We narrowed to 618 results for: Set
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TypeBlog Post...convex scaffold and are randomized with a defined set of different trinucleotides (corresponding to different...
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A Guide to Starting Your Own Journal Club
TypeBlog Post... notice for the first meeting so that people can set aside time in their schedules and read the paper ...). This notice can be shortened as the meeting settles in and people get the time recurrently carved out... -
Chromoproteins: Colorful Proteins For Molecular Biology Experiments
TypeBlog Post...chromoproteins are actually a subset of the fluorescent protein family. What sets them apart is the way they... -
10 Basic tips for mammalian cell culture
TypeBlog Post... you identify bacterial and yeast contaminants. Set up a routine to split cells Don’t be lazy about splitting... -
AAV Vector Quality Control: Going the Extra Mile with NGS
TypeBlog Post...a large number of hits to one sequence/gene - we set our threshold at >100 hits - immediately raises a... -
Cloning Mammalian Cells with the Agarose Method
TypeBlog Post...containing serum in each well. A 200 ul pipettor is set to 200 ul, wiped down with 70% ethanol, and a box... -
The Scientific Conference Poster Session: Tips for Success
TypeBlog Post...list of posters of interest, then you’ve already set yourself up for success. But sometimes, attendees... -
Addgene's Cancer Collection Pages Connect the Research Community
TypeBlog Post...Pathway Clone Collection 2.0. The collection is a set of vectors for use with the Gateway Cloning Platform... -
Google Forums Round Up: First Impressions of NgAgo
TypeBlog Post...there include: Google Groups - I've specifically set up a forum where NgAgo users can share protocols ... -
PITChing MMEJ as an Alternative Route for Gene Editing
TypeBlog Post...allow for two sets of microhomologies (5’ and 3’) to anneal, knocking the GFP-Puro cassette into the locus...protocol for MMEJ-mediated knock-in of a GFP-Puro cassette into a given locus, just upstream of a stop codon...microhomology to the insertion locus flanking the GFP-Puro cassette. Three double stranded breaks are necessary for...for knock-in: one on either side of the GFP-Puro cassette and one in between the 5’ and 3’ microhomologies...of PITCh. The PITCh plasmid contains a GFP-Puro cassette flanked by 5' and 3' microhomology and PITCh-gRNA...creates two DSBs in the PITCh plasmid to release the cassette, and an insertion-locus-specific gRNA cleaves ...and 3’ microhomologies are added to the GFP-Puro cassette via PCR, and this construct is inserted into the... -
Which Fluorescent Protein Should I Use?
TypeBlog Post... brightness is compared to that of EGFP which is set as 1. Some proteins are very dim (e.g. TagRFP657,... -
Weighing Reagents Protocol
TypeProtocol...measurement. Hit the tare button (or zero button) to set the balance to zero. Pro-Tip If you’re weighing a... -
Degrading DNA with Cascade-Cas3
TypeBlog Post...nature, they are largely underutilized in research settings — mostly a consequence of Cascade's complexity... -
Production of Virus in Insect Versus Mammalian Cells
TypeBlog Post... for saving time and avoiding potentially costly set-ups. However, there are many cases where the specific... -
Antibodies 101: The Four ELISAs and When to Use Them
TypeBlog Post...antigen or an antibody depending on how the assay is set up. Then they block the capture reagent to prevent...binding to a primary antibody. While the precise setup of the method can vary, typically users first coat... -
PRIDICT: Predicting Efficiencies of Prime Editing Guide RNAs
TypeBlog Post...facilitates the use of prime editing in pooled settings with hundreds to thousands of pegRNAs. Chromatin-based...primer binding site, and many more. Once we had our datasets with all the different features and editing efficiencies...PRIDICT2.0 (Mathis et al., 2024). The additional datasets used in the training of PRIDICT2.0 make this model... -
Hot Plasmids - November 2023
TypeBlog Post...This modular approach combines an interchangeable set of fusogenic and targeting components to reprogram...Every few months, we highlight a subset of the new plasmids, antibodies, and viral preps in the repository... -
Viral Vectors 101: The Retroviral Lifecycle
TypeBlog Post...it’s simple. The RT protein is made by a separate set of instructions in the same producer cells as the... -
Course-Based Undergraduate Research Experiences (CUREs)
TypeBlog Post...and/or perceived professional risk involved in setting up a CURE, especially if it’s a new approach within... amenable to in-class labs. Provost ultimately settled on a two-semester model, in which students learn... -
Bioinformatics at Addgene
TypeBlog Post...working on one process at a time, and testing a small set of data each time a new process was added, we progressively...easily shared with others without any complicated setup. We created, tested, and debugged each of our pipeline...