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pRK793 Citations (68)

Originally described in: Tobacco etch virus protease: mechanism of autolysis and rational design of stable mutants with wild-type catalytic proficiency.
Kapust RB, Tozser J, Fox JD, Anderson DE, Cherry S, Copeland TD, Waugh DS Protein Eng. 2001 Dec . 14(12):993-1000.
PubMed Journal

Articles Citing pRK793

Human glucocorticoid-induced TNF receptor ligand regulates its signaling activity through multiple oligomerization states. Zhou Z, Song X, Berezov A, Zhang G, Li Y, Zhang H, Murali R, Li B, Greene MI. Proc Natl Acad Sci U S A. 2008 Apr 8;105(14):5465-70. doi: 10.1073/pnas.0711350105. Epub 2008 Mar 31. PubMed
Expression, purification and structural characterization of recombinant hepcidin, an antimicrobial peptide identified in Japanese flounder, Paralichthys olivaceus. Srinivasulu B, Syvitski R, Seo JK, Mattatall NR, Knickle LC, Douglas SE. Protein Expr Purif. 2008 Sep;61(1):36-44. doi: 10.1016/j.pep.2008.05.012. Epub 2008 May 29. PubMed
Atomic resolution structural characterization of recognition of histo-blood group antigens by Norwalk virus. Choi JM, Hutson AM, Estes MK, Prasad BV. Proc Natl Acad Sci U S A. 2008 Jul 8;105(27):9175-80. doi: 10.1073/pnas.0803275105. Epub 2008 Jul 2. PubMed
Purification of recombinant apolipoproteins A-I and A-IV and efficient affinity tag cleavage by tobacco etch virus protease. Tubb MR, Smith LE, Davidson WS. J Lipid Res. 2009 Jul;50(7):1497-504. doi: 10.1194/jlr.D900003-JLR200. Epub 2009 Mar 24. PubMed
Triazole-linked inhibitors of inosine monophosphate dehydrogenase from human and Mycobacterium tuberculosis. Chen L, Wilson DJ, Xu Y, Aldrich CC, Felczak K, Sham YY, Pankiewicz KW. J Med Chem. 2010 Jun 24;53(12):4768-78. doi: 10.1021/jm100424m. PubMed
Vibrational Stark effect spectroscopy at the interface of Ras and Rap1A bound to the Ras binding domain of RalGDS reveals an electrostatic mechanism for protein-protein interaction. Stafford AJ, Ensign DL, Webb LJ. J Phys Chem B. 2010 Nov 25;114(46):15331-44. doi: 10.1021/jp106974e. Epub 2010 Oct 22. PubMed
Purification and crystallization of RNase HIII from Staphylococcus aureus. Reiling SA, Homma K, Asojo OA. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Jan 1;67(Pt 1):79-82. doi: 10.1107/S1744309110045616. Epub 2010 Dec 22. PubMed
Electrostatic effects of mutations of Ras glutamine 61 measured using vibrational spectroscopy of a thiocyanate probe. Stafford AJ, Walker DM, Webb LJ. Biochemistry. 2012 Apr 3;51(13):2757-67. doi: 10.1021/bi201225p. Epub 2012 Mar 21. PubMed
Expression and purification of recombinant human tyrosine hydroxylase as a fusion protein in Escherichia coli. Higgins CA, Vermeer LM, Doorn JA, Roman DL. Protein Expr Purif. 2012 Aug;84(2):219-23. doi: 10.1016/j.pep.2012.05.007. Epub 2012 Jun 1. PubMed
Separase-dependent cleavage of pericentrin B is necessary and sufficient for centriole disengagement during mitosis. Lee K, Rhee K. Cell Cycle. 2012 Jul 1;11(13):2476-85. doi: 10.4161/cc.20878. Epub 2012 Jul 1. PubMed
Structure and properties of the C-terminal beta-helical domain of VgrG protein from Escherichia coli O157. Uchida K, Leiman PG, Arisaka F, Kanamaru S. J Biochem. 2014 Mar;155(3):173-82. doi: 10.1093/jb/mvt109. Epub 2013 Dec 3. PubMed
Recombinant production of the amino terminal cytoplasmic region of dengue virus non-structural protein 4A for structural studies. Hung YF, Valdau O, Schunke S, Stern O, Koenig BW, Willbold D, Hoffmann S. PLoS One. 2014 Jan 23;9(1):e86482. doi: 10.1371/journal.pone.0086482. eCollection 2014. PubMed
Synonymous rare arginine codons and tRNA abundance affect protein production and quality of TEV protease variant. Fang J, Zou L, Zhou X, Cheng B, Fan J. PLoS One. 2014 Nov 26;9(11):e112254. doi: 10.1371/journal.pone.0112254. eCollection 2014. PubMed
Structural and functional characterization of the acidic region from the RIZ tumor suppressor. Sun Y, Stine JM, Atwater DZ, Sharmin A, Ross JB, Briknarova K. Biochemistry. 2015 Feb 17;54(6):1390-400. doi: 10.1021/bi501398w. Epub 2015 Feb 2. PubMed
Arrestin-3-Dependent Activation of c-Jun N-Terminal Kinases (JNKs). Zhan X, Kook S, Kaoud TS, Dalby KN, Gurevich EV, Gurevich VV. Curr Protoc Pharmacol. 2015 Mar 2;68:2.12.1-26. doi: 10.1002/0471141755.ph0212s68. PubMed
Hydrogen bond donation to the heme distal ligand of Staphylococcus aureus IsdG tunes the electronic structure. Lockhart CL, Conger MA, Pittman DS, Liptak MD. J Biol Inorg Chem. 2015 Jul;20(5):757-70. doi: 10.1007/s00775-015-1263-5. Epub 2015 Apr 25. PubMed
Rapid large-scale purification of myofilament proteins using a cleavable His6-tag. Zhang M, Martin JL, Kumar M, Khairallah RJ, de Tombe PP. Am J Physiol Heart Circ Physiol. 2015 Nov;309(9):H1509-15. doi: 10.1152/ajpheart.00598.2015. Epub 2015 Sep 18. PubMed
Expression and purification of the alpha subunit of the epithelial sodium channel, ENaC. Reddy BG, Dai Q, McNicholas CM, Fuller CM, Kappes JC, DeLucas LJ. Protein Expr Purif. 2016 Jan;117:67-75. doi: 10.1016/j.pep.2015.09.014. Epub 2015 Sep 21. PubMed
Purification and Bicelle Crystallization for Structure Determination of the E. coli Outer Membrane Protein TamA. Gruss F, Hiller S, Maier T. Methods Mol Biol. 2015;1329:259-70. doi: 10.1007/978-1-4939-2871-2_20. PubMed
Expression, purification, crystallization and X-ray diffraction analysis of ChiL, a chitinase from Chitiniphilus shinanonensis. Ueda M, Shimosaka M, Arai R. Acta Crystallogr F Struct Biol Commun. 2015 Dec 1;71(Pt 12):1516-20. doi: 10.1107/S2053230X15022001. Epub 2015 Nov 27. PubMed
The conserved TPR-containing C-terminal domain of Pseudomonas aeruginosa FimV is required for its cAMP-dependent and independent functions. Buensuceso RN, Nguyen Y, Zhang K, Daniel-Ivad M, Sugiman-Marangos SN, Fleetwood AD, Zhulin IB, Junop MS, Howell PL, Burrows LL. J Bacteriol. 2016 Jun 13. pii: JB.00322-16. PubMed
Generation of Artificial N-end Rule Substrate Proteins In Vivo and In Vitro. Naumann C, Mot AC, Dissmeyer N. Methods Mol Biol. 2016;1450:55-83. doi: 10.1007/978-1-4939-3759-2_6. PubMed
A Nonsense Mutation in Mycobacterium marinum That Is Suppressible by a Novel Mechanism. Williams EA, Mba Medie F, Bosserman RE, Johnson BK, Reyna C, Ferrell MJ, Champion MM, Abramovitch RB, Champion PA. Infect Immun. 2017 Jan 26;85(2). pii: e00653-16. doi: 10.1128/IAI.00653-16. Print 2017 Feb. PubMed
T-REX on-demand redox targeting in live cells. Parvez S, Long MJ, Lin HY, Zhao Y, Haegele JA, Pham VN, Lee DK, Aye Y. Nat Protoc. 2016 Dec;11(12):2328-2356. doi: 10.1038/nprot.2016.114. Epub 2016 Oct 27. PubMed

Associated Plasmids

Simple and Efficient Production and Purification of Mouse Myelin Oligodendrocyte Glycoprotein for Experimental Autoimmune Encephalomyelitis Studies. Jain RW, Dang AK, Kerfoot SM. J Vis Exp. 2016 Oct 27;(116). doi: 10.3791/54727. PubMed
Mechanically Watching the ClpXP Proteolytic Machinery. Cordova JC, Olivares AO, Lang MJ. Methods Mol Biol. 2017;1486:317-341. PubMed
Catalytic Determinants of Alkene Production by the Cytochrome P450 Peroxygenase OleTJE. Matthews S, Belcher JD, Tee KL, Girvan HM, McLean KJ, Rigby SE, Levy CW, Leys D, Parker DA, Blankley RT, Munro AW. J Biol Chem. 2017 Jan 4. pii: jbc.M116.762336. doi: 10.1074/jbc.M116.762336. PubMed
Akt3 is a privileged first responder in isozyme-specific electrophile response. Long MJ, Parvez S, Zhao Y, Surya SL, Wang Y, Zhang S, Aye Y. Nat Chem Biol. 2017 Mar;13(3):333-338. doi: 10.1038/nchembio.2284. Epub 2017 Jan 23. PubMed
Production of alkenes and novel secondary products by P450 OleTJE using novel H2 O2 -generating fusion protein systems. Matthews S, Tee KL, Rattray NJ, McLean KJ, Leys D, Parker DA, Blankley RT, Munro AW. FEBS Lett. 2017 Mar;591(5):737-750. doi: 10.1002/1873-3468.12581. Epub 2017 Feb 21. PubMed
Biochemical and biophysical investigations of the interaction between human glucokinase and pro-apoptotic BAD. Rexford A, Zorio DA, Miller BG. PLoS One. 2017 Feb 9;12(2):e0171587. doi: 10.1371/journal.pone.0171587. eCollection 2017. PubMed
Engineering Botulinum Neurotoxin C1 as a Molecular Vehicle for Intra-Neuronal Drug Delivery. Vazquez-Cintron EJ, Beske PH, Tenezaca L, Tran BQ, Oyler JM, Glotfelty EJ, Angeles CA, Syngkon A, Mukherjee J, Kalb SR, Band PA, McNutt PM, Shoemaker CB, Ichtchenko K. Sci Rep. 2017 Feb 21;7:42923. doi: 10.1038/srep42923. PubMed
Real-time detection of N-end rule-mediated ubiquitination via fluorescently labeled substrate probes. Mot AC, Prell E, Klecker M, Naumann C, Faden F, Westermann B, Dissmeyer N. New Phytol. 2017 Mar 9. doi: 10.1111/nph.14497. PubMed

Associated Plasmids

His-Tag-Mediated Dimerization of Chemoreceptors Leads to Assembly of Functional Nanoarrays. Haglin ER, Yang W, Briegel A, Thompson LK. Biochemistry. 2017 Nov 7;56(44):5874-5885. doi: 10.1021/acs.biochem.7b00698. Epub 2017 Sep 22. PubMed
Crystal Structure of a Plant Multidrug and Toxic Compound Extrusion Family Protein. Tanaka Y, Iwaki S, Tsukazaki T. Structure. 2017 Sep 5;25(9):1455-1460.e2. doi: 10.1016/j.str.2017.07.009. PubMed
Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock. Shinohara Y, Koyama YM, Ukai-Tadenuma M, Hirokawa T, Kikuchi M, Yamada RG, Ukai H, Fujishima H, Umehara T, Tainaka K, Ueda HR. Mol Cell. 2017 Sep 7;67(5):783-798.e20. doi: 10.1016/j.molcel.2017.08.009. PubMed
Biochemical and structural characterization of a novel cooperative binding mode by Pit-1 with CATT repeats in the macrophage migration inhibitory factor promoter. Agarwal S, Cho TY. Nucleic Acids Res. 2018 Jan 25;46(2):929-941. doi: 10.1093/nar/gkx1183. PubMed
Further insights into the metal ion binding abilities and the metalation pathway of a plant metallothionein from Musa acuminata. Cabral ACS, Jakovleska J, Deb A, Penner-Hahn JE, Pecoraro VL, Freisinger E. J Biol Inorg Chem. 2018 Jan;23(1):91-107. doi: 10.1007/s00775-017-1513-9. Epub 2017 Dec 7. PubMed
Biotin-tagged proteins: Reagents for efficient ELISA-based serodiagnosis and phage display-based affinity selection. Verma V, Kaur C, Grover P, Gupta A, Chaudhary VK. PLoS One. 2018 Jan 23;13(1):e0191315. doi: 10.1371/journal.pone.0191315. eCollection 2018. PubMed
A Generic Self-Assembly Process in Microcompartments and Synthetic Protein Nanotubes. Uddin I, Frank S, Warren MJ, Pickersgill RW. Small. 2018 May;14(19):e1704020. doi: 10.1002/smll.201704020. Epub 2018 Mar 24. PubMed
Cryo-EM reveals the structural basis of microtubule depolymerization by kinesin-13s. Benoit MPMH, Asenjo AB, Sosa H. Nat Commun. 2018 Apr 25;9(1):1662. doi: 10.1038/s41467-018-04044-8. PubMed
Leishmania phosphatase PP5 is a regulator of HSP83 phosphorylation and essential for parasite pathogenicity. Norris-Mullins B, Krivda JS, Smith KL, Ferrell MJ, Morales MA. Parasitol Res. 2018 Sep;117(9):2971-2985. doi: 10.1007/s00436-018-5994-4. Epub 2018 Jul 8. PubMed
Structural Basis for MARK1 Kinase Autoinhibition by Its KA1 Domain. Emptage RP, Lemmon MA, Ferguson KM, Marmorstein R. Structure. 2018 Aug 7;26(8):1137-1143.e3. doi: 10.1016/j.str.2018.05.008. Epub 2018 Jun 28. PubMed
Structural and catalytic properties of the peroxygenase P450 enzyme CYP152K6 from Bacillus methanolicus. Girvan HM, Poddar H, McLean KJ, Nelson DR, Hollywood KA, Levy CW, Leys D, Munro AW. J Inorg Biochem. 2018 Nov;188:18-28. doi: 10.1016/j.jinorgbio.2018.08.002. Epub 2018 Aug 3. PubMed
A histidine-rich Pseudomonas metallothionein with a disordered tail displays higher binding capacity for cadmium than zinc. Habjanic J, Zerbe O, Freisinger E. Metallomics. 2018 Oct 17;10(10):1415-1429. doi: 10.1039/c8mt00193f. PubMed
Redox control and autoxidation of class 1, 2 and 3 phytoglobins from Arabidopsis thaliana. Mot AC, Puscas C, Miclea P, Naumova-Letia G, Dorneanu S, Podar D, Dissmeyer N, Silaghi-Dumitrescu R. Sci Rep. 2018 Sep 12;8(1):13714. doi: 10.1038/s41598-018-31922-4. PubMed
Bismaleimide cross-linked anthrax toxin forms functional octamers with high specificity in tumor targeting. Fischer ES, Campbell WA 4th, Liu S, Ghirlando R, Fattah RJ, Bugge TH, Leppla SH. Protein Sci. 2019 Jun;28(6):1059-1070. doi: 10.1002/pro.3613. Epub 2019 Apr 17. PubMed
Production of Farnesylated and Methylated Proteins in an Engineered Insect Cell System. Gillette W, Frank P, Perkins S, Drew M, Grose C, Esposito D. Methods Mol Biol. 2019;2009:259-277. doi: 10.1007/978-1-4939-9532-5_20. PubMed
Impact of naturally occurring serine/cysteine variations on the structure and function of Pseudomonas metallothioneins. Habjanic J, Chesnov S, Zerbe O, Freisinger E. Metallomics. 2020 Jan 29;12(1):23-33. doi: 10.1039/c9mt00213h. PubMed
Covalent and non-covalent strategies for the immobilization of Tobacco Etch Virus protease (TEVp) on superparamagnetic nanoparticles. Norris JL, Patel T, Dasari AKR, Cope TA, Lim KH, Hughes RM. J Biotechnol. 2020 Oct 10;322:1-9. doi: 10.1016/j.jbiotec.2020.06.021. Epub 2020 Jun 30. PubMed
Metallation pathway of a plant metallothionein: Cicer arietinum MT2. Salim A, Chesnov S, Freisinger E. J Inorg Biochem. 2020 Sep;210:111157. doi: 10.1016/j.jinorgbio.2020.111157. Epub 2020 Jun 24. PubMed
Purification of Affinity Tag-free Recombinant Tubulin from Insect Cells. Ti SC, Wieczorek M, Kapoor TM. STAR Protoc. 2020 Jun 19;1(1). doi: 10.1016/j.xpro.2019.100011. Epub 2020 Jun 3. PubMed
Enhancement of trans-cleavage activity of Cas12a with engineered crRNA enables amplified nucleic acid detection. Nguyen LT, Smith BM, Jain PK. Nat Commun. 2020 Sep 30;11(1):4906. doi: 10.1038/s41467-020-18615-1. PubMed
Expression of in vivo biotinylated recombinant antigens SAG1 and SAG2A from Toxoplasma gondii for improved seroepidemiological bead-based multiplex assays. Klein S, Stern D, Seeber F. BMC Biotechnol. 2020 Oct 6;20(1):53. doi: 10.1186/s12896-020-00646-7. PubMed
Protocol for Biochemical Analysis and Structure Determination of the ZZ Domain of the E3 Ubiquitin Ligase HERC2. Liu J, Xue Z, Vann KR, Shi X, Kutateladze TG. STAR Protoc. 2020 Oct 28;1(3):100155. doi: 10.1016/j.xpro.2020.100155. eCollection 2020 Dec 18. PubMed
Expression and purification of a cleavable recombinant fortilin from Escherichia coli for structure activity studies. Cantrell MS, Wall JD, Pu X, Turner M, Woodbury L, Fujise K, McDougal OM, Warner LR. Protein Expr Purif. 2022 Jan;189:105989. doi: 10.1016/j.pep.2021.105989. Epub 2021 Oct 6. PubMed
The TFAMoplex-Conversion of the Mitochondrial Transcription Factor A into a DNA Transfection Agent. Burger M, Kaelin S, Leroux JC. Adv Sci (Weinh). 2022 Mar;9(8):e2104987. doi: 10.1002/advs.202104987. Epub 2022 Jan 17. PubMed
Compartmentalization of telomeres through DNA-scaffolded phase separation. Jack A, Kim Y, Strom AR, Lee DSW, Williams B, Schaub JM, Kellogg EH, Finkelstein IJ, Ferro LS, Yildiz A, Brangwynne CP. Dev Cell. 2022 Jan 24;57(2):277-290.e9. doi: 10.1016/j.devcel.2021.12.017. PubMed

Associated Plasmids

Function-guided proximity mapping unveils electrophilic-metabolite sensing by proteins not present in their canonical locales. Zhao Y, Miranda Herrera PA, Chang D, Hamelin R, Long MJC, Aye Y. Proc Natl Acad Sci U S A. 2022 Feb 1;119(5). pii: 2120687119. doi: 10.1073/pnas.2120687119. PubMed
Poxviruses and paramyxoviruses use a conserved mechanism of STAT1 antagonism to inhibit interferon signaling. Talbot-Cooper C, Pantelejevs T, Shannon JP, Cherry CR, Au MT, Hyvonen M, Hickman HD, Smith GL. Cell Host Microbe. 2022 Mar 9;30(3):357-372.e11. doi: 10.1016/j.chom.2022.01.014. Epub 2022 Feb 18. PubMed
Divergent binding mode for a protozoan BRC repeat to RAD51. Pantelejevs T, Hyvonen M. Biochem J. 2022 May 27;479(10):1031-1043. doi: 10.1042/BCJ20220141. PubMed
Effects of Alexander disease-associated mutations on the assembly and organization of GFAP intermediate filaments. Yang AW, Lin NH, Yeh TH, Snider N, Perng MD. Mol Biol Cell. 2022 Jul 1;33(8):ar69. doi: 10.1091/mbc.E22-01-0013. Epub 2022 May 5. PubMed
Functional expression of diverse post-translational peptide-modifying enzymes in Escherichia coli under uniform expression and purification conditions. Glassey E, King AM, Anderson DA, Zhang Z, Voigt CA. PLoS One. 2022 Sep 19;17(9):e0266488. doi: 10.1371/journal.pone.0266488. eCollection 2022. PubMed
Fluorescence dequenching assay for the activity of TEV protease. Paththamperuma C, Page RC. Anal Biochem. 2022 Dec 15;659:114954. doi: 10.1016/j.ab.2022.114954. Epub 2022 Oct 18. PubMed
Shelterin reduces the accessibility of telomeric overhangs. Shiekh S, Jack A, Saurabh A, Mustafa G, Kodikara SG, Gyawali P, Hoque ME, Presse S, Yildiz A, Balci H. Nucleic Acids Res. 2022 Dec 9;50(22):12885-12895. doi: 10.1093/nar/gkac1176. PubMed
Programmable RNA detection with CRISPR-Cas12a. Jain P, Rananaware S, Vesco E, Shoemaker G, Anekar S, Sandoval LS, Meister K, Macaluso N, Nguyen L. Res Sq. 2023 Feb doi: 10.21203/ Preprint. PubMed
TRAK adaptors regulate the recruitment and activation of dynein and kinesin in mitochondrial transport. Canty JT, Hensley A, Aslan M, Jack A, Yildiz A. Nat Commun. 2023 Mar 13;14(1):1376. doi: 10.1038/s41467-023-36945-8. PubMed
Crotamine-based recombinant immunotoxin targeting HER2 for enhanced cancer cell specificity and cytotoxicity. Jang J, Nguyen MQ, Park S, Ryu D, Park H, Lee G, Kim CJ, Jang YJ, Choe H. Toxicon. 2023 Jul;230:107157. doi: 10.1016/j.toxicon.2023.107157. Epub 2023 May 15. PubMed
Expression and purification of Drosophila OBP44a with the aids of LC-MS and NMR. He Y, Cotten ML, Yin J, Yuan Q, Tjandra N. Protein Expr Purif. 2023 Dec;212:106354. doi: 10.1016/j.pep.2023.106354. Epub 2023 Aug 18. PubMed

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