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  1. Antibodies 101: Choosing the Right Isotype

    Type
    Blog Post
    Published
    April 6, 2023, 3 p.m.
    ...antibodies and found that across suppliers there was a detection bias of IgG2a>IgG2b>IgG1 (Manning 2012).    ... the anti-mouse secondary antibodies used for detection bind to non-target immunoglobulins naturally present.... Chapter 15 Postembedding Immunocytochemical Techniques for Light and Electron Microscopy. In Methods...
  2. Plasmids 101: Modular Cloning

    Type
    Blog Post
    Published
    March 12, 2024, 1:15 p.m.
    ...described above, and not any particular cloning technique. Though rarer, you can find MoClo that relies ...assembled into many combinations. Even with current technologies, it can be extremely hard to predict how a single... if you want to learn more about this cloning technique! Many thanks to Rob Hurt for his help on this ...
  3. 5 Tips for Troubleshooting Viral Transductions

    Type
    Blog Post
    Published
    Aug. 11, 2016, 2:23 p.m.
    ...biological tasks, both of which are factors in the technical challenges they can present. Many researchers ...hail Marys that have helped me troubleshoot some technical obstacles when working with virus: 1. Viral vectors... quantification as measured with branched-DNA technology." Journal of clinical microbiology 37.6 (1999...
  4. Cpf1 Update: Comparison to Cas9 and NgAgo

    Type
    Blog Post
    Published
    July 14, 2016, 2:30 p.m.
    ...predicted off-target sites, Cpf1 does not mediate detectable off-target cleavage. Most gRNAs directed low-...specificities of Cpf1 endonucleases in human cells. Nat Biotechnol. 2016 Jun 6. PubMed PMID: 27272384 Find plasmids...-Cas Cpf1 nucleases in human cells." Nature Biotechnology (2016). PubMed PMID: 27347757. Find plasmids...
  5. Plasmids 101: FLEx Vectors

    Type
    Blog Post
    Published
    April 28, 2016, 2:30 p.m.
    ... Figure 1 (modified from Schnutgen et al. Nat Biotech 2003): Basic FLEx switch will express BFP in the... Figure 2 (modified from Schnutgen et al. Nat Biotech 2003): In the presence of Cre, GFP expression is... able to distribute materials containing FLEx technology. Read the genOway press release for more information...
  6. Plasmids 101: Terminators and PolyA signals

    Type
    Blog Post
    Published
    March 31, 2016, 2:30 p.m.
    ...degradosome, which contains enzymes that cut RNA not protected by secondary structure. It is thought that poly... tail is important for stability of the mRNA, protection from degradation, and is integral to the nuclear...Controls Gene Expression Learn about New Cloning Techniques Read all of our Plasmids 101 Posts Resources...
  7. Cloning Mammalian Cells with the Agarose Method

    Type
    Blog Post
    Published
    Sept. 7, 2017, 12:17 p.m.
    ...Advantages of the agarose cloning method The agarose technique should be useful to scientists who wish to rapidly... from a population of transfected clones. The technique is applicable to a wide variety of cell lines,...physiological properties. An advantage of this technique is the potentially large number of single clones...
  8. Truncated gRNAs for Regulating Gene Expression

    Type
    Blog Post
    Published
    Jan. 10, 2017, 3:37 p.m.
    ...Biologically Inspired Engineering. CRISPR/Cas9 technology has revolutionized the fields of molecular biology...discovery through the creation of innovative technologies. To date his group has develop several popular...catalytically active Cas9 nuclease." Nature biotechnology (2015). PubMed PMID: 26436575. PubMed Central...
  9. Academic vs. Industry Postdocs

    Type
    Blog Post
    Published
    Nov. 13, 2018, 1:22 p.m.
    ...understanding of the fast, deadline-driven pace of biotech. In other words, industry postdocs already have...Biogen, Amgen, New England Biolabs, Regeneron, and Genentech, among others, and the list is growing. Some post... a position open up. Other companies, such as Genentech, will not. The point is that each company has ...
  10. Tips for a 1st time AAV user (by a Rookie AAV user)

    Type
    Blog Post
    Published
    Oct. 23, 2018, 11:49 a.m.
    ...the AAV production process. Either SYBR green technology or a TaqMan primer/probe set can be used and ...sample for the DNAseI digest. Use good sterile technique when handling your AAV plasmid standard and AAV...Baiker, A. (2012). Universal real-time PCR for the detection and quantification of adeno-associated virus serotype...
  11. No Llamas Required - Synthetic Nanobodies Against Membrane Proteins

    Type
    Blog Post
    Published
    June 18, 2020, 1:15 p.m.
    ...plasmid, using the fragment exchange (FX) cloning technique which uses Type IIS restriction sites (Geertsma...protein of interest. The Seeger lab used the ELISA technique described in their protocol because it is less...protein is added and after a few washes, binding is detected using a colorimetric reaction. After the ELISA...
  12. PCR Applications for Copy Number Variation Assays

    Type
    Blog Post
    Published
    April 26, 2022, 1:15 p.m.
    ... on and so forth. This also serves as a light technical control - an RQ value of 1.5 means you have either...chemistry (see image, left, of droplet immersion technique, courtesy of CAR15.) Each droplet contains a primer...Molecular Biology Reference Molecular Cloning Techniques References Bell AD, Usher CL, McCarroll SA. ...
  13. Viral Vectors 101: Producing Your rAAV

    Type
    Blog Post
    Published
    July 16, 2024, 1:15 p.m.
    ...Baiker, A. (2012). Universal real-time PCR for the detection and quantification of adeno-associated virus serotype...adeno-associated virus vectors with sensitivity sufficient to detect single infectious events. Human Gene Therapy, 15...addgene.org  AAV Titration by qPCR Using SYBR Green TechnologyAAV Titration by ddPCRAAV Purification by Iodixanol...
  14. Viral Vectors 101: Voltage Indicators

    Type
    Blog Post
    Published
    Jan. 30, 2024, 2:15 p.m.
    ... where rhodopsin functions as both the voltage detector and fluorescent signaler. The pro of this system...several targeting domains. The quencher and voltage detector in this system was dipicrylamine, a lipophilic...high-speed, bright, red fluorescent voltage sensor to detect neural activity. Sci Rep 9, 15878 (2019). doi: ...
  15. CRISPR 101: Mammalian Expression Systems and Delivery Methods

    Type
    Blog Post
    Published
    Sept. 24, 2015, 2:30 p.m.
    ...updated Sep 30, 2020 by Marcy Patrick. CRISPR technology has been widely adopted for genome editing purposes...cheaper, faster, and easier than prior editing techniques. More and more CRISPR tools are being published...how you will evaluate the outcome: Will you be detecting insertions/deletions using a mismatch repair assay...
  16. AAVs in Retinal Gene Therapy

    Type
    Blog Post
    Published
    July 31, 2018, 12:55 p.m.
    ...therapy. The year was 2001 and I started a job as a technician in a lab using adeno-associated viral vectors... I quickly became fascinated by this emerging technology and its potential for the treatment of some genetic...research is being done to further improve the technology: engineering of new capsid variants, designing...
  17. Simplify Cloning with in vivo Assembly

    Type
    Blog Post
    Published
    Oct. 18, 2018, 12:37 p.m.
    ...experimental process. The majority of current cloning techniques involve the assembly of a circular plasmid in... 1991, Bubeck et al., 1993). But why did this technique fail to gain traction? It is likely that both ...ends on DNA using polymerase chain reaction." Biotechniques 10.1 (1991): 62-66. PubMed PMID: 2003926. 2....
  18. A Guide to Starting Your Own Journal Club

    Type
    Blog Post
    Published
    Feb. 6, 2020, 3 p.m.
    ...club occurs with a small technical team (single lab or team), a deep technical dive on single papers could...must stay current with literature and emerging technologies to remain competitive and relevant. Enter: the...
  19. AAVs CREATed for Gene Delivery to the CNS and PNS

    Type
    Blog Post
    Published
    Sept. 28, 2017, 2:01 p.m.
    ...CNS and PNS.That is until the Gradinaru Lab at Caltech stepped up to the challenge. Find the PHP Plasmids...Recombinase-based AAV Targeted Evolution. In this technique, a pool of mutant AAV capsid (cap) expressing ...widespread gene transfer to the adult brain. Nature biotechnology. 2016;34(2):204-209. PubMed PMID: 26829320. ...
  20. Plasmids 101: Colony PCR

    Type
    Blog Post
    Published
    May 12, 2016, 2:30 p.m.
    ...key steps to colony PCR are: 1) design primers to detect the presence of your insert; 2) set up a standard...Running a no template control PCR reaction for detecting contamination is also a good idea.    Analyzing....org Read about Choosing a Molecular Cloning Technique Learn to Perform a Bacterial Transformation Deposit...
  21. CRISPR Antimicrobials

    Type
    Blog Post
    Published
    May 3, 2016, 2:30 p.m.
    ...reduce this likelihood. The key problem with these techniques is efficient delivery, as the antimicrobial must...efficiently-delivered RNA-guided nucleases.” Nature Biotechnol. 32(11): 1141-5. (2014). PubMed: PMID 252409288...produce sequence-specific antimicrobials.” Nature Biotechnol. 32(11): 1146-50. (2014). PubMed: PMID 25282355...
  22. Your Lentiviral Plasmid FAQs Answered

    Type
    Blog Post
    Published
    April 23, 2014, 1:08 p.m.
    ...offer the maximal biosafety available for the technology. The minor limitation in using the 3rd-generation...scientists often refer to as “retroviruses” are technically gamma-retroviruses - another, separate member...transfer vectors for transient transfections? A2: Technically, yes. Will it actually work? That depends. The...
  23. Deciphering the Mysteries of Behavior with Viral Vectors

    Type
    Blog Post
    Published
    Sept. 17, 2019, 12:40 p.m.
    ...have a natural preference to stay in dark areas (protected) as opposed to brightly illuminated ones (risky...environments by initially moving along a wall (protected) rather than being out in the open (risky). Taking...comprised of a brightly lit (risky) and a dark (protected) area. When measuring the time spent in a particular...
  24. To Codon Optimize or Not: That is the Question

    Type
    Blog Post
    Published
    Nov. 12, 2020, 2:15 p.m.
    ...expression. Trends in Biotechnology 22:346–353 . https://doi.org/10.1016/j.tibtech.2004.04.006 Hausser ... be used in some in vivo experiments and in biotechnology and therapeutics (Mauro and Chappell 2014).  ...
  25. Four Base Editing Reporters to Monitor and Enrich Editing in Real-time

    Type
    Blog Post
    Published
    July 7, 2020, 1:15 p.m.
    ...the Dow lab created a base editing reporter that detects and enriches for base editing events in vivo without...conversion) they could induce the translation of any detectable protein, not just fluorescent proteins. ...protein expression, it can be used for an array of detectable proteins including fluorescent proteins, antibiotic...
  26. Hot Plasmids - November 2023

    Type
    Blog Post
    Published
    Nov. 14, 2023, 3:35 a.m.
    ...two deposits that increase the utility of this technique.  By engineering a light-sensitive LOV domain ... tapes for intracellular recordings. Nature Biotechnology, 41(5), 631–639. doi: 10.1038/s41587-022-01524... using thick-section and whole-mount labeling techniques. The Trimmer lab’s anti-PSD-95 [K28/43R] recently...
  27. CRISPR 101: Any Base Transversion Editors

    Type
    Blog Post
    Published
    April 1, 2025, 1:15 p.m.
    ...editing in mammalian cells and embryos. Nature Biotechnology, 42(4), 638–650. https://doi.org/10.1038/s41587...with an N-methylpurine DNA glycosylase. Nature Biotechnology, 41(8), 1080–1084. https://doi.org/10.1038/s41587...and C-to-G editing in mammalian cells. Nature Biotechnology, 42(10), 1538–1547. https://doi.org/10.1038/...
  28. Twenty Years of Sharing: Expanding Accessibility

    Type
    Blog Post
    Published
    Nov. 21, 2024, 10:47 p.m.
    ...Leehyo Bioscience 2015 Korea San Diego Biotech Lab 2018 Mexico e-nnovation Life Sciences...Sciences 2020 India Sinapse Biotecnologia 2022 Brazil   In some cases, the distributors broadly...best part of any conference is scientists, from techs to grad students to professors, stopping by to say...
  29. New Acoustic Reporter Genes: Ultrasound Imaging of Gene Expression

    Type
    Blog Post
    Published
    Jan. 24, 2023, 2:15 p.m.
    ...integrate the mARGs using PiggyBac. Gas vesicles are detectable under ultrasound and phase contrast microscopy...bioengineering. They are both members of the Shapiro lab at Caltech.   References and Resources References Piraner...monitoring of tumors and tumor-homing bacteria. Nat Biotechnol 1–13 (2023) doi:10.1038/s41587-022-01581-y   ...
  30. Controlling for Off-target Effects with a New Genome-wide CRISPR Screen Design

    Type
    Blog Post
    Published
    Sept. 13, 2018, 1:55 p.m.
    ...the screen. This toxicity was used a proxy for detecting Cas9 cutting. Safe targeting guides better control...off-target cleavage by CRISPR-Cas nucleases." Nature biotechnology 33.2 (2015): 187. Pubmed PMID: 25513782. Pubmed...specificity using truncated guide RNAs." Nature biotechnology 32.3 (2014): 279. Pubmed PMID: 24463574. Pubmed...
Showing: 331 - 360 of 685 results