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  1. Viral Vectors 101: Preparing Pooled Libraries

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    Blog Post
    ...HEK cells allows production of lentivirus. Purification of this lentivirus results in the pooled library...our protocol on Lentivirus Production provides a general approach for producing lentivirus in Lenti-X 293T... need to worry about amplifying and producing lentivirus. But pre-made libraries aren’t quite plug-and-play...transduce your cells.  Titering After generating your lentivirus, you’ll want to infect your cells with the virus–the... received your pre-made library/produced your lentivirus. Since viruses are sensitive to freeze/thaw cycles...
  2. Viral Vectors 101: Viruses as Biological Tools

    Type
    Blog Post
    ... Viral Vector Pages Learn About Viral Vector Biosafety Deposit Your Viral Vectors ... Viruses are essentially DNA (or RNA) delivery vectors, so what makes them better than the alternatives...measures in a separate, upcoming post. If a viral vector seems like the right approach for your experiment...viruses used in mammalian research: 𝛄-retrovirus, lentivirus, adenovirus, and adeno-associated virus (AAV)...mitosis. The most well-known retrovirus is HIV. Lentiviruses are a genus of the retroviral family that can...Immunogenicity Insertional Mutagenesis Possible Lentivirus Infects non-dividing cells Insertional...experiment?           Click Here to Find Viral Vector Resources at Addgene! References and Resources...
  3. Making CRISPR Plasmids Using Fragmid

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    Blog Post
    ...modular vector assembly process designed for a quick, plug-and-play approach to cloning CRISPR vectors (McGee...for each module, generate the vector file, and quickly clone their vector of interest. And it truly is ...destination vectors for various delivery methods, along with compatible inserts. All destination vectors contain...heavy lifting out of CRISPR vector design, making it easier to get the vectors that are just right for your...Fragmid destination vectors currently available. Table 1: Fragmid destination vectors Organism Delivery...Delivery Type Destination Vector Mammalian Lentivirus pRDA_512 (RSV-driven; lentiGuide-based...designing a CRISPR vector the Fragmid way!    Figure 1: Selecting your vector type on the Fragmid...
  4. Viral Vectors 101: Transductions

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    Blog Post
    ...Production at Addgene Viral Vectors 101: What is a Virus? Viral Vectors 101: Viral Vector Elements ..., a viral vector is selected to perform the transduction with: either retrovirus, lentivirus, adenovirus...desired DNA to be integrated can be cloned into the vector that you have selected. The nucleic acid will be...produced, and viral particles are packaged, when the vector is expressed. Once the design and construction ... it’s time to make virus! The constructed viral vector containing the cargo of interest is then typically...layers of risk management when working with viral vectors. Typically, one day after transfection into the...variety of broadly applicable and popular viral vectors. Check out our viral selections to see if we have...
  5. How Dry Ice Affects Viral Vector Sample pH & How to Avoid It

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    Blog Post
    ...different types of tubes: the ones we use to store lentivirus and the ones we use to store AAV. Our results...effect on the pH of the samples stored in our lentivirus tubes (Fig. 1). However, once thawed, there was...protocol for recombinant adeno-associated virus vectors. Mol Ther Methods Clin Dev. 2014 Aug 13;1:14034... 1st Time CRISPR User) Tips for Titering Your Lentivirus Preps Additional Resources on Addgene.org Check...Find Virus Protocols Browse Our Viral Vectors ... lentivirus...
  6. Genome-wide Screening Using CRISPR

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    Blog Post
    ...generate lentivirus (B). Cas9-expressing cells or wild-type cells are treated with lentivirus containing... Quick Guide to All Things Lentivirus Get Tips on Titering Your Lentivirus Plasmids 101: NGS Quality Control...genome wide-screening experiments commonly use lentivirus to deliver a pooled population of gRNAs to Cas9...population of gRNA-containing lentiviral transfer vectors, each targeting a specific gene within the genome...gRNAs are then cloned into lentiviral transfer vectors to create the CRISPR library. CRISPR libraries ... concentration that is sufficient to generate lentivirus. Be sure to use next-generation sequencing to...the steps above! Cells are then transduced with lentivirus containing the CRISPR library to generate a heterogeneous...
  7. Multiplex Genome Editing with CRISPR-Cpf1

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    Blog Post
    ...expression vectors which are often more difficult to transfect or package into viral vectors. Cas9 multiplexing...Cpf1 multiplex system from a lentiviral vector.  Lentiviruses carry a (+) strand RNA copy of the DNA sequence... 1) Most rely on transfection of more than one vector to express the gRNAs and Cas9. Co-transfections...multiplexing vectors are larger because they require regulatory sequences to allow for expression of multiple...Yamamoto Lab Golden Gate Assembly transfection One vector expresses Cas9 and up to 7 gRNAs Each gRNA requires...Expression Cassettes lentiviral transduction One vector expresses Cas9, eGFP, and up to 4 gRNAs Each gRNA... options for Cpf1 multiplexing: Transfection, lentivirus, and AAV Cpf1’s ability to process its own pre-crRNA...
  8. Viral Production at Addgene

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    Blog Post
    ... with viral vector manufacturing facilities, such as the University of Pennsylvania Vector Core. Transfections...Pennsylvania Vector Core. In general, titering is performed by the facility that produced the viral vector lot....Empty vector particles can be identified after negative staining and appear darker than full vector particles...Electron micrograph of AAV vector preparation shows that the vast majority of the vectors consist of full particles...our virus protocols. Browse our AAV vector collection. Lentivirus Production Lentiviral preparations ...to determine which facility produced your viral vector lot. At Addgene, AAV particles are titered by droplet...method.  Titering by the University of Pennsylvania Vector Core is (as of April 2016) also performed by ddPCR...
  9. New Tools Enable CRISPRa for Neuroscience Applications

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    Blog Post
    ...Neuron-optimized viral vectors Alternatively, Cas9 activators can be delivered to the CNS by lentivirus, which has...lentiviral vectors for in vitro and in vivo CRISPRa (Savell et al., 2019). This dual lentivirus system pairs...including transgenic mice, neuron-optimized viral vectors, and high-throughput screening approaches. Here...largely precludes delivery by adeno-associated vectors (AAV). This issue was recently circumvented by ... ubiquitous expression of sgRNA(s) and mCherry (vector 1) with neuron-specific expression of dCas9-VPR... such as EF-1α and CAG. Figure 2: Dual lentivirus system with ubiquitous expression of sgRNA (top...BioRender.com. The Day Lab used their optimized vectors to highlight a key advantage of CRISPRa over traditional...
  10. Viral Vectors 101: The AAV Retrograde Serotype

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    Blog Post
    ...-dependent vectors, this can cause challenges for the experimental design as these vectors can exhibit...your system. Chemogenetic vectors  Expression of retrograde serotype vectors is present at both the injection...serotype to conduct experiments with chemogenetic vectors, this property must be taken into account since...projection neurons retrogradely transduced by the vector. One method for minimizing the impact of this phenomenon...phenomenon is to use a retrograde recombinase-expressing vector (e.g. Cre or FLP) to transduce the projection pathway...then inject a recombinase-dependent chemogenetic vector directly into the region where the cell bodies ...Addgene Blog Get Started with AAV Learn more about Lentivirus Find out More about Addgene's Viral Service ...
Showing: 21 - 30 of 99 results