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pENTR5'_ubi Citations (23)

Originally described in: Ubiquitous transgene expression and Cre-based recombination driven by the ubiquitin promoter in zebrafish.
Mosimann C, Kaufman CK, Li P, Pugach EK, Tamplin OJ, Zon LI Development. 2011 Jan . 138(1):169-77. PubMed Journal

Articles Citing pENTR5'_ubi

Articles
Exclusive multipotency and preferential asymmetric divisions in post-embryonic neural stem cells of the fish retina. Centanin L, Ander JJ, Hoeckendorf B, Lust K, Kellner T, Kraemer I, Urbany C, Hasel E, Harris WA, Simons BD, Wittbrodt J. Development. 2014 Sep;141(18):3472-82. doi: 10.1242/dev.109892. Epub 2014 Aug 19. PubMed
A Modular Approach to Building Complex Synthetic Circuits. Li Y, Weiss R. Methods Mol Biol. 2017;1651:231-248. doi: 10.1007/978-1-4939-7223-4_17. PubMed
Tol2 transposon-mediated transgenesis in the Midas cichlid (Amphilophus citrinellus) - towards understanding gene function and regulatory evolution in an ecological model system for rapid phenotypic diversification. Kratochwil CF, Sefton MM, Liang Y, Meyer A. BMC Dev Biol. 2017 Nov 23;17(1):15. doi: 10.1186/s12861-017-0157-x. PubMed
Neutrophil-specific knockout demonstrates a role for mitochondria in regulating neutrophil motility in zebrafish. Zhou W, Cao L, Jeffries J, Zhu X, Staiger CJ, Deng Q. Dis Model Mech. 2018 Mar 28;11(3). pii: dmm.033027. doi: 10.1242/dmm.033027. PubMed

Associated Plasmids
Visualization of Cellular Electrical Activity in Zebrafish Early Embryos and Tumors. Silic MR, Zhang G. J Vis Exp. 2018 Apr 25;(134). doi: 10.3791/57330. PubMed

Associated Plasmids
PAX3-FOXO1 transgenic zebrafish models identify HES3 as a mediator of rhabdomyosarcoma tumorigenesis. Kendall GC, Watson S, Xu L, LaVigne CA, Murchison W, Rakheja D, Skapek SX, Tirode F, Delattre O, Amatruda JF. eLife. 2018 Jun 5;7. pii: 33800. doi: 10.7554/eLife.33800. PubMed

Associated Plasmids
A tRNA-based multiplex sgRNA expression system in zebrafish and its application to generation of transgenic albino fish. Shiraki T, Kawakami K. Sci Rep. 2018 Sep 6;8(1):13366. doi: 10.1038/s41598-018-31476-5. PubMed
Live Tracking of Inter-organ Communication by Endogenous Exosomes In Vivo. Verweij FJ, Revenu C, Arras G, Dingli F, Loew D, Pegtel DM, Follain G, Allio G, Goetz JG, Zimmermann P, Herbomel P, Del Bene F, Raposo G, van Niel G. Dev Cell. 2019 Feb 25;48(4):573-589.e4. doi: 10.1016/j.devcel.2019.01.004. Epub 2019 Feb 7. PubMed
Unlimited Genetic Switches for Cell-Type-Specific Manipulation. Garcia-Marques J, Yang CP, Espinosa-Medina I, Mok K, Koyama M, Lee T. Neuron. 2019 Oct 23;104(2):227-238.e7. doi: 10.1016/j.neuron.2019.07.005. Epub 2019 Aug 5. PubMed
Cell cycle dynamics during diapause entry and exit in an annual killifish revealed by FUCCI technology. Dolfi L, Ripa R, Antebi A, Valenzano DR, Cellerino A. Evodevo. 2019 Nov 8;10:29. doi: 10.1186/s13227-019-0142-5. eCollection 2019. PubMed
Functional architecture underlying binocular coordination of eye position and velocity in the larval zebrafish hindbrain. Brysch C, Leyden C, Arrenberg AB. BMC Biol. 2019 Dec 29;17(1):110. doi: 10.1186/s12915-019-0720-y. PubMed
A genetic modifier of venous thrombosis in zebrafish reveals a functional role for fibrinogen AalphaE in early hemostasis. Freire C, Fish RJ, Vilar R, Di Sanza C, Grzegorski SJ, Richter CE, Shavit JA, Neerman-Arbez M. Blood Adv. 2020 Nov 10;4(21):5480-5491. doi: 10.1182/bloodadvances.2020001472. PubMed
Venous Thrombosis and Thrombocyte Activity in Zebrafish Models of Quantitative and Qualitative Fibrinogen Disorders. Fish RJ, Freire C, Di Sanza C, Neerman-Arbez M. Int J Mol Sci. 2021 Jan 11;22(2). pii: ijms22020655. doi: 10.3390/ijms22020655. PubMed
Modulation of bioelectric cues in the evolution of flying fishes. Daane JM, Blum N, Lanni J, Boldt H, Iovine MK, Higdon CW, Johnson SL, Lovejoy NR, Harris MP. Curr Biol. 2021 Nov 22;31(22):5052-5061.e8. doi: 10.1016/j.cub.2021.08.054. Epub 2021 Sep 16. PubMed
Dysregulated heparan sulfate proteoglycan metabolism promotes Ewing sarcoma tumor growth. Vasileva E, Warren M, Triche TJ, Amatruda JF. Elife. 2022 Mar 14;11:e69734. doi: 10.7554/eLife.69734. PubMed
TEMPO enables sequential genetic labeling and manipulation of vertebrate cell lineages. Espinosa-Medina I, Feliciano D, Belmonte-Mateos C, Linda Miyares R, Garcia-Marques J, Foster B, Lindo S, Pujades C, Koyama M, Lee T. Neuron. 2023 Feb 1;111(3):345-361.e10. doi: 10.1016/j.neuron.2022.10.035. Epub 2022 Nov 22. PubMed
Localized heterochrony integrates overgrowth potential of oncogenic clones. Blum N, Harris MP. Dis Model Mech. 2023 Feb 1;16(2):dmm049793. doi: 10.1242/dmm.049793. Epub 2023 Feb 8. PubMed
VGLL2-NCOA2 leverages developmental programs for pediatric sarcomagenesis. Watson S, LaVigne CA, Xu L, Surdez D, Cyrta J, Calderon D, Cannon MV, Kent MR, Silvius KM, Kucinski JP, Harrison EN, Murchison W, Rakheja D, Tirode F, Delattre O, Amatruda JF, Kendall GC. Cell Rep. 2023 Jan 31;42(1):112013. doi: 10.1016/j.celrep.2023.112013. Epub 2023 Jan 18. PubMed
A single-shot hyperspectral phasor camera for fast, multi-color fluorescence microscopy. Wang P, Kitano M, Keomanee-Dizon K, Truong TV, Fraser SE, Cutrale F. Cell Rep Methods. 2023 Mar 31;3(4):100441. doi: 10.1016/j.crmeth.2023.100441. eCollection 2023 Apr 24. PubMed
The class VIII myosin ATM1 is required for root apical meristem function. Olatunji D, Clark NM, Kelley DR. Development. 2023 Oct 15;150(20):dev201762. doi: 10.1242/dev.201762. Epub 2023 Jul 4. PubMed
Cre-Lox miRNA-delivery technology optimized for inducible microRNA and gene-silencing studies in zebrafish. Guo F, Tromp A, Wang H, Hall TE, Giacomotto J. Nucleic Acids Res. 2025 Jan 11;53(2):gkaf004. doi: 10.1093/nar/gkaf004. PubMed
Imaging cellular activity simultaneously across all organs of a vertebrate reveals body-wide circuits. Ruetten VMS, Zheng W, Siwanowicz I, Mensh BD, Eddison M, Hu A, Chi Y, Lemire AL, Guo C, Kadobianskyi M, Renz M, Lelek-Greskovic S, He Y, Close K, Ihrke G, Petkova MD, Cook M, Knecht CJ, Dev A, Petruncio A, Wan Y, Lichtman JW, Engert F, Fishman MC, Judkewitz B, Rubinov M, Keller PJ, Satou C, Yu G, Tillberg PW, Sahani M, Ahrens MB. bioRxiv [Preprint]. 2025 Sep 20:2025.08.20.670374. doi: 10.1101/2025.08.20.670374. PubMed
Origin of Ewing sarcoma by embryonic reprogramming of neural crest to mesoderm. Vasileva E, Arata C, Luo Y, Burgos R, Crump JG, Amatruda JF. Cell Rep. 2025 Oct 28;44(10):116376. doi: 10.1016/j.celrep.2025.116376. Epub 2025 Oct 9. PubMed

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