We narrowed to 661 results for: SIM;
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TypeBlog Post...cutting most anywhere within the RNA will do. Similarly, if you want to knock out a gene, a frameshift...enzymes The solution to the PAM problem seems simple, in theory: find a Cas enzyme or evolve one that...
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CRISPR in the Clinic
TypeBlog Post...therapy currently in clinical trials is somewhat similar (Hussein et al). It employs Cas9 to cut at two ...therapy, since TTR is primarily made in the liver. Similarly, for cardiovascular disease approaches targeting... -
Early Career Researcher Toolbox: Finding Relevant Papers
TypeBlog Post...published, similar to Facebook or Instagram. Key features Setting up a personalized feed is simple. You can... -
Quickest Way to Deposit Plasmids: The Deposit Spreadsheet
TypeBlog Post...plasmid deposit process can be broken down into four simple steps: Send plasmid information to Addgene Material...the Deposit Spreadsheet is the quickest option. Simply download the spreadsheet and copy and paste your... -
Cpf1 Update: Comparison to Cas9 and NgAgo
TypeBlog Post...CRISPR systems based on Cas9 were thought to be the simplest CRISPR systems and the easiest to adapt to genome...et al. suggest that AsCpf1’s off-target rate is similar to that of high fidelity Cas9s eSpCas9 and SpCas9... -
Experimenting in an Open Source lab: from CRISPR to Cats
TypeBlog Post...OpenWorm project. The main goal of OpenWorm is to simulate C. elegans as a computer model. When I first heard...genome. While C. elegans are often thought of as simple organisms , they have many levels of complexity... -
Tips for a 1st time AAV user (by a Rookie AAV user)
TypeBlog Post...transfer plasmid. The good news is there’s a few simple ways to deal with this issue. One way is to grow...cultures with intact ITRs. I use a spreadsheet similar to this one to plan my AAV packaging PEI transfections... -
Plasmids 101: Protein Expression
TypeBlog Post...insect cells require demanding culture conditions similar to mammalian expression systems. Bacterial expression...expression. Protein expression in bacteria is quite simple; DNA coding for your protein of interest is inserted... -
Adenoviral Delivery of CRISPR/Cas9 Aims to Expand Genome Editing to Primary Cells
TypeBlog Post...non-transformed cells yielded rates of targeted mutagenesis similar to those achieved by isogenic AdVs encoding TALENs...a potential platform that could be realized via simple switching of the relevant gRNAs and donor DNA Adenoviral... -
Magnetic Control of Proteins: More than a Dream
TypeBlog Post...see if any other fluorescent proteins display a similar effect (many do). Fusing EGFP to the self-labeling... tools, they’re optimistic that MagLOV can be similarly adaptable into future magnetogenetic tools. Embracing... -
Viral Vectors 101: Producing Your rAAV
TypeBlog Post... helper viruses like adenovirus (Ad) or herpes simplex virus to facilitate efficient replication. The ...purify your rAAV from your supernatant, you can simply use polyethylene glycol (PEG). We add 25 mL of ... -
Fluorescent Tagging of Endogenous Genes with SapTrap
TypeBlog Post...vectors can be used to tag endogenous genes and simultaneously introduce a selection marker for screening ... CRISPR/Cas Plasmids - Protein Tagging. Beyond simply monitoring protein localization and activity, CRISPR... -
Quick Guide to Working with Drosophila Part 1: Getting Started with Flies
TypeBlog Post...Compared to humans and mice, flies have a relatively simple genome. They have four chromosomes: the X (and ... phenotypes, check out the Classical Genetics Simulator website. One interesting thing to know is that... -
PhD Applications After COVID
TypeBlog Post... tends to go something like this: However, as simply as it seems laid out above, there are many places...potential programs and universities stressful or simply not feasible. Through the virtual systems created... -
Common Injection Routes in Mice
TypeBlog Post...administered through the tail vein — many researchers will simply refer to these as “tail vein injections.” However...Intranasal instillation Intranasal instillation is very similar to its intratracheal counterpart, as both procedures... -
Polymerase Chain Reaction Overview and Applications
TypeBlog Post...End point PCR, which is commonly referred to as simply PCR, is used for an array of different molecular... or pathogen identification. Scientists can simultaneously detect several different pathogens in one specimen... -
Hot Plasmids and Viral Preps - May 2021
TypeBlog Post...jbc.RA120.01289 Novel protein cage provides simple enzyme protection in yeast bioproduction pathways... a reaction pathway, the MPyV system provides a simple, efficient method for protecting a single enzyme... -
Viral Vectors 101: Voltage Indicators
TypeBlog Post... change across the membrane of cardiac cells. Similarly, neuronal signaling is carried out by action potentials...detailed below. Voltage Sensitive Domain (VSD) GEVIs Simply put, VSD-based sensors consist of a VSD fused to... -
Chromoproteins: Colorful Proteins For Molecular Biology Experiments
TypeBlog Post...after transforming them into your cells, you can simply look for blue colonies to determine which cells...cost yet. However, many fluorescent proteins face similar limitations, and many labs are already using these... -
PITChing MMEJ as an Alternative Route for Gene Editing
TypeBlog Post...figure below). The double-MMEJ strategy looks very similar to HDR, but it is accomplished using much smaller... of MMEJ. This double MMEJ strategy looks very similar to HDR, but it is completed using much shorter ...