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We narrowed to 407 results for: abo.4

Showing: 381 - 400 of 407 results
  1. CRISPR Library Amplification

    Type
    Protocol
    ...2: Harvest cells and purify DNA (Estimated time 3-4 hours) Cells should be harvested first thing in the... Reagents 200 µL electrocompetent cells (Default: 4 tubes of Endura Duos, Lucigen, 60242-1) Alternatives...Agar + Antibiotic 65 mm Petri dish (VWR, 11019-552) 4 MaxiPreps (Qiagen HiSpeed Max, Catalog #12663) Tips...plates. Prechill Micropulser cuvettes on ice. Thaw 4 tubes of electrocompetent cells on ice for 15-20 minutes... incubation if needed. Place 100 mL sterile LB at 4 ℃. Day 2 (morning) Before beginning, prechill at least... LB-bacteria per plate. Centrifuge tubes (4000 G, 4 ℃, 15 minutes) to pellet bacteria. Decant LB and weigh...require modifications dictated by the originating laboratory for optimal results. If you obtained the pooled...
  2. Protocol - Over-Agar Antibiotic Plating

    Type
    Protocol
    ...Prepare carbenicillin to a concentration of 1 mg/mL – 4 mg/mL in LB medium. The concentration of antibiotic... 1 mg/mL plate and effective selection. 150 µL of 4 mg/mL Carbenicillin plated over-agar Plate shows several...coli after Over-Agar Plating of Carbenicillin. The above graph displays the stock concentration of Carbenicillin...concentrations that will work for this assay, and the above result represents a single experiment. For publishable...
  3. 15 Hot Plasmids from 2017

    Type
    Blog Post
    ...through the expression of transcription factors OCT3/4, SOX2, KLF4, and c-MYC is the established model for...but be sure to let us know if you'd like to write about your plasmids in a future blog post. No time to ...repository. These variants can be used as tools to learn about the influence of structure on an FP’s properties...100bp or 1kb fragments are produced (see figure above). 3 Reasons The PSU Ladders Are Awesome Tools: ...
  4. Virus Protocol - Generating Stable Cell Lines

    Type
    Protocol
    ...Reagent Preparation DMEM Complete: 10% v/v FBS and 4 mM L-alanyl-L-glutamine (or stable alternative, such...heat-inactivated FBS and 5mL of 100X glutaGRO. Store at 4 °C. Pro-Tip Different brands and FBS lots can promote...Shalem O, Zhang F. Nature Methods. 2014 Aug;11(8):783-4 (Link opens in a new window) . Last reviewed on: September...cells in the untransduced well (0 µL lentivirus, above) are dying. Perform regular media changes and monitor...
  5. Chemogenetics Guide

    Type
    Guide
    ...FFz, CFz). Learn more about optogenetic systems in our Optogenetics Guide . Figure 4: Luminopsins can be...L131G, Q139L, and Y217F and is termed PSAM4 (or PSAM 4 ). Additional varenicline analogs, termed ultrapotent...been developed and are commercially available. Table 4: Common promoters in chemogenetics plasmids Promoter...controlled with cell-type specific promoters. Table 4 lists some common promoters found in chemogenetic ...mimicking clozapine's actions? Psychopharmacology, 178 (4), 451–460. https://doi.org/10.1007/s00213-004-2017...designer G protein-coupled receptor. Mol Pharmacol, 82 (4), 575–582. https://doi.org/10.1124/mol.112.080358 ... (2016). DREADDs for Neuroscientists. Neuron, 89 (4), 683–694. https://doi.org/10.1016/j.neuron.2016.01.040...
  6. Protocol - How to Inoculate a Bacterial Culture

    Type
    Protocol
    ...out the following into a 500 mL glass bottle: 4 g NaCl 4 g Tryptone 2 g Yeast Extract and dH 2 O to 400...suggested amount, instead of the other dry ingredients above. Loosely close the cap on the bottle (do NOT close...
  7. Protocol - How to Run an Agarose Gel

    Type
    Protocol
    ...gel with a pipette tip. Place newly poured gel at 4 °C for 10-15 mins OR let sit at room temperature for...will set more quickly if you place the gel tray at 4 °C earlier so that it is already cold when the gel...cool down to about 50 °C (about when you can comfortably keep your hand on the flask), about 5 mins. Optional...concentration of approximately 0.2-0.5 μg/mL (usually about 2-3 μl of lab stock solution per 100 mL gel). EtBr... of the tip of the pipette into the buffer just above the well. Very slowly and steadily, push the sample... of the way down the gel. A typical run time is about 1-1.5 hours, depending on the gel concentration ...
  8. AAV ddPCR Titration

    Type
    Protocol
    ...): 5 µL in 95 µL 1X PCR buffer (1:8,000) Dilution 4 (20X): 5 µL in 95 µL 1X PCR buffer (1:160,000) Dilution...Extension 60 1 2 50 Signal Stabilization 98 10 2 1 Hold 4 ∞ 2 1 After PCR is complete, transfer the plate to...factor of virus V = Volume of virus in reaction mix (4 µL) Sample Data When analyzing data there should be...dilution BSC. Prepare 1X dilution buffer (see recipe above). Save ~25 µL of 1X dilution buffer in a microcentrifuge...
  9. Antibody Guide

    Type
    Guide
    ...small multiplex experiments 4-color flow panel: BV421, FITC, PE, and APC 4-color microscopy panel: DAPI...protects mucosal membranes Dimer with a valency of 4 IgA1; IgA2 IgD Coexpressed with IgM on the surface... As a guideline, most antibodies can be stored at 4 °C for short-term storage. For long-term storage they...conjugated to fluorophores should never be stored below 4 °C. Certain isotype subclasses, such as IgG3, aggregate...aggregate after thawing and therefore should be kept at 4 °C. Record and track lot numbers for all antibodies...typically use HRP as a signaling molecule. Figure 4: A direct sandwich ELISA, which uses a capture antibody...are often used in clinical applications. Diabodies - Diabodies contain two Fab fragments, each recognizing...
  10. Adeno-associated virus (AAV) Guide

    Type
    Guide
    ...: a quantitative comparison . Molecular Therapy, 4 (4), 383–391. https://doi.org/10.1006/mthe.2001.0456...packaging capacity of rAAV vectors to ~2.4 kb. Figure 4: Examples of AAV serotypes, pseudotypes, hybrid capsids... . Current Opinion in Molecular Therapeutics, 11 (4), 442–447. PMID: 19649989 (Link opens in a new window...for human gene therapy . Current Gene Therapy, 3 (4), 281–304. https://doi.org/10.2174/1566523034578285...AAV) as a vector for gene therapy . BioDrugs, 31 (4), 317–334. https://doi.org/10.1007/s40259-017-0234...our adeno-associated viral vector guide to learn about AAV vector components, production and common uses...E2a and VA for replication. For more information about adenovirus, read our Adenoviral Vector Guide . Recombinant...
  11. CRISPR Guide

    Type
    Guide
    ...double-strand break (DSB) within the target DNA, located ∼3–4 nucleotides upstream of the PAM sequence. The resulting... , or others, can increase HDR efficiency. Figure 4: Overview of HDR. In most applications, a large portion... for In Vivo Genome Editing. Molecular Cell , 73 (4), 714-726.e4. PMID: 30581144 Fu, Y., Foden, J. A.,...engineered CjCas9 orthologs. Molecular Therapy , 31 (4), 1177–1187. PMID: 36733251 Harrington, L. B., Doxzen...all-in-one CRISPR/Cas9 vector system. Scientific Reports , 4 (1). PMID: 24954249 Shechner, D. M., Hacisuleyman,...CRISPR/CAS-Mediated Genome Engineering. Cell , 153 (4), 910–918. PMID: 23643243 Zhang, Y., & Marchisio, ...cytidine deaminase fusions. Nature Biotechnology . 35 (4), 371–376. PMID: 28191901 Komor, A. C., Kim, Y. B....
  12. Protocol - How to Perform Sequence Analysis

    Type
    Protocol
    ...used to denote that the position could be any of the 4 bases. Check the trace file and see if you can manually...Addgene lists the primers used to obtain each result above the posted sequence in the "View Sequence" link....sequence than expected and wish to contact Addgene about the accuracy of your plasmid, please email help@...
  13. Lentiviral Vector Guide

    Type
    Guide
    ...as well. Third-generation plasmids include (Figure 4): Transfer plasmid — contains transgene and LTRs (...third-generation systems, please refer to Table 1. Figure 4: Third-generation lentiviral plasmids. Created with...Vectors through Pseudotyping. Current Gene Therapy , 5 (4), 387–398. https://doi.org/10.2174/1566523054546224...gene silencing by RNAi in primary cells. RNA , 9 (4), 493–501. https://doi.org/10.1261/rna.2192803 PMID..., 21 (1). https://doi.org/10.1186/s12864-020-6647-4 PMID: 32151239 Zufferey, R., Dull, T., Mandel, R. ...Read our lentiviral guide to learn about lentiviral components, generations, lentiviral production, and...lentiviral vectors that can be safely used in laboratory settings. These engineered lentiviral vectors...
  14. Water Bath Protocol

    Type
    Protocol
    ...walk-in refrigerators to achieve a temperature between 4°C and room temperature. This general protocol suits... lab! Introduction A water bath is a piece of laboratory equipment that helps bring your materials to ...even if you are using disinfectants as described above in step 3. You will also need to maintain the appropriate...
  15. Modular Cloning Guide

    Type
    Guide
    ...recognition site, leaving DNA fragments with an overhang of 4 bp. If each DNA module is flanked with a standard ...digested and ligated in a single step resulting in a 4-bp fusion site in between. MoClo can be used for a...tag-compatible RBSs, 2 secretion tags, 6 CDSs, 9 terminators, 4 nonfunctional "dummy" parts, 34 backbones, and 6 destination...Learn about modular cloning (MoClo) and find MoClo kits deposited with Addgene, including the MoClo Toolkit...building synthetic genetic circuits, engineering metabolic pathways, assembling gene-editing tools, and more...editing, functional genomics, and more complex metabolic engineering and synthetic biology, compatible ... Techniques by Nicola Patron at The Sainsbury Laboratory Weber E, Engler C, Gruetzner R, Werner S, Marillonnet...
  16. Promoters

    Type
    Guide
    ...proximal promoter, and the distal promoter (Figure 4). Figure 4: Basic eukaryotic promoter structure. TF = transcription...Learn about bacterial and eukaryotic promoters, including transcription and the transcription complex...your gene of interest is expressed. Promoters are about 100–1,000 base pairs long and are adjacent and typically...Inducible by arabinose Promoter of the arabinose metabolic operon trp Repressible by tryptophan Promoter ...
  17. Molecular Biology Protocol - Restriction Digest of Plasmid DNA

    Type
    Protocol
    ...cloning, it is recommended that you digest for at least 4 hours. If you will be using the digested DNA for another...more at (Link opens in a new window) NEB's website about star activity . If you are digesting a large number...
  18. Adenovirus Guide

    Type
    Guide
    ...genome or using other plasmids instead of HVs. Figure 4: Third-generation rAdV vectors and helper virus. Created...circumvention strategies . Current Gene Therapy, 11 (4), 307–320. https://doi.org/10.2174/156652311796150372... era of personalized medicine . Genes & Diseases, 4 (2), 43–63. https://doi.org/10.1016/j.gendis.2017.04.001...Read our adenoviral vector guide to learn about adenoviral vector components, production and common uses...E2a and VA for replication. For more information about AAVs, read our AAV guide . Recombinant Adenoviral...linearized construct, and rAdV vectors can be harvested about 7–10 days later. Vogelstein designed multiple shuttle...
  19. Plasmid Cloning by Restriction Enzyme Digest (with Protocols)

    Type
    Protocol
    ...therefore it is important that the digest go at least 4 hours and as long as overnight. If you are going to...Information about plasmid cloning by restriction enzyme digest (subcloning), including design and experimental...window) New England Biolabs for more information about restriction enzyme buffers). If you select enzymes...
Showing: 381 - 400 of 407 results