pETcon(-) Citations (22)

Originally described in: pETCON Yeast Surface Display Plasmids
Unpublished

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Articles Citing pETcon(-)

Articles
Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity. Lambert AR, Hallinan JP, Shen BW, Chik JK, Bolduc JM, Kulshina N, Robins LI, Kaiser BK, Jarjour J, Havens K, Scharenberg AM, Stoddard BL. Structure. 2016 Jun 7;24(6):862-73. doi: 10.1016/j.str.2016.03.024. Epub 2016 Apr 28. PubMed
Characterization of homing endonuclease binding and cleavage specificities using yeast surface display SELEX (YSD-SELEX). Jacoby K, Lambert AR, Scharenberg AM. Nucleic Acids Res. 2016 Sep 28. pii: gkw864. PubMed
Plasmid-based one-pot saturation mutagenesis. Wrenbeck EE, Klesmith JR, Stapleton JA, Adeniran A, Tyo KE, Whitehead TA. Nat Methods. 2016 Nov;13(11):928-930. doi: 10.1038/nmeth.4029. Epub 2016 Oct 10. PubMed Associated Plasmids pEDA5_GFPmut3_Y66H
Deep sequencing methods for protein engineering and design. Wrenbeck EE, Faber MS, Whitehead TA. Curr Opin Struct Biol. 2017 Aug;45:36-44. doi: 10.1016/j.sbi.2016.11.001. Epub 2016 Nov 22. PubMed
Functional expression, production, and biochemical characterization of a laccase using yeast surface display technology. Bertrand B, Trejo-Hernandez MR, Morales-Guzman D, Caspeta L, Suarez Rodriguez R, Martinez-Morales F. Fungal Biol. 2016 Dec;120(12):1609-1622. doi: 10.1016/j.funbio.2016.08.009. Epub 2016 Sep 3. PubMed
Characterization of homing endonuclease binding and cleavage specificities using yeast surface display SELEX (YSD-SELEX). Jacoby K, Lambert AR, Scharenberg AM. Nucleic Acids Res. 2017 Feb 17;45(3):e11. doi: 10.1093/nar/gkw864. PubMed
Crystallographic analyses illustrate significant plasticity and efficient recoding of meganuclease target specificity. Werther R, Hallinan JP, Lambert AR, Havens K, Pogson M, Jarjour J, Galizi R, Windbichler N, Crisanti A, Nolan T, Stoddard BL. Nucleic Acids Res. 2017 Jun 20. doi: 10.1093/nar/gkx544. PubMed
Tuning DNA binding affinity and cleavage specificity of an engineered gene-targeting nuclease via surface display, flow cytometry and cellular analyses. Niyonzima N, Lambert AR, Werther R, De Silva Feelixge H, Roychoudhury P, Greninger AL, Stone D, Stoddard BL, Jerome KR. Protein Eng Des Sel. 2017 Jul 1;30(7):503-522. doi: 10.1093/protein/gzx037. PubMed
Characterizing Protein-Protein Interactions Using Deep Sequencing Coupled to Yeast Surface Display. Medina-Cucurella AV, Whitehead TA. Methods Mol Biol. 2018;1764:101-121. doi: 10.1007/978-1-4939-7759-8_7. PubMed
Optimization of Protein Thermostability and Exploitation of Recognition Behavior to Engineer Altered Protein-DNA Recognition. Lambert AR, Hallinan JP, Werther R, Glow D, Stoddard BL. Structure. 2020 Jul 7;28(7):760-775.e8. doi: 10.1016/j.str.2020.04.009. Epub 2020 Apr 30. PubMed
HIV-1 VRC01 Germline-Targeting Immunogens Select Distinct Epitope-Specific B Cell Receptors. Lin YR, Parks KR, Weidle C, Naidu AS, Khechaduri A, Riker AO, Takushi B, Chun JH, Borst AJ, Veesler D, Stuart A, Agrawal P, Gray M, Pancera M, Huang PS, Stamatatos L. Immunity. 2020 Oct 13;53(4):840-851.e6. doi: 10.1016/j.immuni.2020.09.007. PubMed
Perturbing the energy landscape for improved packing during computational protein design. Maguire JB, Haddox HK, Strickland D, Halabiya SF, Coventry B, Griffin JR, Pulavarti SVSRK, Cummins M, Thieker DF, Klavins E, Szyperski T, DiMaio F, Baker D, Kuhlman B. Proteins. 2021 Apr;89(4):436-449. doi: 10.1002/prot.26030. Epub 2020 Dec 11. PubMed
Optimization of multi-site nicking mutagenesis for generation of large, user-defined combinatorial libraries. Kirby MB, Medina-Cucurella AV, Baumer ZT, Whitehead TA. Protein Eng Des Sel. 2021 Feb 15;34. pii: 6333812. doi: 10.1093/protein/gzab017. PubMed
The High Mutational Sensitivity of ccdA Antitoxin Is Linked to Codon Optimality. Chandra S, Gupta K, Khare S, Kohli P, Asok A, Mohan SV, Gowda H, Varadarajan R. Mol Biol Evol. 2022 Oct 7;39(10):msac187. doi: 10.1093/molbev/msac187. PubMed
Mutational scan inferred binding energetics and structure in intrinsically disordered protein CcdA. Chandra S, Manjunath K, Asok A, Varadarajan R. Protein Sci. 2023 Mar;32(3):e4580. doi: 10.1002/pro.4580. PubMed
Synergistic Screening of Peptide-Based Biotechnological Drug Candidates for Neurodegenerative Diseases Using Yeast Display and Phage Display. Ozcelik CE, Begli O, Hincer A, Ahan RE, Kesici MS, Oguz O, Kasirga TS, Ozcubukcu S, Seker UOS. ACS Chem Neurosci. 2023 Oct 4;14(19):3609-3621. doi: 10.1021/acschemneuro.3c00248. Epub 2023 Aug 28. PubMed Associated Plasmids pETcon-pGAL1-Aga2-α-Synuclein-c_myc pETcon-pGAL1-Aga2-Amyloid β42-c_myc pET22b-T7-6h-GST-α-Synuclein
Preclinical proof of principle for orally delivered Th17 antagonist miniproteins. Berger S, Seeger F, Yu TY, Aydin M, Yang H, Rosenblum D, Guenin-Mace L, Glassman C, Arguinchona L, Sniezek C, Blackstone A, Carter L, Ravichandran R, Ahlrichs M, Murphy M, Pultz IS, Kang A, Bera AK, Stewart L, Garcia KC, Naik S, Spangler JB, Beigel F, Siebeck M, Gropp R, Baker D. Cell. 2024 Aug 8;187(16):4305-4317.e18. doi: 10.1016/j.cell.2024.05.052. Epub 2024 Jun 26. PubMed
Complete combinatorial mutational enumeration of a protein functional site enables sequence-landscape mapping and identifies highly-mutated variants that retain activity. Colom MS, Vucinic J, Adolf-Bryfogle J, Bowman JW, Verel S, Moczygemba I, Schiex T, Simoncini D, Bahl CD. Protein Sci. 2024 Aug;33(8):e5109. doi: 10.1002/pro.5109. PubMed
Oxidation Performance of the Aga2-Laccase Fusion Produced by Yeast Surface Display. Arenas-Olivares DY, Morales-Guzman D, Teymennet-Ramirez KV, Alcalde M, Gutierrez MC, Martinez-Morales F, Trejo-Hernandez MR. Biotechnol Appl Biochem. 2025 May 4:e2768. doi: 10.1002/bab.2768. PubMed
Deep learning-guided design of dynamic proteins. Guo AB, Akpinaroglu D, Stephens CA, Grabe M, Smith CA, Kelly MJS, Kortemme T. Science. 2025 May 22;388(6749):eadr7094. doi: 10.1126/science.adr7094. Epub 2025 May 22. PubMed
Designed miniproteins potently inhibit and protect against MERS-CoV. Ragotte RJ, Tortorici MA, Catanzaro NJ, Addetia A, Coventry B, Froggatt HM, Lee J, Stewart C, Brown JT, Goreshnik I, Sims JN, Milles LF, Wicky BIM, Glogl M, Gerben S, Kang A, Bera AK, Sharkey W, Schafer A, Harkema JR, Baric RS, Baker D, Veesler D. Cell Rep. 2025 Jun 24;44(6):115760. doi: 10.1016/j.celrep.2025.115760. Epub 2025 May 31. PubMed
HOXC8 impacts lung tumorigenesis by preventing pyroptotic cell death through the suppression of caspase-1 expression. Padia R, Sun L, Liao YF, Calbay O, Chi C, Akter M, Wu L, Fu Z, Zhang DD, Huang S. Cell Death Dis. 2025 Jul 23;16(1):552. doi: 10.1038/s41419-025-07867-8. PubMed

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