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We narrowed to 532 results for: abo.3

Showing: 61 - 70 of 532 results
  1. Rosella: A Fluorescent pH-Biosensor for Studying Autophagy

    Type
    Blog Post
    ...Monitoring Autophagy from Yeast to Human. Autophagy,3(3), 181-206. doi:10.4161/auto.3678. PubMed PMID:17224625...PMID: 26215030. PubMed Central PMCID: PMC4517063. 3. Mizushima, N., Yoshimori, T., & Levine, B. (2010)...Methods in Mammalian Autophagy Research. Cell,140(3), 313-326. doi:10.1016/j.cell.2010.01.028. PubMed ...17224625. 5. Noda, T., & Klionsky, D. J. (2008). Chapter 3 The Quantitative Pho8Δ60 Assay of Nonspecific Autophagy...information about the contents of the autophagosome nor does it provide information about what is being...higher pH of the vacuole. Read on to learn more about prior methods for studying autophagy and how Rosella... (as opposed to giving more fine-grained detail about what proteins or organelles are being degraded) ...
  2. A Needle in a Base-Stack: Cas9 Structural Biology

    Type
    Blog Post
    ...indicating that there is more to learn about this process!      Figure 3: Crystal structure of S. pyogenes...so crystal structures like those in Figures 2 and 3 don’t show these regions, even if they are present...other into the “closed” conformation shown in Figure 3. Though Cas9 is not a static molecule in any binding... RNA in this structure does not include stem loop 3, and guide RNA nucleotides 11-20 are not resolved ...required for Cas9 nuclease function. Stem loops 2 and 3 are not strictly necessary for in vitro cleavage, ...-20 are disordered and don’t appear in the Figure 3 crystal structure, reflecting the less stringent recognition...mismatches in this region. The crystal structure in Figure 3 shows the guide RNA stabilizing the DNA-binding protein...
  3. pCXLE toolkit: Efficient episomal plasmid-based method to reprogram peripheral blood cells to iPSCs

    Type
    Blog Post
    ...are closer to hiPSCs than age-matched fibroblasts [3]. These advantages make PBMCs the ideal source of...yielded hiPSCs at a low efficiency (0.001-0.03%) [3, 9]. In 2011, Chou et al. generated a mixture of two...PMID: 27579041. PubMed Central PMCID: PMC4989082. 3. Chou, B.K., et al., Efficient human iPS cell derivation...and gene expression signatures. Cell Res, 2011. 21(3): p. 518-29. PubMed PMID: 21243013. PubMed Central... and peripheral blood cells. Stem Cells, 2013. 31(3): p. 458-66. PubMed PMID: 23193063. 8. Ehrhardt, A...vectors for gene therapy. Curr Gene Ther, 2008. 8(3): p. 147-61. PubMed PMID: 18537590. 9. Mack, A.A.,...successfully to derive iPSCs from PBMCs. Most laboratories use Sendai virus to reprogram PBMCs efficiently...
  4. Sleeping Beauty Awakens for Genome Engineering

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    Blog Post
    ... Genet. 2009 Jun;41(6):753-61. Epub 2009 May 3. PubMed. 3. Singh H, et al. A new approach to gene therapy...an endonuclease reaction occurs which cuts the DNA.3.) The released transposon can now bind a strand of... overhangs depending upon whether they are on the 3’ or 5’ end of the gene of interest allowing for insertion...of DNA that can move around in a genome. In a laboratory setting, transposons can be used to both introduce...
  5. Crowdfight, a Platform to Boost Scientific Collaboration During COVID-19 and Beyond

    Type
    Blog Post
    ...the researchers did not have access to a P3 laboratory (BSL-3), a high-security facility needed to perform...suitability and availability; 3) Make the contact to start a direct collaboration between researcher and expert...our blog post about remote collaborations Read our Transferable Skills Guide article about external collaborations...needed. In the example above, for example, we fostered a formal scientific collaboration between two research...project. We think that these collaborations add enormous value. A discussion about a protocol can save weeks...approach was useful in humans. Then, one of them heard about our online platform, called Crowdfight, and filed...just the right infrastructure and offered to collaborate with them. The partnership was fruitful and a...
  6. Plasmids 101: Colony PCR

    Type
    Blog Post
    ...the supernatant of lysed bacteria as template; and 3) run your PCR product on a gel to analyze product ...step to colony PCR is designing primers. There are 3 strategies for primer design: 1) insert-specific primers... primers, 2) backbone-specific primers, and 3) orientation-specific primers.       Insert-specific ...and swirl in a small amount of sterile water.  Pick 3-10 colonies in total to test, depending on the number...negative clones. Finally, orientation-specific primers (3) give the same band (+) or no band (-) result as insert-specific...SLIC cloning Learn about Gibson Assembly Additional Resources on Addgene.org Read about Choosing a Molecular...this type of primer does not provide information about the orientation of the insert. Orientation-specific...
  7. The Addgene Antibody Data Hub

    Type
    Blog Post
    ...that information in the report as well.    Figure 3: An antibody data report, showing the results of an...methods section for the data report shown in Figure 3.   At the end of the report, you’ll find a results...Figure 5: Results for the data report shown in Figure 3. The antibody is rated "Pass". Curating the data ... antibody worked under the conditions described above, and a short description of how the antibody performed...
  8. Important Considerations When Using AAVs

    Type
    Blog Post
    ...): Where in the tissue/which cell type? Location (3): Traveling from the original location - Axonal Transport...regions where other serotypes may perform better (3). Brain Region  Optimal Serotype Striatum AAV5...(5), AAV6 (6) and AAV5 at excitatory connections (3). These facts beg the question: is axonal transport...Once thawed, the AAV aliquot should be used quickly. 3. Patience Is Bitter, but Its Fruit Is Sweet Time If... be determined what gene expression looks like at 3 days vs 7 days vs 14 days etc. To decrease the time...type of research, as they are safe to use in vivo. 3) The use of AAVs in humans AAVs are already being ...Therapy 16.6 (2008): 1073-1080. PubMed PMID: 18414476. 3. Aschauer, Dominik F., Sebastian Kreuz, and Simon ...
  9. Fluorescent Tagging of Endogenous Genes with SapTrap

    Type
    Blog Post
    ...desired gRNA target sequence, as well as the 5’ and 3’ homology arm repair template (Fig. 1, Step 1). There...marker, and connector to be released (Fig. 1, Step 2-3). Since donor plasmids of the same type will produce... proteins in a tissue specific manner, as well as 3-site destination vectors for inserting a tag at multiple...genes in human cells. To use CRISPaint, users need 3 vectors:  1) a gRNA vector that targets the gene of...to specify the reading frame of the insertion, and 3) a vector containing the desired tag, which can be...tagged gene. Most insertions can only be detected by labor-intensive processes like PCR or by evaluating visual...repair after a CRISPR/Cas9 induced break. Learn more about these constructs and the cell lines they’ve been...
  10. Three Tips for Preventing Viral Plasmid Recombination in Your Samples

    Type
    Blog Post
    ...lentiviral vector plasmid in Escherichia coli Stbl3. 3 Biotech 3:61–70. https://doi.org/10.1007/s13205-012-0070...be >12 kb. However if it recombines at the 5’ and 3’ LTR regions, it splits into two smaller plasmids.... Figure 2: An uncut plasmid is expected to form 3 bands: nicked, linear, and supercoiled. Here we find...molecular biology and viral vector protocols Learn about the common lab E. coli strains Find tips for viral...
Showing: 61 - 70 of 532 results