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  1. Plasmids 101: Cre-lox

    Type
    Blog Post
    ... transcriptional and translational termination features with loxP sites on either side (often called a...
  2. Plasmids 101: Protein tags

    Type
    Blog Post
    ...multiple rounds of purification to get your protein as pure as possible? Vectors that offer different combinations...
  3. Protocol - How to Inoculate a Bacterial Culture

    Type
    Protocol
    ...liquid culture. More aeration may help to increase the density of the culture. Normally cultures shake ... to room temperature. Now screw on the top of the bottle and store the LB at room temperature. When ready...the culture with sterile aluminum foil or a cap that is not air tight. Incubate bacterial culture at 37...protocol and conduct an OD600 to measure the density of your culture if needed. A good negative control...went wrong? Try growing the culture for more time. Some bacterial cultures grow more slowly. Also, bacteria...Inoculating a Bacterial Culture Protocols... Protocols Inoculating a Liquid Bacterial Culture Inoculating a Liquid Bacterial...
  4. Pouring LB Agar Plates

    Type
    Protocol
    ...break down at this temperature. Check with your antibiotic’s manufacturer to make sure this is true in your...grow). However, it is also more expensive. Procedure Measure 37g of pre-mixed LB-agar powder per L of molten... min. The high pressure will prevent your gel mix from boiling over at high temperature. Pro-Tip Although...harsh conditions in the autoclave. Be sure to check the literature for an appropriate sterilization technique...60 ℃ is a good temperature because the molten agar will remain liquid at this temperature but most antibiotics...bottle. Pro-Tips Be sure to swirl your plates after pouring to remove bubbles and ensure an even distrubtion...plates to solidify at room temperature, however we leave them out at room temperature overnight to allow them...
  5. Handling Plasmids from Addgene - Purifying Plasmid DNA

    Type
    Protocol
    ...Plasmid DNA from Bacterial Culture Recovering Plasmid DNA from Bacterial Culture You may also like... Bacterial...will discuss the general procedure for purifying plasmid DNA from bacterial culture. For details on how to...describe the general procedure for purifying plasmid DNA from bacterial cultures. If you will be using...(low copy plasmids require larger cultures). Centrifuge the culture to pellet the bacteria before proceeding...How to purify plasmid DNA from a bacterial culture, including protocols, tips, and FAQ Protocols...Isolating Bacteria Inoculating a Liquid Bacterial Culture Introduction Many molecular biology techniques ...individual colonies and to generate liquid bacterial cultures , please see those pages. Several companies, such...
  6. Isolating a Monoclonal Cell Population by Limiting Dilution

    Type
    Protocol
    ...individual cultures. Other methods for enhancing single cell growth, such as using culture medium with...different cell types. Before starting this procedure, be sure that the cell pool has been sufficiently ...trypsinize the cells and expand them to larger culture dishes, being sure not to cross contaminate the independent...highest or lowest transgene expression ( Figure 2 ). Sample Data Figure 1: Generation of monoclonal cell lines...of proviral integration across cells. Selective pressure on this heterogeneous cell pool could lead to ...TrypLE, Thermo Fisher 12605-010) 6-well tissue culture treated dish, Corning 3516 96-well plate, Corning... µm cell strainer mesh (optional) 10 cm tissue culture dish, Corning 430167 (optional) Reagent Preparation...
  7. Water Bath Protocol

    Type
    Protocol
    ...walk-in refrigerators to achieve a temperature between 4°C and room temperature. This general protocol suits...bath weights and floats Reagents None needed Procedure Ensure that the water bath and water bath cover are...spot to secure the thermometer in place. Turn the water bath on and set the appropriate temperature as described...the correct temperature. Set up your water bath so that it will reach the desired temperature by the time...that helps bring your materials to a particular temperature, catalyze chemical reactions such as restriction...amount of water needed to fill the water bath, and be sure to know what the maximum fill capacity is. Look ...described in your protocol. How to set the temperature will vary depending on the model of water bath,...
  8. AAV ddPCR Titration

    Type
    Protocol
    ...Grade Water Procedure Preparation Before handling any viruses, get materials ready. Ensure that primers...the cartridge with the DG8 gasket, making sure that it is secure. Transfer the cartridge holder to the droplet...is not at temperature, touch the screen on the plate sealer to allow it to get to temperature. Once the...of the titer, take the average of several measurements. Figure 1: ddPCR sample data Sample Dilution Concentration... BSL-2 handling depending on the insert. Please ensure that you are in compliance with your institution...place in the Biological Safety Cabinet (BSC). Make sure that the BSC to be used for dilution and the BSC... droplet generation (droplet generation BSC) to ensure no contamination of the PCR reagents and the NTC...
  9. AAV Purification by Iodixanol Gradient Ultracentrifugation

    Type
    Protocol
    ...carefully puncture the QuickSeal tube at the interface of the 60% and 40% gradient (see Figure 2) with ...using Iodixanol gradient ultracentrifugation to get pure adeno-associated virus (AAV) preps for use in your...of steps that separate out contaminants from an impure AAV preparation. The 15% iodixanol step has 1M ...of Buffer B and 2 mL of 5 M NaCl to 43 mL PBS Procedure Preparation and loading of the iodixanol gradient... Hamilton needle, taking care to avoid bubbles (Figure 1). 8 mL of 15% iodixanol step 5 mL of 25% iodixanol...the rotor and place them in a stable rack. **Make sure not to disturb the gradient!** Collect Fractions...the needle’s opening to collect the fractions. Puncture the top of the QuickSeal tube with a 16 ga needle...
  10. Protocol - pLKO.1 – TRC Cloning Vector

    Type
    Protocol
    .... Addgene makes every effort to ensure the accuracy of its literature, but realizes that typographical... any kind regarding the contents of any literature. Literature are provided to you as a guide and on an... pLKO.1 allows for convenient stable selection. Figure 1 : Map of pLKO.1 containing an shRNA insert. The...70°C for 10 minutes then slowly cool to room temperature over the period of several hours. If using a ...the flame, and allow the water to cool to room temperature. This will take a few hours, but it is important...alternative options, please refer to the enzyme manufacturer's resources, such as NEB’s online tool NEBcloner...gel extraction kit. Elute in 30 μL of ddH 2 O. Measure the DNA concentration. C.4 Ligating and Transforming...
  11. CRISPR Library Amplification

    Type
    Protocol
    ...recovery of cells. Ensure access to autoclaved, sterile reagents for all steps. Procedure Day 1 Add 200 ng...Pooled libraries can be challenging and expensive to ensure adequate quality, but this upfront cost will save...Transformation should be performed at the end of the day to ensure that growth times are limited. Day 2: Harvest cells...should be harvested first thing in the morning to ensure that outgrowth and competition are limited. Equipment...The use of electrocompetent cells is essential to ensure high efficiency uptake of plasmid library DNA. ...Repeat for each of the 25 µl aliquots of cell/DNA mixture used (8 in the described protocol) using a new ... plates upside down at 30 ℃ overnight. Critical Ensure at this stage that no unabsorbed media drips onto...
  12. Using a Light Microscope Protocol

    Type
    Protocol
    ... you can see the edges of the aperture are in focus. Center the aperture in your field of view and then...drawing skills. Regardless of your image capture method, be sure to record the magnification used, any stains...images in the future. Conclusion Like any important laboratory instrument, you should be sure to take care...a drop of pond water or the cells in your cell culture dish. Microscopes come in a huge range of shapes...ability to distinguish between two discrete objects). Figure 1 depicts an image of a compound light microscope...microscope with the main components labeled: Figure 1: Diagram of a compound light microscope with labels. Created... You can increase contrast by a) adjusting the aperture of the condenser diaphragm to limit the amount...
Showing: 961 - 980 of 1020 results