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We narrowed to 878 results for: ids

Showing: 121 - 140 of 878 results

  1. A Needle in a Base-Stack: Cas9 Structural Biology

    Type
    Blog Post
    ...in the apo state (PDB ID 4CMP, top) compared to the guide RNA-bound state (PDB ID 4ZT0, bottom), seen from...structure (left, PDB ID 4ZT0) with Cas9:RNA:DNA electron microscopy structure (right, PDB ID 7S4X), viewed from...structure of S. pyogenes Cas9 in the apo state (PDB ID 4CMP) with domains colored as in Figure 1. HNH, red...structure of S. pyogenes Cas9 bound to guide RNA (PDB ID 4ZT0), shown opaque (left) and transparent (right...pyogenes Cas9 bound to guide RNA and target DNA (PDB ID 7S4X). Residues R1333 and R1335 from the CTD (yellow...pyogenes Cas9 bound to guide RNA and target DNA (PDB ID 7S4X), shown opaque (left) and transparent (right...pyogenes Cas9 bound to guide RNA and target DNA (PDB ID 7S4X). The end of the DNA:RNA heteroduplex lies between...

  2. Hot Plasmids December 2018 - C. elegans RNAi, TurboID, Detecting Viral Outbreaks, and Protein Binding Specificity Tools

    Type
    Blog Post
    ...highlight a subset of the new plasmids in the repository through our hot plasmids articles. These articles ...hundred SH3 domain containing plasmids available through Addgene. These plasmids can be used to carry out ...'ll make it easier for you to find and use the plasmids you need. If you'd ever like to write about a ...deposit please sign up here.  Listen to the hot plasmids episode! New, highly efficient RNAi construct ...the T444T plasmid here! Strum A, et al. Nucleic Acids Research. 2018 PubMed PMID: 29924347 Faster proximity... Drosophila and C. elegans.   Find the TurboID plasmids here! Branon et al. Nat Biotechnol. 2018 PubMed... detect Zika virus (available at Addgene). The plasmids for detecting norovirus will be coming soon! Ma...

  3. Hot Plasmids - June 2020 - Barcoded CRISPR Library, Sparse Cell Labeling, Calcineurin Reporter, and DNA Staining Dye Alternative

    Type
    Blog Post
    ...highlight a subset of the new plasmids in the repository through our hot plasmids articles. These articles ...'ll make it easier for you to find and use the plasmids you need. If you'd ever like to write about a ...attached fluorescent protein to the DNA. They created plasmids for purification of tTALE-eGFP and tTALE-mCherry...digestion of single molecules in real-time. Find plasmids expressing tTALE-FP Shin et al., Sci. Rep. 2019...

  4. Increasing Your Work's Visibility with Addgene: Citation, Search, and Collections

    Type
    Blog Post
    ... of every page. You can search for plasmids by name, PI, Addgene ID number, or keyword. Although an initial...we request that you cite it using both its Addgene ID number as well as the reference for its original ...cite a plasmid from Addgene using its unique Addgene ID number, your publication will be listed on our website...spotlight some of the plasmids that have come through our doors in our “Hot Plasmids” section. We’ve also...Special Collections Pages Suggest Plasmids for the Repository Find Plasmids for Your Research  ... strives to make it easier for you to find the plasmids and publications relevant to your research interests...facilitate this process, we explain how to cite plasmids from Addgene right on our plasmid pages and provide...

  5. Searchable and Sortable gRNAs for Your Next CRISPR Experiment

    Type
    Blog Post
    ...Addgene plasmid ID (if we have one associated with the gRNA), application, cas9 species, PubMed ID, and depositor...gRNA-containing plasmids (McDade et al, 2016). Many of the gRNAs contained within these plasmids have been ...scientists’ submissions, either their deposited gRNA plasmids or from submission of a spreadsheet containing...please consider submitting their sequences (and plasmids!) so that this shared resource can continue to... Tools Read Our CRISPR Guide Pages Find CRISPR Plasmids  ...

  6. Tips from the Repository Trenches: Using Barcodes to Track Samples

    Type
    Blog Post
    ...and make sure they have been barcoded with a unique ID number (1D barcode as shown below). This number ensures...samples. They will help your lab ensure that sample ID’s are unique, consistently labeled, and that numbers...barcode to the container holding the tubes and use this ID to name the corresponding Excel sheet.3. Be specific... Inside Addgene Posts! Learn all about Plasmids in our Plasmids 101 series! ... to hundreds of samples, with an average of 10 plasmids per deposit. Each week an average of 16 deposits...strains that have been treated to easily take in plasmids (transformation). Transformed bacteria are then...stable, ccdb survival, and Pir1. The majority of plasmids contain either an ampicillin or kanamycin resistance...

  7. Behind the scenes: Addgene’s new search engine and more

    Type
    Blog Post
    ...shortcut to a search scoped to that category. Catalog ID suggestions provide shortcuts to specific catalog...example, a kit that contains a plasmid with the catalog ID). Depositor suggestions provide shortcuts to matching...and depositors — each with subcategories such as plasmids and viral preps for catalog, blog posts and protocols... and category. For example, a search scoped to plasmids shows filters for expression and vector type, ...

  8. CasPEDIA: A Functional Classification of Cas Enzymes

    Type
    Blog Post
    ...AsCas12a plasmids, Addgene and CasPEDIA have got you covered!     Fig. 1 – CasPEDIA Cas ID display...simply type in identifier keywords (Cas name, RefSeq ID, etc.) and you will see a table of protein entry ...resources The homepage displays a graphic describing CasIDs and relevant properties of Cas enzymes. That’s ...find a link to search Addgene's collection for plasmids containing that enzyme, and embedded in the References...lists on every page you can find direct links to plasmids from the article if they're available through ...

  9. pCXLE toolkit: Efficient episomal plasmid-based method to reprogram peripheral blood cells to iPSCs

    Type
    Blog Post
    ...Addgene. Table 1: List of pCXLE episomal plasmids, their Addgene ID numbers and the reprogramming factors...factors they encode Episomal Plasmid Addgene ID# Encodes pCXLE-hSK 27078 SOX2 and KLF4 pCXLE-hUL 27080...and to model diseases in vitro. Find stem cell plasmids at Addgene Many sources of adult somatic cells...Episomal vectors- extrachromosomally maintained DNA plasmids that express reprogramming factors To date, the...group is an optimized mixture of three episomal plasmids (Table 1) encoding the reprogramming factors. ...increases protein expression from the other episomal plasmids. When used on PBMCs, the pCXLE episomal vector...Factor Fusions for Enhanced Reprogramming Find plasmids from the Yamanaka Lab ...

  11. We're Updating Our Hold for Publication Policy

    Type
    Blog Post
    ... your deposit or plasmid ID numbers and we’ll be happy to update the plasmids to add the citation and ...will release plasmids on hold if they are clearly described in a journal publication. Plasmids will be released...and unpredictable. Fortunately, you can submit plasmids at any point in that process and we provide an...necessary quality control and legal approvals so the plasmids are ready for distribution as soon as the paper...better addition to peer review than having your plasmids sequenced and openly registered for other scientists...put in us when you choose this status for your plasmids. In fact, almost half of all new deposits start...hold! You will always have control over when your plasmids are distributed. Next month, we are making two...

  12. Viral Genome Sequencing - A One Stop Shop for AAV Identity and Serotype Confirmation

    Type
    Blog Post
    ..., Moullier P, Ayuso E, Vandenberghe LH (2017) AAV-ID: A Rapid and Robust Assay for Batch-to-Batch Consistency... the packaging cell line, helper and packaging plasmids. We decided to use this to our advantage by designing...Next-generation Sequencing. Molecular Therapy - Nucleic Acids 4:e260 . https://doi.org/10.1038/mtna.2015.32 Maynard...

  13. Hassle-free 96-well Format Epitope Tagging Using Cas9 Ribonucleoprotein

    Type
    Blog Post
    ...tagging experiments: Retrieve Ensembl Transcript ID(s) of your favourite gene(s) from Ensembl genome ...index.html Design crRNA/ssODN: Using Ensembl Transcript ID(s) as an input query, pick crRNA (guide RNA sequence...on the Addgene Blog Plasmids for endogenous gene tagging in human cells Plasmids 101: Protein Tags Fluorescent...SapTrap Resources on Addgene.org Browse CRISPR plasmids Check out our CRISPR guide pages Find ready-to-use...

  14. Dos & Don'ts When Publishing a Scientific Manuscript

    Type
    Blog Post
    ... asked to add an identifier (a bit like a GenBank ID) to all antibodies, animal models, and software tools...numbers and manufacturers’ details for antibodies, plasmids (like your Addgene plasmid #), and other reagents...

  15. Summer SciComm: Preprints

    Type
    Blog Post
    ...Plus, authors can include the Addgene ID for their deposited plasmids in the final journal publication or...deposits of plasmids that have been described in a preprint. In fact, over 1,500 plasmids in our catalog...Depositing plasmids that were used in a preprint provides all the same benefits as sharing those plasmids alongside...

  17. New Tool for Lineage Tracing: The ClonTracer Library

    Type
    Blog Post
    ...worked for three years as a post-doc in the Target ID and Validation Group and says that she decided to... ClonTracer Library at Addgene Find Lentiviral Plasmids at Addgene Check out Our Cancer Resources Page...

  18. Enhancing CRISPR Targeting Specificity with eSpCas9, SpCas9-HF1, & HypaCas9

    Type
    Blog Post
    ...Looking at the structure of the Cas9 nuclease (PDB ID: 4OO8 and 4UN3), Slaymaker et al. hypothesized that...evidenced by all the CRISPR publications, press, and plasmids out there, it’s obvious that CRISPR is a ground-breaking...compared to eSpCas9(1.1) and SpCas9-HF1. The HypaCas9 plasmids are available from Addgene here! Future possibilities... (2015): aad5227. PubMed PMID: 26628643. Find plasmids from this publication at Addgene. 2. Nishimasu..." Nature (2016).  PubMed PMID: 26735016. Find plasmids from this publication at Addgene. 5. Chen, JS...." Nature (2017). PubMed PMID: 28931002. Find plasmids from this publication at Addgene. Resources on... Resources on the Addgene Website Find CRISPR Plasmids Browse our CRISPR Guide Pages Find Genome Engineering...

  19. Lab Automation at Addgene

    Type
    Blog Post
    ...removable parts to fit on the deck of the Biomek. The FXP id also able to do high throughput DNA preps and other... scientists share plasmids across the globe, we’re working on ways to send plasmids as DNA as opposed ...Automating vial fiIling The majority of Addgene plasmids are shipped as agar stabs in glass vials. Have...

  20. Common Injection Routes in Mice

    Type
    Blog Post
    ...Skill required: beginner Intradermal Intradermal (ID) injections occur between the layers of the skin....Engineering Guide CRISPR Mammalian Expression plasmids Cre-Lox plasmids References Prathipati, P., Rodriguez-Aguayo...
Showing: 121 - 140 of 878 results