We narrowed to 528 results for: Set

...convex scaffold and are randomized with a defined set of different trinucleotides (corresponding to different...

... notice for the first meeting so that people can set aside time in their schedules and read the paper ...). This notice can be shortened as the meeting settles in and people get the time recurrently carved out...

...chromoproteins are actually a subset of the fluorescent protein family. What sets them apart is the way they...

...list of posters of interest, then you’ve already set yourself up for success. But sometimes, attendees...

...a large number of hits to one sequence/gene - we set our threshold at >100 hits - immediately raises a...

...containing serum in each well. A 200 ul pipettor is set to 200 ul, wiped down with 70% ethanol, and a box...

...Pathway Clone Collection 2.0. The collection is a set of vectors for use with the Gateway Cloning Platform...

...there include: Google Groups - I've specifically set up a forum where NgAgo users can share protocols ...

...allow for two sets of microhomologies (5’ and 3’) to anneal, knocking the GFP-Puro cassette into the locus...protocol for MMEJ-mediated knock-in of a GFP-Puro cassette into a given locus, just upstream of a stop codon...microhomology to the insertion locus flanking the GFP-Puro cassette. Three double stranded breaks are necessary for...for knock-in: one on either side of the GFP-Puro cassette and one in between the 5’ and 3’ microhomologies...of PITCh. The PITCh plasmid contains a GFP-Puro cassette flanked by 5' and 3' microhomology and PITCh-gRNA...creates two DSBs in the PITCh plasmid to release the cassette, and an insertion-locus-specific gRNA cleaves ...and 3’ microhomologies are added to the GFP-Puro cassette via PCR, and this construct is inserted into the...

... brightness is compared to that of EGFP which is set as 1. Some proteins are very dim (e.g. TagRFP657,...

...This modular approach combines an interchangeable set of fusogenic and targeting components to reprogram...Every few months, we highlight a subset of the new plasmids, antibodies, and viral preps in the repository...

...it’s simple. The RT protein is made by a separate set of instructions in the same producer cells as the...

...have become a powerful tool to address a diverse set of biological inquiries. References Ogura, Teru...death. The team used this cassette to knock out genes, knock in a GFP cassette, and introduced site-directed...for Zeocin resistance (Figure 2). This MazF-ZeoR cassette is flanked by two direct repeats which can be ... selects for those cells that have removed the cassette through a second recombination event between the...

...Either SYBR green technology or a TaqMan primer/probe set can be used and samples are quantified by comparing...

...difficult to use in a multicolor/multichannel imaging set-up. In contrast, smFP tags can be recognized by distinct...

... used successfully in preclinical and clinical settings for ocular conditions. However, AdV was abandoned...responsible for an autosomal recessive, severe, childhood-onset form of blindness name Leber’s Congenital Amaurosis... of new capsid variants, designing expression cassettes to regulate and optimize transgene levels, and...

...working on one process at a time, and testing a small set of data each time a new process was added, we progressively...easily shared with others without any complicated setup. We created, tested, and debugged each of our pipeline...

...that do not express the protein. With this control set, you should see your target protein IP’d in the positive...

...be useful for your studies.  Find the plasmids to set up your screening systems at Addgene! Schematic...Every few months we highlight a subset of the new plasmids and viral preps in the repository through ...

...nature, they are largely underutilized in research settings — mostly a consequence of Cascade's complexity...

... for saving time and avoiding potentially costly set-ups. However, there are many cases where the specific...

...antigen or an antibody depending on how the assay is set up. Then they block the capture reagent to prevent...binding to a primary antibody.  While the precise setup of the method can vary, typically users first coat...

...facilitates the use of prime editing in pooled settings with hundreds to thousands of pegRNAs. Chromatin-based...primer binding site, and many more. Once we had our datasets with all the different features and editing efficiencies...PRIDICT2.0 (Mathis et al., 2024). The additional datasets used in the training of PRIDICT2.0 make this model...

...mice CRISPRa has largely been limited to in vitro settings due to the large size of Cas9 activators, which...packaging limits (i.e., how many sgRNA expression cassettes will fit). Cre-dependent expression of the SPH...

...the day of your chalk talk Bring your own fresh set of erasable markers. You’ll have the colors you want...research? Do you have innovative tools? A novel dataset? Unique expertise? A novel hypothesis? Part of ...

...sales-y”. The work includes reviewing customer data sets, troubleshooting protocols, analyzing information...

...and/or perceived professional risk involved in setting up a CURE, especially if it’s a new approach within... amenable to in-class labs. Provost ultimately settled on a two-semester model, in which students learn...

... the use of a given timer in many experimental settings. Monomeric fluorescent protein timers Since the... simplifies cloning and makes your experimental setup less cumbersome. 3. Portability across multiple ...

...sequences of the genetic elements may differ (e.g., a set of various mammalian promoters), the same cloning...sequences. Intermediate chaining products (called “cassettes”) can be readily reused in the assembly of any...any later construct (i.e.,functional cassettes are recyclable) Can only work if the restriction sites used...

...discovered in 1856 by William Perkin. His discovery set off a flurry of activity and the majority of the ...

.... suggest that it could be valuable in medical settings where antibiotic resistant bacteria have previously...Even when researchers develop new antibiotics, the onset of resistance is swift, as few as five years after...

...example, with standard fluorescent microscope filter sets, users can label multiple proteins of interest with...

...Fridays. From each overnight culture, we prepare three sets of 2D barcoded tubes. Two of the tubes are used ...

...independent variable. Biological replicates In any given set of experiments, the biological controls are more ...

...multiple genes is valuable in many experimental settings. To achieve this, scientists use a multitude of...individual expression cassettes, having the genes expressed from the same cassette is sometimes advantageous...and you can then insert the whole multicistronic cassette into a backbone as a single unit. Although it ...

...your “gating strategy.” This series of markers are set up sequentially, from broadest to most specific marker...Subtypes of immune cells are often defined by a subset of the markers used to identify them, such as “...

... document examples are not especially helpful. I set out to make something practical and accessible. If...

...team members only, under the specific permissions set for every member of your team. Do you need to make...

...gene-targeting capabilities of full-length SpCas9. This set of plasmids includes AAV-Cas9C-VPR for targeted gene...genes in human cells using compact expression cassettes. Sci Rep 5: . https://doi.org/10.1038/srep10777...

...it’s a combination of many factors unique to this set of tools and the community they serve. As difficult...validating and using an AAV in a specific experimental setup. Teams across Addgene have worked hard to ensure...compared to other AAVs preps from 2016–2023. B) Inset showing distribution of only GCaMP6, jGCaMP7, and...

...frogs, mice, and even humans. It binds to a specific set of DNA-binding transcription factors to repress the...

...in the best-case scenario [7]. In the clinical setting where patient blood samples are limited, such low...by Kusumika (Kushi) Mukherjee, a Postdoc at Massachussetts General Hospital. A little over a decade back...Mukherjee is currently a postdoctoral fellow at Massachusetts General Hospital with research interests in ...

... (Cong et al, Mai et al) we were very excited to set up a CRISPR-based editing platform in our lab. Our...

...If your lab owns a liquid handling robot, you can set it up to automate the reagent transfer and the restriction–ligation...

...forums on particular topics. Volunteer moderators set the rules for these forums and try to keep discussions...

...Tempurature: Analyze your expression conditions by setting up a small-scale expression experiment to test ...StrR, TetR) Expression of insoluble proteins  Rosetta2 (DE3)* Chloramphenicol (pRARE) Good for “universal... plasmid contains a chloramphenicol resistance cassette for positive selection and a p15A origin of replication...

...co-factor, (iii) easy visualization with standard filter sets on a fluorescence microscope, and finally (iv) good...

...range. With this in mind, Ed Boyden and colleagues set out to engineer a potassium ion biosensor with a ...

... this skill that you could strengthen. The right set of transferable skills, coupled with your technical...know you are bringing this asset to your job, you can become a valuable asset yourself.     Fig... point of view and can’t understand why they’re upset, conflict resolution is likely not one of your strengths...

...mutagenesis is especially concerning in clinical settings, as evidenced by retroviral gene therapy trials...