, Y., Simpson... -
Plasmid Preps: Different Purity, Different Quantities, Different Uses
TypeBlog Post...are used to insert recombinant DNA from prokaryotes or eukaryotes into a synthetic vector that can have ... -
CASTing Off for New Shores in Human Genome Editing
TypeBlog Post...useful. But they were barely effective at editing eukaryotic cells — at least, until they met the directed...doi.org/10.1038/s41586-019-1323-z Peters, J. E., Makarova, K. S., Shmakov, S., & Koonin, E. V. (2017). Recruitment... -
New Viral Vectors - Winter 2025
TypeBlog Post... pAAV-Ef1a-fDIO EYFP AAV5. AAV8, AAVrg Control Karl Deisseroth New serotype (multiple) rAAV-CAG...pAAV-CaMKIIa-ChRmine-oScarlet-KV 2.1-WPRE AAV8 Optogenetics Karl Deisseroth New viral prep pAAV-CaMKIIa(0.4)-eOPN3... -
CRISPR History and Development for Genome Engineering
TypeCollection...An overview of CRISPR's development from a prokaryotic immune system to a valuable genome engineering...revolution shows no signs of slowing down. This prokaryotic immune system is especially amenable to genome...offering flexibility and easy multiplexing/scaling. Prokaryotes have long utilized CRISPR as a powerful defensive...elucidated until 2007. Scientists hypothesized that prokaryotes used CRISPR as part of an adaptive immune system...PAM sequences and number/types of Cas proteins. Makarova et al. ’s classification defines 5 types and 16...system seems like a winning strategy to ensure prokaryotic survival, but it is not invincible. Bondy-Denomy...provides acquired resistance against viruses in prokaryotes. Science . 315(5819):1709-12. PMID: 17379808 ... -
A Practical Approach to Choosing the B(right)est Fluorescent Protein
TypeBlog Post... the biological system (temperature, prokaryote versus eukaryote, background fluorescence). Determining... -
Why and how to start studying chromatin (with Addgene's help)
TypeBlog Post...architecture to every diagram portraying some aspect of eukaryotic DNA would become busy and potentially detract...me at the Keystone Chromatin meeting, especially Karen Reddy (@theReddyLab), Thoru Pederson, Joanna Wysocka... -
CasPEDIA: A Functional Classification of Cas Enzymes
TypeBlog Post...and discover orthologs with similar properties (Makarova et al). CasPEDIA is an evolving database, and...Structural Biology. https://doi.org/10.32942/X2C31F Makarova, K. S., Wolf, Y. I., Iranzo, J., et al. (2019)... -
Plasmids 101: Yeast Vectors
TypeBlog Post...Why do scientists use yeast vectors? Yeast are eukaryotes and thus contain complex internal cell structures...technical advantages that come with working with prokaryotes. This includes but is not limited to: rapid growth... -
Split Fluorescent Proteins for Studying Protein-Protein Interactions
TypeBlog Post...oxygenase for chromophore formation (abundant in eukaryotes) A Near-Infrared BiFC Reporter for In Vivo Imaging...oxygenase for chromophore formation (abundant in eukaryotes) Bright monomeric near-infrared fluorescent proteins... -
Design Tips for Prime Editing
TypeBlog Post.... J., Hussmann, J. A., Yan, J., Knipping, F., Ravisankar, P., Chen, P.-F., Chen, C., Nelson, J. W., Newby...j.cell.2014.02.001 Yan, J., Oyler-Castrillo, P., Ravisankar, P., Ward, C. C., Levesque, S., Jing, Y., Simpson... -
CRISPR Activators: A Comparison Between dCas9-VP64, SAM, SunTag, VPR, and More!
TypeBlog Post...to as CRISPRa, was initially published in 2013 (Bikard et al., 2013, Perez-Pinera et al., 2013). In the...experiment. Good luck with your experiment! References Bikard D, Jiang W, Samai P, Hochschild A, Zhang F, Marraffini... -
Cpf1 Update: Comparison to Cas9 and NgAgo
TypeBlog Post... B, Gootenberg JS, Abudayyeh OO, Slaymaker IM, Makarova KS, Essletzbichler P, Volz SE, Joung J, van der...plasmids from this publication at Addgene. 4. Makarova KS, Wolf YI, Alkhnbashi OS, Costa F, Shah SA, ... -
Reaching out to China: Canton Nucleic Acids Forum (CNAF) 2015
TypeBlog Post... system as it relates to its natural role in prokaryotic immunity to viral invasion. His lab is studying...distinct aspects of the CRISPR regions of the prokaryotic genome. Then he desribed how P. furiosus has ... -
Neurodegeneration Plasmid Collection
TypeCollection...OPTN His T7 ALS Jon Ashwell 23376 pDONR223-PRKAR1B PRKAR1B Dementia and/or parkinsonism William Hahn 23452...Parkinson's, FTD Karen Ashe 46905 pRK5-EGFP-Tau AP MAPT GFP CMV Parkinson's, FTD Karen Ashe 46906 pRK5-...Parkinson's, FTD Karen Ashe 46907 pRK5-EGFP-Tau E14 MAPT GFP CMV Parkinson's, FTD Karen Ashe 46908 pRK5...Parkinson's, FTD Karen Ashe 46909 pRK5-EGFP-Tau E14 P301L MAPT GFP CMV Parkinson's, FTD Karen Ashe 46924 YFP-Parkin...-Spatz disease David Root 76838 PRKAR1B gRNA (BRDN0001146606) PRKAR1B hU6 Dementia and/or parkinsonism...parkinsonism David Root 76839 PRKAR1B gRNA (BRDN0001144765) PRKAR1B hU6 Dementia and/or parkinsonism David Root ...Root 76840 PRKAR1B gRNA (BRDN0001147089) PRKAR1B hU6 Dementia and/or parkinsonism David Root 76898 PRKCG ... -
AAV Vector Quality Control: Going the Extra Mile with NGS
TypeBlog Post...Salvetti A (2005) Evidence for Encapsidation of Prokaryotic Sequences during Recombinant Adeno-Associated... Karen Guerin...